RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 NDUFAF3Q9BU61 184 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 PATZ1Q9HBE1 687 aaKnown RBP8.76□□□□□ -1.01
RTN3-201ENST00000338850 FZR1Q9UM11 496 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 OR51B2Q9Y5P1 312 aa8.76□□□□□ -1.01
RTN3-201ENST00000338850 FN1P02751 2386 aaKnown RBP8.76□□□□□ -1.01
RTN3-201ENST00000338850 PRR14LQ5THK1 2151 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 TLN2Q9Y4G6 2542 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 A0A087X0M5 115 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 KIR2DL5BA0A0G2JN68 375 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 KIR2DL5BA0A0G2JPC4 375 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 A0A0U1RQK1 487 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.75□□□□□ -1.01
RTN3-201ENST00000338850 A0A1B0GX30 115 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 SCO2A0A1W2PP80 73 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 ZNF320A2RRD8 509 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 J3QR06 171 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 M0R1B8 84 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 APOA2P02652 100 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 TFF1P04155 84 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 USF1P22415 310 aaPredicted RBP8.75□□□□□ -1.01
RTN3-201ENST00000338850 ZNF83P51522 516 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 LGALS4P56470 323 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 LINC00205P59089 165 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 RPL31P62899 125 aaKnown RBP8.75□□□□□ -1.01
RTN3-201ENST00000338850 CD69Q07108 199 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 PDZD11Q5EBL8 140 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 RASL11AQ6T310 242 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 Q71RC1 249 aaPredicted RBP8.75□□□□□ -1.01
RTN3-201ENST00000338850 LRP11Q86VZ4 500 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 PDPNQ86YL7 162 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 KIR2DL5AQ8N109 375 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 OR5AN1Q8NGI8 311 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 IGFBPL1Q8WX77 278 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 SMIM12Q96EX1 92 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 GNB1LQ9BYB4 327 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 SLC35D1Q9NTN3 355 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 YTHDF2Q9Y5A9 579 aaKnown RBP8.75□□□□□ -1.01
RTN3-201ENST00000338850 DYSFO75923 2080 aa8.75□□□□□ -1.01
RTN3-201ENST00000338850 ISLRO14498 428 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 CT45A6P0DMU7 189 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 CT45A5P0DMU8 189 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 CT45A7P0DMV0 189 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 RNASE2P10153 161 aaKnown RBP8.74□□□□□ -1.01
RTN3-201ENST00000338850 IRF2P14316 349 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 CD40P25942 277 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 TAS2R60P59551 318 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 UBE2G2P60604 165 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 RANP62826 216 aaKnown RBP8.74□□□□□ -1.01
RTN3-201ENST00000338850 PVRIGQ6DKI7 326 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 PRSS57Q6UWY2 283 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 C1orf229Q6ZS94 237 aaPredicted RBP8.74□□□□□ -1.01
RTN3-201ENST00000338850 LYG1Q8N1E2 194 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 CIARTQ8N365 385 aaPredicted RBP8.74□□□□□ -1.01
RTN3-201ENST00000338850 ZNF114Q8NC26 417 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 OCC1Q8TAD7 63 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 TMEM167AQ8TBQ9 72 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 PERPQ96FX8 193 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 Q96MF0 132 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 NABP2Q9BQ15 211 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 DERL1Q9BUN8 251 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 COMMD5Q9GZQ3 224 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 JMJD1CQ15652 2540 aa8.74□□□□□ -1.01
RTN3-201ENST00000338850 CSPG4Q6UVK1 2322 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 IGHV3OR15-7A0A075B7D8 119 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 TRBV23-1A0A0A0MS06 115 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 PSMB11A5LHX3 300 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 SPRY3O43610 288 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 FSTL3O95633 263 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 LY6G6DO95868 133 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 PLAUP00749 431 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 LTC4SQ16873 150 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 RPEL1Q2QD12 228 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 HLA-DRB5Q30154 266 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 FAM231DQ6ZW35 169 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 WFDC8Q8IUA0 241 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 MRPL41Q8IXM3 137 aaKnown RBP8.73□□□□□ -1.01
RTN3-201ENST00000338850 THAP8Q8NA92 274 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 TMEM37Q8WXS4 190 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 TMEM186Q96B77 213 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 PLPPR2Q96GM1 343 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 SEPSECSQ9HD40 501 aaKnown RBP8.73□□□□□ -1.01
RTN3-201ENST00000338850 NDUFA4L2Q9NRX3 87 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 V9GYV3 84 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 ZANQ9Y493 2812 aa8.73□□□□□ -1.01
RTN3-201ENST00000338850 VPS13CQ709C8 3753 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 TEX50A0A1B0GTY4 177 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 REG1AP05451 166 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 C8orf88P0DMB2 117 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 DEFA4P12838 97 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 OR10J1P30954 320 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 TPPP2P59282 170 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 RPS16P62249 146 aaKnown RBP8.72□□□□□ -1.01
RTN3-201ENST00000338850 CX3CL1P78423 397 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 ERHP84090 104 aaKnown RBP8.72□□□□□ -1.01
RTN3-201ENST00000338850 HOXA4Q00056 320 aaPredicted RBP8.72□□□□□ -1.01
RTN3-201ENST00000338850 SPRNQ5BIV9 151 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 OR10J3Q5JRS4 329 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 C1orf194Q5T5A4 169 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 TMEM108Q6UXF1 575 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 ZNF600Q6ZNG1 722 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms