RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 Q6ZRM9 215 aa10.71□□□□□ -0.69
VSTM4-202ENST00000332853 C1orf147Q96MC9 270 aaPredicted RBP10.71□□□□□ -0.69
VSTM4-202ENST00000332853 GGCTO75223 188 aaKnown RBP10.71□□□□□ -0.69
VSTM4-202ENST00000332853 CD69Q07108 199 aa10.71□□□□□ -0.69
VSTM4-202ENST00000332853 ADIPOQQ15848 244 aa10.71□□□□□ -0.69
VSTM4-202ENST00000332853 NUP37Q8NFH4 326 aa10.71□□□□□ -0.69
VSTM4-202ENST00000332853 REG4Q9BYZ8 158 aa10.71□□□□□ -0.69
VSTM4-202ENST00000332853 ACACAQ13085 2346 aa10.71□□□□□ -0.7
VSTM4-202ENST00000332853 HBBP68871 147 aa10.71□□□□□ -0.7
VSTM4-202ENST00000332853 FAM74A4Q5TZK3 123 aa10.71□□□□□ -0.7
VSTM4-202ENST00000332853 VMO1Q7Z5L0 202 aa10.71□□□□□ -0.7
VSTM4-202ENST00000332853 KIAA1549LQ6ZVL6 1849 aa10.71□□□□□ -0.7
VSTM4-202ENST00000332853 AP5S1Q9NUS5 200 aa10.71□□□□□ -0.7
VSTM4-202ENST00000332853 TCRBV4S1A1TA0A5B7 111 aa10.7□□□□□ -0.7
VSTM4-202ENST00000332853 HEPN1Q6WQI6 88 aa10.7□□□□□ -0.7
VSTM4-202ENST00000332853 NUDT3O95989 172 aa10.7□□□□□ -0.7
VSTM4-202ENST00000332853 WDR86Q86TI4 376 aa10.7□□□□□ -0.7
VSTM4-202ENST00000332853 WDR83OSQ9Y284 106 aa10.7□□□□□ -0.7
VSTM4-202ENST00000332853 ZNF25P17030 456 aaPredicted RBP10.7□□□□□ -0.7
VSTM4-202ENST00000332853 TRBV6-6A0A0A6YYG2 114 aa10.7□□□□□ -0.7
VSTM4-202ENST00000332853 TMEM183AQ8IXX5 376 aa10.7□□□□□ -0.7
VSTM4-202ENST00000332853 MGST2Q99735 147 aa10.7□□□□□ -0.7
VSTM4-202ENST00000332853 A0A087WWC5 75 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 TRAV40A0A0B4J280 105 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 MAP1LC3AQ9H492 121 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 ZFP30Q9Y2G7 519 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 SNCGO76070 127 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 CFPP27918 469 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 C1QL4Q86Z23 238 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 GGTLC1Q9BX51 225 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 RPLP1P05386 114 aaKnown RBP10.69□□□□□ -0.7
VSTM4-202ENST00000332853 DUX4L9Q6RFH8 374 aaPredicted RBP10.69□□□□□ -0.7
VSTM4-202ENST00000332853 TMEM219Q86XT9 240 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 ZNF502Q8TBZ5 544 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 LIME1Q9H400 295 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 COL6A6A6NMZ7 2263 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 CD5P06127 495 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 UQCRFS1P47985 274 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 HINT1P49773 126 aaPredicted RBP10.69□□□□□ -0.7
VSTM4-202ENST00000332853 IGHV1-3A0A0C4DH29 117 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 E7EQL1 145 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 WNT2P09544 360 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 RPS20P60866 119 aaKnown RBP10.69□□□□□ -0.7
VSTM4-202ENST00000332853 PRR31Q5SQ13 230 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 FMC1Q96HJ9 113 aa10.69□□□□□ -0.7
VSTM4-202ENST00000332853 CA7P43166 264 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 HERVK_113P61574 105 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 Q6ZR03 302 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 OCC1Q8TAD7 63 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 DCAF16Q9NXF7 216 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 FAM90A9PA6NNJ1 464 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 TRBV9A0A0B4J1U6 114 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 SRSF9Q13242 221 aaKnown RBP eCLIP10.68□□□□□ -0.7
VSTM4-202ENST00000332853 GLMPQ8WWB7 406 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 RPP21Q9H633 154 aaKnown RBP10.68□□□□□ -0.7
VSTM4-202ENST00000332853 CDC42EP3Q9UKI2 254 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 ROS1P08922 2347 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 A0A1W2PRX2 142 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 TNFSF13O75888 250 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 RAB9AP51151 201 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 SYT8Q8NBV8 401 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 SSBP4Q9BWG4 385 aaPredicted RBP10.68□□□□□ -0.7
VSTM4-202ENST00000332853 H0YJW9 148 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 CA1P00915 261 aaPredicted RBP10.68□□□□□ -0.7
VSTM4-202ENST00000332853 TCF24Q7RTU0 167 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 RNF125Q96EQ8 232 aa10.68□□□□□ -0.7
VSTM4-202ENST00000332853 SEPSECSQ9HD40 501 aaKnown RBP10.68□□□□□ -0.7
VSTM4-202ENST00000332853 ADAMTS9Q9P2N4 1935 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 HIGD1CA8MV81 97 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 RHOGP84095 191 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 SLC25A48Q6ZT89 311 aaKnown RBP10.67□□□□□ -0.7
VSTM4-202ENST00000332853 RPP25LQ8N5L8 163 aaKnown RBP10.67□□□□□ -0.7
VSTM4-202ENST00000332853 MLANAQ16655 118 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 SAPCD1Q5SSQ6 148 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 FAM19A2Q8N3H0 131 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 GPR82Q96P67 336 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 M0R381 172 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 IGKV1-16P04430 117 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 DLX1P56177 255 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 KLF17Q5JT82 389 aaPredicted RBP10.67□□□□□ -0.7
VSTM4-202ENST00000332853 MBD3L1Q8WWY6 194 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 DERL1Q9BUN8 251 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 C9JCJ5 164 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 ZNF585BQ52M93 769 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 DTX1Q86Y01 620 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 SOD3P08294 240 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 ADMP35318 185 aa10.67□□□□□ -0.7
VSTM4-202ENST00000332853 WIPF3A6NGB9 483 aa10.66□□□□□ -0.7
VSTM4-202ENST00000332853 TRBV20OR9-2A0A075B6H5 130 aa10.66□□□□□ -0.7
VSTM4-202ENST00000332853 SNRPD3P62318 126 aaKnown RBP10.66□□□□□ -0.7
VSTM4-202ENST00000332853 TMEM14EPQ6UXP3 125 aa10.66□□□□□ -0.7
VSTM4-202ENST00000332853 DDB2Q92466 427 aa10.66□□□□□ -0.7
VSTM4-202ENST00000332853 ZNF106Q9H2Y7 1883 aaKnown RBP10.66□□□□□ -0.7
VSTM4-202ENST00000332853 SRSF4Q08170 494 aaKnown RBP10.66□□□□□ -0.7
VSTM4-202ENST00000332853 UNQ6494/PRO21346Q6UXR6 183 aa10.66□□□□□ -0.7
VSTM4-202ENST00000332853 Q6ZS49 121 aa10.66□□□□□ -0.7
VSTM4-202ENST00000332853 EPDR1Q9UM22 224 aa10.66□□□□□ -0.7
VSTM4-202ENST00000332853 FOLR2P14207 255 aa10.66□□□□□ -0.7
VSTM4-202ENST00000332853 WT1P19544 449 aaPredicted RBP10.66□□□□□ -0.7
VSTM4-202ENST00000332853 PSMB2P49721 201 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms