RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 NAV3Q8IVL0 2385 aa11.71□□□□□ -0.54
TPM3-206ENST00000330188 A0A1W2PRE2 83 aa11.71□□□□□ -0.54
TPM3-206ENST00000330188 IGLC7A0M8Q6 106 aa11.71□□□□□ -0.54
TPM3-206ENST00000330188 HELTA6NFD8 242 aa11.71□□□□□ -0.54
TPM3-206ENST00000330188 SLC17A3O00476 420 aa11.71□□□□□ -0.54
TPM3-206ENST00000330188 FSTL3O95633 263 aa11.71□□□□□ -0.54
TPM3-206ENST00000330188 CRYGBP07316 175 aa11.71□□□□□ -0.54
TPM3-206ENST00000330188 CNTFRP26992 372 aa11.71□□□□□ -0.54
TPM3-206ENST00000330188 PRRX1P54821 245 aa11.71□□□□□ -0.54
TPM3-206ENST00000330188 ZNF672Q499Z4 452 aaPredicted RBP11.71□□□□□ -0.54
TPM3-206ENST00000330188 CENPWQ5EE01 88 aa11.71□□□□□ -0.54
TPM3-206ENST00000330188 CCL21O00585 134 aa11.7□□□□□ -0.54
TPM3-206ENST00000330188 GNG4P50150 75 aa11.7□□□□□ -0.54
TPM3-206ENST00000330188 CNN1P51911 297 aaKnown RBP11.7□□□□□ -0.54
TPM3-206ENST00000330188 ZNF90Q03938 601 aa11.7□□□□□ -0.54
TPM3-206ENST00000330188 DNLZQ5SXM8 178 aa11.7□□□□□ -0.54
TPM3-206ENST00000330188 PVRIGQ6DKI7 326 aa11.7□□□□□ -0.54
TPM3-206ENST00000330188 PATE2Q6UY27 113 aa11.7□□□□□ -0.54
TPM3-206ENST00000330188 MMD2Q8IY49 270 aa11.7□□□□□ -0.54
TPM3-206ENST00000330188 COX7A2P2O60397 106 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 SUMO1P63165 101 aaKnown RBP11.69□□□□□ -0.54
TPM3-206ENST00000330188 OR5I1Q13606 314 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 CDSNQ15517 529 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 OR5AU1Q8NGC0 362 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 OR1L4Q8NGR5 311 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 PFDN5Q99471 154 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 CLEC7AQ9BXN2 247 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 PLXNB1O43157 2135 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 PPIAL4CA0A0B4J2A2 164 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 IGHV1-3A0A0C4DH29 117 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 BUB1B-PAK6H3BSN5 160 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 PPIAL4GP0DN37 164 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 HIST1H1BP16401 226 aaKnown RBP11.69□□□□□ -0.54
TPM3-206ENST00000330188 RPL27AP46776 148 aaKnown RBP11.69□□□□□ -0.54
TPM3-206ENST00000330188 MFAP2P55001 183 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 UBE2L3P68036 154 aaKnown RBP11.69□□□□□ -0.54
TPM3-206ENST00000330188 TNXAQ16473 311 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 RUSC1-AS1Q66K80 236 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 ST6GALNAC3Q8NDV1 305 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 BEND2Q8NDZ0 799 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 COL25A1Q9BXS0 654 aaPredicted RBP11.69□□□□□ -0.54
TPM3-206ENST00000330188 PRDM13Q9H4Q3 707 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 ZNF355PQ9NSJ1 428 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 RAXQ9Y2V3 346 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 INSIG2Q9Y5U4 225 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 V9GYV3 84 aa11.69□□□□□ -0.54
TPM3-206ENST00000330188 TLN1Q9Y490 2541 aaKnown RBP11.69□□□□□ -0.54
TPM3-206ENST00000330188 TRAV9-1A0A075B6T8 112 aa11.68□□□□□ -0.54
TPM3-206ENST00000330188 RBP4P02753 201 aa11.68□□□□□ -0.54
TPM3-206ENST00000330188 CRYGCP07315 174 aa11.68□□□□□ -0.54
TPM3-206ENST00000330188 UCNP55089 124 aa11.68□□□□□ -0.54
TPM3-206ENST00000330188 YPEL3P61236 119 aaPredicted RBP11.68□□□□□ -0.54
TPM3-206ENST00000330188 SELENOTP62341 195 aa11.68□□□□□ -0.54
TPM3-206ENST00000330188 C10orf113Q5VZT2 155 aa11.68□□□□□ -0.54
TPM3-206ENST00000330188 HCP5Q6MZN7 132 aa11.68□□□□□ -0.54
TPM3-206ENST00000330188 C8orf46Q8TAG6 207 aa11.68□□□□□ -0.54
TPM3-206ENST00000330188 MALRD1Q5VYJ5 2156 aa11.68□□□□□ -0.54
TPM3-206ENST00000330188 RD3LP0DJH9 198 aa11.68□□□□□ -0.54
TPM3-206ENST00000330188 BPIFB3P59826 476 aa11.68□□□□□ -0.54
TPM3-206ENST00000330188 ERVFC1-1P60608 527 aa11.68□□□□□ -0.54
TPM3-206ENST00000330188 ADORA2A-AS1P86434 159 aa11.68□□□□□ -0.54
TPM3-206ENST00000330188 SIGLEC9Q9Y336 463 aa11.68□□□□□ -0.54
TPM3-206ENST00000330188 CEP295Q9C0D2 2601 aa11.67□□□□□ -0.54
TPM3-206ENST00000330188 C22orf46C9J442 243 aa11.67□□□□□ -0.54
TPM3-206ENST00000330188 PYYP10082 97 aa11.67□□□□□ -0.54
TPM3-206ENST00000330188 COX7A1P24310 79 aa11.67□□□□□ -0.54
TPM3-206ENST00000330188 LGALS4P56470 323 aa11.67□□□□□ -0.54
TPM3-206ENST00000330188 KLRB1Q12918 225 aa11.67□□□□□ -0.54
TPM3-206ENST00000330188 C19orf35Q6ZS72 473 aa11.67□□□□□ -0.54
TPM3-206ENST00000330188 MRPL41Q8IXM3 137 aaKnown RBP11.67□□□□□ -0.54
TPM3-206ENST00000330188 MISP3Q96FF7 219 aa11.67□□□□□ -0.54
TPM3-206ENST00000330188 IGF2BP2-AS1Q96M15 143 aa11.67□□□□□ -0.54
TPM3-206ENST00000330188 IGLV2-8P01709 118 aa11.66□□□□□ -0.54
TPM3-206ENST00000330188 ADMP35318 185 aa11.66□□□□□ -0.54
TPM3-206ENST00000330188 COMPP49747 757 aaPredicted RBP11.66□□□□□ -0.54
TPM3-206ENST00000330188 JOSD1Q15040 202 aaPredicted RBP11.66□□□□□ -0.54
TPM3-206ENST00000330188 ETFRF1Q6IPR1 90 aa11.66□□□□□ -0.54
TPM3-206ENST00000330188 PAXXQ9BUH6 204 aa11.66□□□□□ -0.54
TPM3-206ENST00000330188 MOSP00540 346 aa11.66□□□□□ -0.54
TPM3-206ENST00000330188 GCGP01275 180 aa11.66□□□□□ -0.54
TPM3-206ENST00000330188 RPEL1Q2QD12 228 aa11.66□□□□□ -0.54
TPM3-206ENST00000330188 TIGITQ495A1 244 aa11.66□□□□□ -0.54
TPM3-206ENST00000330188 OR8B3Q8NGG8 313 aa11.66□□□□□ -0.54
TPM3-206ENST00000330188 OR5R1Q8NH85 324 aa11.66□□□□□ -0.54
TPM3-206ENST00000330188 OR8B2Q96RD0 313 aa11.66□□□□□ -0.54
TPM3-206ENST00000330188 TNFRSF19Q9NS68 423 aa11.66□□□□□ -0.54
TPM3-206ENST00000330188 TRAV20A0A0B4J274 112 aa11.65□□□□□ -0.54
TPM3-206ENST00000330188 APELAP0DMC3 54 aa11.65□□□□□ -0.54
TPM3-206ENST00000330188 PPP1R27Q86WC6 154 aa11.65□□□□□ -0.54
TPM3-206ENST00000330188 LY6G5BQ8NDX9 201 aa11.65□□□□□ -0.54
TPM3-206ENST00000330188 RPEQ96AT9 228 aa11.65□□□□□ -0.54
TPM3-206ENST00000330188 RNASE7Q9H1E1 156 aaKnown RBP11.65□□□□□ -0.54
TPM3-206ENST00000330188 OSTCQ9NRP0 149 aa11.65□□□□□ -0.54
TPM3-206ENST00000330188 AMMECR1Q9Y4X0 333 aaPredicted RBP11.65□□□□□ -0.54
TPM3-206ENST00000330188 TEX22C9J3V5 150 aa11.65□□□□□ -0.55
TPM3-206ENST00000330188 LY6LH3BQJ8 138 aa11.65□□□□□ -0.55
TPM3-206ENST00000330188 CBLN1P23435 193 aa11.65□□□□□ -0.55
TPM3-206ENST00000330188 LINC00305Q7Z4B0 112 aa11.65□□□□□ -0.55
TPM3-206ENST00000330188 GBGT1Q8N5D6 347 aa11.65□□□□□ -0.55
TPM3-206ENST00000330188 TMEM18Q96B42 140 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms