RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 RAB11AP62491 216 aa13.52□□□□□ -0.25
CHGA-202ENST00000334654 RUNX1Q01196 453 aa13.52□□□□□ -0.25
CHGA-202ENST00000334654 CD69Q07108 199 aa13.52□□□□□ -0.25
CHGA-202ENST00000334654 EXOSC2Q13868 293 aaKnown RBP13.52□□□□□ -0.25
CHGA-202ENST00000334654 NDUFA11Q86Y39 141 aa13.52□□□□□ -0.25
CHGA-202ENST00000334654 OR5B12Q96R08 314 aa13.52□□□□□ -0.25
CHGA-202ENST00000334654 A0A1W2PRX2 142 aa13.51□□□□□ -0.25
CHGA-202ENST00000334654 LGALS1P09382 135 aaKnown RBP13.51□□□□□ -0.25
CHGA-202ENST00000334654 OR8U8P0C7N1 319 aa13.51□□□□□ -0.25
CHGA-202ENST00000334654 CAV2P51636 162 aa13.51□□□□□ -0.25
CHGA-202ENST00000334654 KHDC1LQ5JSQ8 128 aa13.51□□□□□ -0.25
CHGA-202ENST00000334654 C4orf3Q8WVX3 66 aa13.51□□□□□ -0.25
CHGA-202ENST00000334654 CXorf58Q96LI9 332 aa13.51□□□□□ -0.25
CHGA-202ENST00000334654 PAIP2BQ9ULR5 123 aaKnown RBP13.51□□□□□ -0.25
CHGA-202ENST00000334654 WNK1Q9H4A3 2382 aa13.51□□□□□ -0.25
CHGA-202ENST00000334654 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.5□□□□□ -0.25
CHGA-202ENST00000334654 TRBV12-3P01733 135 aa13.5□□□□□ -0.25
CHGA-202ENST00000334654 OPRK1P41145 380 aa13.5□□□□□ -0.25
CHGA-202ENST00000334654 KLHL30-AS1Q8NEE0 82 aa13.5□□□□□ -0.25
CHGA-202ENST00000334654 THAP6Q8TBB0 222 aa13.5□□□□□ -0.25
CHGA-202ENST00000334654 EEF1AKMT3Q96AZ1 226 aa13.5□□□□□ -0.25
CHGA-202ENST00000334654 C21orf62Q9NYP8 219 aa13.5□□□□□ -0.25
CHGA-202ENST00000334654 TRBV7-1A0A0A6YYK4 115 aa13.49□□□□□ -0.25
CHGA-202ENST00000334654 CST7O76096 145 aa13.49□□□□□ -0.25
CHGA-202ENST00000334654 FCGR2BP31994 310 aaPredicted RBP13.49□□□□□ -0.25
CHGA-202ENST00000334654 GPX4P36969 197 aaPredicted RBP13.49□□□□□ -0.25
CHGA-202ENST00000334654 NSUN5P1Q3KNT7 163 aa13.49□□□□□ -0.25
CHGA-202ENST00000334654 OR8G2PQ6IF36 304 aa13.49□□□□□ -0.25
CHGA-202ENST00000334654 SHISA2Q6UWI4 295 aa13.49□□□□□ -0.25
CHGA-202ENST00000334654 C8orf86Q6ZUL3 223 aa13.49□□□□□ -0.25
CHGA-202ENST00000334654 BSCL2Q96G97 398 aaPredicted RBP13.49□□□□□ -0.25
CHGA-202ENST00000334654 CLEC3BP05452 202 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 SULT1A1P50225 295 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 NHLH2Q02577 135 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 GAMTQ14353 236 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 DEFB136Q30KP8 78 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 CLEC19AQ6UXS0 136 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 SLC16A13Q7RTY0 426 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 TMEM116Q8NCL8 245 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 OR11H4Q8NGC9 324 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 CACNG8Q8WXS5 425 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 ZNF414Q96IQ9 312 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 ANK2Q01484 3957 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 ANKRD34BA5PLL1 514 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 MFAP4P55083 255 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 EWSR1Q01844 656 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHGA-202ENST00000334654 ZNF546Q86UE3 836 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 OR10P1Q8NGE3 313 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 OR4X1Q8NH49 305 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 DCUN1D4Q92564 292 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 RAX2Q96IS3 184 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 ATP6V0BQ99437 205 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 TXN2Q99757 166 aa13.48□□□□□ -0.25
CHGA-202ENST00000334654 PEF1Q9UBV8 284 aaKnown RBP13.48□□□□□ -0.25
CHGA-202ENST00000334654 IGHV4OR15-8A0A075B7B6 117 aa13.47□□□□□ -0.25
CHGA-202ENST00000334654 A0A087WW49 117 aa13.47□□□□□ -0.25
CHGA-202ENST00000334654 A0A0D9SG52 128 aa13.47□□□□□ -0.25
CHGA-202ENST00000334654 RPS10-NUDT3A0A1W2PQS6 291 aa13.47□□□□□ -0.25
CHGA-202ENST00000334654 NUDT19A8MXV4 375 aa13.47□□□□□ -0.25
CHGA-202ENST00000334654 BMPR1BO00238 502 aa13.47□□□□□ -0.25
CHGA-202ENST00000334654 CTSGP08311 255 aa13.47□□□□□ -0.25
CHGA-202ENST00000334654 RPL12P30050 165 aaKnown RBP13.47□□□□□ -0.25
CHGA-202ENST00000334654 ADMP35318 185 aa13.47□□□□□ -0.25
CHGA-202ENST00000334654 ZNF345Q14585 488 aa13.47□□□□□ -0.25
CHGA-202ENST00000334654 ETFRF1Q6IPR1 90 aa13.47□□□□□ -0.25
CHGA-202ENST00000334654 ACSM6Q6P461 480 aa13.47□□□□□ -0.25
CHGA-202ENST00000334654 ACOT7LQ6ZUV0 252 aa13.47□□□□□ -0.25
CHGA-202ENST00000334654 C9orf62Q8N4C0 152 aa13.47□□□□□ -0.25
CHGA-202ENST00000334654 DUX3Q96PT4 197 aa13.47□□□□□ -0.25
CHGA-202ENST00000334654 SLC25A31Q9H0C2 315 aa13.47□□□□□ -0.25
CHGA-202ENST00000334654 OR2T8A6NH00 312 aa13.46□□□□□ -0.25
CHGA-202ENST00000334654 PPP5D1E7EU14 171 aa13.46□□□□□ -0.25
CHGA-202ENST00000334654 GPR183P32249 361 aa13.46□□□□□ -0.25
CHGA-202ENST00000334654 RND2P52198 227 aa13.46□□□□□ -0.25
CHGA-202ENST00000334654 NKX2-5P52952 324 aaPredicted RBP13.46□□□□□ -0.25
CHGA-202ENST00000334654 DLK1P80370 383 aa13.46□□□□□ -0.25
CHGA-202ENST00000334654 OR2F1Q13607 317 aa13.46□□□□□ -0.25
CHGA-202ENST00000334654 LAMTOR1Q6IAA8 161 aa13.46□□□□□ -0.25
CHGA-202ENST00000334654 TMEM217Q8N7C4 229 aa13.46□□□□□ -0.25
CHGA-202ENST00000334654 OR11H1Q8NG94 326 aa13.46□□□□□ -0.25
CHGA-202ENST00000334654 NPIPB3Q92617 1050 aa13.46□□□□□ -0.25
CHGA-202ENST00000334654 CHRDL1Q9BU40 450 aa13.46□□□□□ -0.25
CHGA-202ENST00000334654 TNFSF18Q9UNG2 199 aa13.46□□□□□ -0.25
CHGA-202ENST00000334654 HSPB11Q9Y547 144 aa13.46□□□□□ -0.25
CHGA-202ENST00000334654 TRRAPQ9Y4A5 3859 aa13.46□□□□□ -0.26
CHGA-202ENST00000334654 IGKV1OR2-108A0A075B7D4 117 aa13.45□□□□□ -0.26
CHGA-202ENST00000334654 FXYD6-FXYD2A0A087WZ82 144 aa13.45□□□□□ -0.26
CHGA-202ENST00000334654 RNF222A6NCQ9 220 aa13.45□□□□□ -0.26
CHGA-202ENST00000334654 CLN5O75503 358 aa13.45□□□□□ -0.26
CHGA-202ENST00000334654 HSPB1P04792 205 aaKnown RBP13.45□□□□□ -0.26
CHGA-202ENST00000334654 SLC38A11Q08AI6 406 aa13.45□□□□□ -0.26
CHGA-202ENST00000334654 FHL3Q13643 280 aa13.45□□□□□ -0.26
CHGA-202ENST00000334654 LGALSLQ3ZCW2 172 aaPredicted RBP13.45□□□□□ -0.26
CHGA-202ENST00000334654 UBAC2Q8NBM4 344 aa13.45□□□□□ -0.26
CHGA-202ENST00000334654 INO80EQ8NBZ0 244 aaPredicted RBP13.45□□□□□ -0.26
CHGA-202ENST00000334654 AQP10Q96PS8 301 aa13.45□□□□□ -0.26
CHGA-202ENST00000334654 IGKV1D-37A0A075B6S9 117 aa13.44□□□□□ -0.26
CHGA-202ENST00000334654 FNDC10F2Z333 226 aa13.44□□□□□ -0.26
CHGA-202ENST00000334654 TGOLN2O43493 480 aa13.44□□□□□ -0.26
CHGA-202ENST00000334654 NUP62P37198 522 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms