RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 PATE1Q8WXA2 126 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 KIR2DL4Q99706 377 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 RTN4RQ9BZR6 473 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 MS4A5Q9H3V2 200 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 H7C1H1 209 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 PEX7O00628 323 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 DPM2O94777 84 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 PDE6HQ13956 83 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 PRSS53Q2L4Q9 553 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 KLF17Q5JT82 389 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-201ENST00000317147 TMEM230Q96A57 120 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 ZNF479Q96JC4 524 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 HARBI1Q96MB7 349 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 FAM234AQ9H0X4 552 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 SIGLEC8Q9NYZ4 499 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 HCFC2Q9Y5Z7 792 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 R4GN57 208 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 TMEM189A5PLL7 270 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 ZNF815PA8K554 130 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 CRYAAP02489 173 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 GPR6P46095 362 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-201ENST00000317147 SLC23A3Q6PIS1 610 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 NEGR1Q7Z3B1 354 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 OR4C13Q8NGP0 309 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 C11orf52Q96A22 123 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 MMP17Q9ULZ9 603 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 TMEM238C9JI98 176 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 QRFPP83859 136 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 TPTE2P1Q5T6R2 138 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 MOGAT3Q86VF5 341 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 VOPP1Q96AW1 172 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 FLYWCH2Q96CP2 140 aaKnown RBP3.82□□□□□ -1.8
CNOT1-201ENST00000317147 PFN1P07737 140 aaKnown RBP3.82□□□□□ -1.8
CNOT1-201ENST00000317147 ZNF818PQ6ZRF7 136 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 POLR3KQ9Y2Y1 108 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-201ENST00000317147 HIGD1CA8MV81 97 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 TM4SF4P48230 202 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 RPS16P62249 146 aaKnown RBP3.82□□□□□ -1.8
CNOT1-201ENST00000317147 FAM90A2PQ658T7 463 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 CENPVQ7Z7K6 275 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-201ENST00000317147 TMEM140Q9NV12 185 aa3.82□□□□□ -1.8
CNOT1-201ENST00000317147 LGALS4P56470 323 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 OR10J6PQ8NGY7 276 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 ZNF714Q96N38 554 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 LAMTOR3Q9UHA4 124 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 VPS13CQ709C8 3753 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 IGKV1D-42A0A075B6H8 117 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 IGKV1-8A0A0C4DH67 115 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 GRIFINA4D1Z8 144 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 H0Y8X5 98 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 FCGR3BO75015 233 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 NAPSAO96009 420 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 SNRPCP09234 159 aaKnown RBP3.81□□□□□ -1.8
CNOT1-201ENST00000317147 MRPS11P82912 194 aaKnown RBP3.81□□□□□ -1.8
CNOT1-201ENST00000317147 SRSF3P84103 164 aaKnown RBP3.81□□□□□ -1.8
CNOT1-201ENST00000317147 HOXA4Q00056 320 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-201ENST00000317147 SRSF2Q01130 221 aaKnown RBP3.81□□□□□ -1.8
CNOT1-201ENST00000317147 SYT8Q8NBV8 401 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 ZNF721Q8TF20 911 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 ZNF492Q9P255 531 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 LOC107984156A0A0G2JMH3 177 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 ZNF716A6NP11 495 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 EREGO14944 169 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 OR2J3O76001 311 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 KLF5Q13887 457 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-201ENST00000317147 LILRA6Q6PI73 481 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 CBLN3Q6UW01 205 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 ZNF562Q6V9R5 426 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 ARL17AQ8IVW1 177 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 DEFB125Q8N687 156 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 OR11H6Q8NGC7 330 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 CCL4L1Q8NHW4 92 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 TMEM54Q969K7 222 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 ZNF775Q96BV0 537 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-201ENST00000317147 SRSF8Q9BRL6 282 aaKnown RBP3.81□□□□□ -1.8
CNOT1-201ENST00000317147 WDR83OSQ9Y284 106 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 K7ESF4 209 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 HLA-DRB4P13762 266 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 DUSP2Q05923 314 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 SRSF1Q07955 248 aaKnown RBP eCLIP3.81□□□□□ -1.8
CNOT1-201ENST00000317147 CXorf66Q5JRM2 361 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-201ENST00000317147 MOB3BQ86TA1 216 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 C12orf76Q8N812 135 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-201ENST00000317147 GFI1Q99684 422 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 HLA-DRB4X5D2U9 266 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 A0A1W2PP11 408 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 COX8AP10176 69 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 LIFP15018 202 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 ADMP35318 185 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 C9orf50Q5SZB4 431 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 FER1L6-AS1Q8NA97 138 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 ASCL2Q99929 193 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 C1QTNF5Q9BXJ0 243 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 HES7Q9BYE0 225 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 GNB4Q9HAV0 340 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 OTORQ9NRC9 128 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 LTBP2Q14767 1821 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 A0A087WV48 116 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-201ENST00000317147 CRXO43186 299 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms