RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 WASHC3Q9Y3C0 194 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 ABCA12Q86UK0 2595 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 FOXH1O75593 365 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 ACTL6BO94805 426 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 FABP4P15090 132 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 MC5RP33032 325 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 REG1BP48304 166 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 EFNA4P52798 201 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 TMEM155Q4W5P6 130 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 PYY3Q5JQD4 70 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 ZNF841Q6ZN19 808 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 PQLC2Q6ZP29 291 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 MIR17HGQ75NE6 70 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 OR9G1Q8NH87 305 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 TIMD4Q96H15 378 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 RNF2Q99496 336 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 LY96Q9Y6Y9 160 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 APCP25054 2843 aa11.44□□□□□ -0.58
VRK3-201ENST00000316763 NDUFS7O75251 213 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 PSG5Q15238 335 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 VMA21Q3ZAQ7 101 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 ACTL10Q5JWF8 245 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 DNLZQ5SXM8 178 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 TGIF2LXQ8IUE1 241 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 OR10W1Q8NGF6 305 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 OR1P1Q8NH06 330 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 PFDN5Q99471 154 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 AURKAIP1Q9NWT8 199 aaPredicted RBP11.43□□□□□ -0.58
VRK3-201ENST00000316763 DMRT1Q9Y5R6 373 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 A0A087X0M5 115 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 A0A1B0GX30 115 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 XKRY2A2RUG3 117 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 C9JCJ5 164 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 OR5G3P0C626 314 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 ZNF137PP52743 207 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 DLX6P56179 175 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 HLA-DRB5Q30154 266 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 ZNF114Q8NC26 417 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 OR10G8Q8NGN5 311 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 OCC1Q8TAD7 63 aa11.43□□□□□ -0.58
VRK3-201ENST00000316763 RNASEH2CQ8TDP1 164 aaKnown RBP11.43□□□□□ -0.58
VRK3-201ENST00000316763 BAHCC1Q9P281 2608 aa11.42□□□□□ -0.58
VRK3-201ENST00000316763 TRBV23-1A0A0A0MS06 115 aa11.42□□□□□ -0.58
VRK3-201ENST00000316763 A0A0U1RQK1 487 aa11.42□□□□□ -0.58
VRK3-201ENST00000316763 ZNF320A2RRD8 509 aa11.42□□□□□ -0.58
VRK3-201ENST00000316763 LINC00587B1AMM8 73 aa11.42□□□□□ -0.58
VRK3-201ENST00000316763 COA6Q5JTJ3 125 aaKnown RBP11.42□□□□□ -0.58
VRK3-201ENST00000316763 MOB3BQ86TA1 216 aa11.42□□□□□ -0.58
VRK3-201ENST00000316763 MRPL41Q8IXM3 137 aaKnown RBP11.42□□□□□ -0.58
VRK3-201ENST00000316763 ST6GALNAC6Q969X2 333 aa11.42□□□□□ -0.58
VRK3-201ENST00000316763 PACRGQ96M98 296 aaPredicted RBP11.42□□□□□ -0.58
VRK3-201ENST00000316763 MRPL32Q9BYC8 188 aaKnown RBP11.42□□□□□ -0.58
VRK3-201ENST00000316763 TRBV20OR9-2A0A075B6H5 130 aa11.41□□□□□ -0.58
VRK3-201ENST00000316763 IGKV1OR2-108A0A075B7D4 117 aa11.41□□□□□ -0.58
VRK3-201ENST00000316763 PGPEP1LA6NFU8 196 aa11.41□□□□□ -0.58
VRK3-201ENST00000316763 OR7C2O60412 319 aa11.41□□□□□ -0.58
VRK3-201ENST00000316763 IGHV1-8P0DP01 117 aa11.41□□□□□ -0.58
VRK3-201ENST00000316763 LGALS7P47929 136 aa11.41□□□□□ -0.58
VRK3-201ENST00000316763 SGMS2Q8NHU3 365 aa11.41□□□□□ -0.58
VRK3-201ENST00000316763 TMEM37Q8WXS4 190 aa11.41□□□□□ -0.58
VRK3-201ENST00000316763 UNC79Q9P2D8 2635 aa11.41□□□□□ -0.58
VRK3-201ENST00000316763 POLQO75417 2590 aa11.41□□□□□ -0.58
VRK3-201ENST00000316763 TRAV9-1A0A075B6T8 112 aa11.41□□□□□ -0.58
VRK3-201ENST00000316763 TEX38Q6PEX7 206 aa11.41□□□□□ -0.58
VRK3-201ENST00000316763 HIST1H2BLQ99880 126 aa11.41□□□□□ -0.58
VRK3-201ENST00000316763 TRAPPC1Q9Y5R8 145 aa11.41□□□□□ -0.58
VRK3-201ENST00000316763 IGLV2-23P01705 113 aa11.4□□□□□ -0.58
VRK3-201ENST00000316763 C8orf88P0DMB2 117 aa11.4□□□□□ -0.58
VRK3-201ENST00000316763 MLANAQ16655 118 aa11.4□□□□□ -0.58
VRK3-201ENST00000316763 OR8B3Q8NGG8 313 aa11.4□□□□□ -0.58
VRK3-201ENST00000316763 TNFRSF14Q92956 283 aa11.4□□□□□ -0.58
VRK3-201ENST00000316763 OR8B2Q96RD0 313 aa11.4□□□□□ -0.58
VRK3-201ENST00000316763 TMEM133Q9H2Q1 129 aa11.4□□□□□ -0.58
VRK3-201ENST00000316763 ZNF430Q9H8G1 570 aaPredicted RBP11.4□□□□□ -0.58
VRK3-201ENST00000316763 HELTA6NFD8 242 aa11.39□□□□□ -0.59
VRK3-201ENST00000316763 HNF1AP20823 631 aa11.39□□□□□ -0.59
VRK3-201ENST00000316763 GATA2P23769 480 aaPredicted RBP11.39□□□□□ -0.59
VRK3-201ENST00000316763 PDLIM4P50479 330 aa11.39□□□□□ -0.59
VRK3-201ENST00000316763 PRRX1P54821 245 aa11.39□□□□□ -0.59
VRK3-201ENST00000316763 DIAPH2-AS1Q14236 149 aa11.39□□□□□ -0.59
VRK3-201ENST00000316763 SSX2Q16385 188 aa11.39□□□□□ -0.59
VRK3-201ENST00000316763 OR1L4Q8NGR5 311 aa11.39□□□□□ -0.59
VRK3-201ENST00000316763 C8orf46Q8TAG6 207 aa11.39□□□□□ -0.59
VRK3-201ENST00000316763 DNAJC4Q9NNZ3 241 aa11.39□□□□□ -0.59
VRK3-201ENST00000316763 ANKRD17O75179 2603 aaKnown RBP11.39□□□□□ -0.59
VRK3-201ENST00000316763 ENSAO43768 121 aaKnown RBP11.39□□□□□ -0.59
VRK3-201ENST00000316763 IGHV4-39P01824 125 aa11.39□□□□□ -0.59
VRK3-201ENST00000316763 GPR6P46095 362 aaPredicted RBP11.39□□□□□ -0.59
VRK3-201ENST00000316763 GNG4P50150 75 aa11.39□□□□□ -0.59
VRK3-201ENST00000316763 OR2T6Q8NHC8 308 aa11.39□□□□□ -0.59
VRK3-201ENST00000316763 EAF1Q96JC9 268 aaPredicted RBP11.39□□□□□ -0.59
VRK3-201ENST00000316763 SLC25A33Q9BSK2 321 aa11.39□□□□□ -0.59
VRK3-201ENST00000316763 IL36BQ9NZH7 164 aa11.39□□□□□ -0.59
VRK3-201ENST00000316763 CSMD2Q7Z408 3487 aa11.39□□□□□ -0.59
VRK3-201ENST00000316763 ITPR2Q14571 2701 aa11.38□□□□□ -0.59
VRK3-201ENST00000316763 A0A1W2PRE2 83 aa11.38□□□□□ -0.59
VRK3-201ENST00000316763 SLC25A17O43808 307 aa11.38□□□□□ -0.59
VRK3-201ENST00000316763 PAX1P15863 534 aa11.38□□□□□ -0.59
VRK3-201ENST00000316763 HIST1H1BP16401 226 aaKnown RBP11.38□□□□□ -0.59
VRK3-201ENST00000316763 CNN1P51911 297 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms