RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 STPG3Q8N7X2 389 aa9.21□□□□□ -0.94
SGCA-202ENST00000344627 CCDC59Q9P031 241 aaKnown RBP9.21□□□□□ -0.94
SGCA-202ENST00000344627 CXorf65A6NEN9 183 aa9.2□□□□□ -0.94
SGCA-202ENST00000344627 DNASE2O00115 360 aaPredicted RBP9.2□□□□□ -0.94
SGCA-202ENST00000344627 CORTO00230 105 aa9.2□□□□□ -0.94
SGCA-202ENST00000344627 B3GALNT1O75752 331 aa9.2□□□□□ -0.94
SGCA-202ENST00000344627 OR5AC1P0C628 307 aa9.2□□□□□ -0.94
SGCA-202ENST00000344627 AKAIN1P0CW23 69 aa9.2□□□□□ -0.94
SGCA-202ENST00000344627 UCP1P25874 307 aa9.2□□□□□ -0.94
SGCA-202ENST00000344627 OPRK1P41145 380 aa9.2□□□□□ -0.94
SGCA-202ENST00000344627 SSBP1Q04837 148 aaKnown RBP9.2□□□□□ -0.94
SGCA-202ENST00000344627 CEMP1Q6PRD7 247 aaPredicted RBP9.2□□□□□ -0.94
SGCA-202ENST00000344627 TOMM20LQ6UXN7 152 aa9.2□□□□□ -0.94
SGCA-202ENST00000344627 TCF24Q7RTU0 167 aa9.2□□□□□ -0.94
SGCA-202ENST00000344627 GALNT14Q96FL9 552 aa9.2□□□□□ -0.94
SGCA-202ENST00000344627 OR10C1Q96KK4 312 aa9.2□□□□□ -0.94
SGCA-202ENST00000344627 PUS1Q9Y606 427 aaKnown RBP eCLIP9.2□□□□□ -0.94
SGCA-202ENST00000344627 HYDINQ4G0P3 5121 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 A0A0G2JRQ6 117 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 A0A0J9YWU9 116 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 SCGB2A1O75556 95 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 TMEM50AO95807 157 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 P0C879 139 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 RNASE2P10153 161 aaKnown RBP9.19□□□□□ -0.94
SGCA-202ENST00000344627 DHODHQ02127 395 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 MLANAQ16655 118 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 ZNF600Q6ZNG1 722 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 OR4C16Q8NGL9 310 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 SMIM4Q8WVI0 70 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 ST8SIA2Q92186 375 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 TMEM230Q96A57 120 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 RNF183Q96D59 192 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 RTBDNQ9BSG5 229 aaPredicted RBP9.19□□□□□ -0.94
SGCA-202ENST00000344627 TMEM222Q9H0R3 208 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 NAA60Q9H7X0 242 aa9.19□□□□□ -0.94
SGCA-202ENST00000344627 HEYLQ9NQ87 328 aaPredicted RBP9.19□□□□□ -0.94
SGCA-202ENST00000344627 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.19□□□□□ -0.94
SGCA-202ENST00000344627 CEBPZOSA8MTT3 80 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 LY6G6CO95867 125 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 APOHP02749 345 aaPredicted RBP9.18□□□□□ -0.94
SGCA-202ENST00000344627 TCTAP57738 103 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 SPCS3P61009 180 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 ZNF124Q15973 351 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 TMEM268Q5VZI3 342 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 Q6ZRM9 215 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 LYG2Q86SG7 212 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 SELENOHQ8IZQ5 122 aaKnown RBP9.18□□□□□ -0.94
SGCA-202ENST00000344627 OR51S1Q8NGJ8 323 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 DYNC2LI1Q8TCX1 351 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 GATAD1Q8WUU5 269 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 RBPMSQ93062 196 aaKnown RBP9.18□□□□□ -0.94
SGCA-202ENST00000344627 ZNF414Q96IQ9 312 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 PRRT1Q99946 306 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 MFFQ9GZY8 342 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 TMEM231Q9H6L2 316 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 MCUBQ9NWR8 336 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 CACNG5Q9UF02 275 aa9.18□□□□□ -0.94
SGCA-202ENST00000344627 RPS10-NUDT3A0A1W2PQS6 291 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 INS-IGF2F8WCM5 200 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 CTDSPLO15194 276 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 DFFBO76075 338 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 NXPH3O95157 252 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 CDS2O95674 445 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 NPPCP23582 126 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 HTR2BP41595 481 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 FAM219AQ8IW50 185 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 LHFPL5Q8TAF8 219 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 GLYATL2Q8WU03 294 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 GPR146Q96CH1 333 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 NARS2Q96I59 477 aaKnown RBP9.17□□□□□ -0.94
SGCA-202ENST00000344627 METTL26Q96S19 204 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 CSTL1Q9H114 145 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 MAP6D1Q9H9H5 199 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 RABL2AQ9UBK7 228 aaPredicted RBP9.17□□□□□ -0.94
SGCA-202ENST00000344627 RABAC1Q9UI14 185 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 SCP2D1Q9UJQ7 156 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 RABL2BQ9UNT1 228 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 KCNIP3Q9Y2W7 256 aa9.17□□□□□ -0.94
SGCA-202ENST00000344627 A0A1B0GU03 582 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 A0A1W2PS18 150 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 ANKRD20A5PA0PJZ0 165 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 FABP12A6NFH5 140 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 CRYM-AS1A6NIL9 109 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 MPTX1A8MV57 137 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 CLN5O75503 358 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 AKR1C4P17516 323 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 S100A5P33763 92 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 SURF2Q15527 256 aaPredicted RBP9.16□□□□□ -0.94
SGCA-202ENST00000344627 TIGITQ495A1 244 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 FAM90A2PQ658T7 463 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 LINC00299Q6ZSB3 139 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 LILRB2Q8N423 598 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 OR4X1Q8NH49 305 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 MCFD2Q8NI22 146 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 SCGB3A2Q96PL1 93 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 MS4A6AQ9H2W1 248 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 FNDC4Q9H6D8 234 aaPredicted RBP9.16□□□□□ -0.94
SGCA-202ENST00000344627 PRR13Q9NZ81 148 aa9.16□□□□□ -0.94
SGCA-202ENST00000344627 MRPL36Q9P0J6 103 aaKnown RBP9.16□□□□□ -0.94
SGCA-202ENST00000344627 GPR132Q9UNW8 380 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms