RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 KMT2EQ8IZD2 1858 aa11.84□□□□□ -0.51
CDT1-201ENST00000301019 K7ESF4 209 aa11.84□□□□□ -0.51
CDT1-201ENST00000301019 OR5AL1P0C617 328 aa11.84□□□□□ -0.51
CDT1-201ENST00000301019 SUMO3P55854 103 aaPredicted RBP11.84□□□□□ -0.51
CDT1-201ENST00000301019 ALKBH6Q3KRA9 238 aa11.84□□□□□ -0.51
CDT1-201ENST00000301019 ADAMTSL5Q6ZMM2 481 aa11.84□□□□□ -0.51
CDT1-201ENST00000301019 GALMQ96C23 342 aa11.84□□□□□ -0.51
CDT1-201ENST00000301019 TMEM140Q9NV12 185 aa11.84□□□□□ -0.51
CDT1-201ENST00000301019 KCNIP1Q9NZI2 227 aa11.84□□□□□ -0.51
CDT1-201ENST00000301019 C9orf118A6NHY6 69 aa11.83□□□□□ -0.52
CDT1-201ENST00000301019 OPRK1P41145 380 aa11.83□□□□□ -0.52
CDT1-201ENST00000301019 CCDC144NLQ6NUI1 221 aa11.83□□□□□ -0.52
CDT1-201ENST00000301019 C1orf159Q96HA4 380 aa11.83□□□□□ -0.52
CDT1-201ENST00000301019 UBE2L3P68036 154 aaKnown RBP11.83□□□□□ -0.52
CDT1-201ENST00000301019 UFSP1Q6NVU6 142 aa11.83□□□□□ -0.52
CDT1-201ENST00000301019 TEPPQ6URK8 271 aa11.83□□□□□ -0.52
CDT1-201ENST00000301019 NFAM1Q8NET5 270 aaPredicted RBP11.83□□□□□ -0.52
CDT1-201ENST00000301019 NABP2Q9BQ15 211 aa11.83□□□□□ -0.52
CDT1-201ENST00000301019 FAM173AQ9BQD7 235 aa11.83□□□□□ -0.52
CDT1-201ENST00000301019 GAGE12HA6NDE8 117 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 ANKRD30BLA7E2S9 258 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 A0A1W2PRD5 423 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 A0A1W2PRF3 423 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 A0A1W2PRM7 423 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 SMIM27A0A1W2PRY6 76 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 FAM90A26D6RGX4 464 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 UTF1Q5T230 341 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 ZNF645Q8N7E2 425 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 OR9G1Q8NH87 305 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 SH2D2AQ9NP31 389 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 OSTCQ9NRP0 149 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 C9JCJ5 164 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 F2RL2O00254 374 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 RFPL3SP0C7P2 107 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 LRRC29Q8WV35 223 aa11.82□□□□□ -0.52
CDT1-201ENST00000301019 CHCHD2Q9Y6H1 151 aaPredicted RBP11.82□□□□□ -0.52
CDT1-201ENST00000301019 TRAV9-1A0A075B6T8 112 aa11.81□□□□□ -0.52
CDT1-201ENST00000301019 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.81□□□□□ -0.52
CDT1-201ENST00000301019 ACP1P24666 158 aa11.81□□□□□ -0.52
CDT1-201ENST00000301019 PROK2Q9HC23 129 aa11.81□□□□□ -0.52
CDT1-201ENST00000301019 TET2Q6N021 2002 aaPredicted RBP11.81□□□□□ -0.52
CDT1-201ENST00000301019 PCNX2A6NKB5 2137 aa11.81□□□□□ -0.52
CDT1-201ENST00000301019 MC5RP33032 325 aa11.81□□□□□ -0.52
CDT1-201ENST00000301019 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.81□□□□□ -0.52
CDT1-201ENST00000301019 ZNF503Q96F45 646 aa11.81□□□□□ -0.52
CDT1-201ENST00000301019 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
CDT1-201ENST00000301019 CACNA1BQ00975 2339 aa11.81□□□□□ -0.52
CDT1-201ENST00000301019 WNK2Q9Y3S1 2297 aa11.81□□□□□ -0.52
CDT1-201ENST00000301019 A0A1W2PR77 199 aa11.81□□□□□ -0.52
CDT1-201ENST00000301019 FABP2P12104 132 aa11.81□□□□□ -0.52
CDT1-201ENST00000301019 VSTM2AQ8TAG5 236 aa11.81□□□□□ -0.52
CDT1-201ENST00000301019 RAB1CQ92928 201 aa11.81□□□□□ -0.52
CDT1-201ENST00000301019 C12orf49Q9H741 205 aa11.81□□□□□ -0.52
CDT1-201ENST00000301019 GNG12Q9UBI6 72 aa11.81□□□□□ -0.52
CDT1-201ENST00000301019 FCER1GP30273 86 aa11.8□□□□□ -0.52
CDT1-201ENST00000301019 C3AR1Q16581 482 aa11.8□□□□□ -0.52
CDT1-201ENST00000301019 OR10D3Q8NH80 312 aa11.8□□□□□ -0.52
CDT1-201ENST00000301019 CPT1CQ8TCG5 803 aa11.8□□□□□ -0.52
CDT1-201ENST00000301019 H3BMG7 143 aa11.8□□□□□ -0.52
CDT1-201ENST00000301019 APELAP0DMC3 54 aa11.8□□□□□ -0.52
CDT1-201ENST00000301019 LINC00322Q6ZN03 302 aaPredicted RBP11.8□□□□□ -0.52
CDT1-201ENST00000301019 Q6ZS49 121 aa11.8□□□□□ -0.52
CDT1-201ENST00000301019 C18orf15Q96N68 181 aa11.8□□□□□ -0.52
CDT1-201ENST00000301019 GEMIN7Q9H840 131 aaKnown RBP11.8□□□□□ -0.52
CDT1-201ENST00000301019 AMMECR1Q9Y4X0 333 aaPredicted RBP11.8□□□□□ -0.52
CDT1-201ENST00000301019 A6NDN8 102 aa11.79□□□□□ -0.52
CDT1-201ENST00000301019 GFRA3O60609 400 aa11.79□□□□□ -0.52
CDT1-201ENST00000301019 LOXL1Q08397 574 aaPredicted RBP11.79□□□□□ -0.52
CDT1-201ENST00000301019 SAMD5Q5TGI4 173 aa11.79□□□□□ -0.52
CDT1-201ENST00000301019 A0A1W2PPM0 123 aa11.79□□□□□ -0.52
CDT1-201ENST00000301019 SCRG1O75711 98 aa11.79□□□□□ -0.52
CDT1-201ENST00000301019 NEGR1Q7Z3B1 354 aa11.79□□□□□ -0.52
CDT1-201ENST00000301019 Q8TCH9 128 aa11.79□□□□□ -0.52
CDT1-201ENST00000301019 LRP4O75096 1905 aa11.79□□□□□ -0.52
CDT1-201ENST00000301019 TRAV8-1A0A0A6YYK1 113 aa11.79□□□□□ -0.52
CDT1-201ENST00000301019 KLF7O75840 302 aaPredicted RBP11.79□□□□□ -0.52
CDT1-201ENST00000301019 APOHP02749 345 aaPredicted RBP11.79□□□□□ -0.52
CDT1-201ENST00000301019 RAB31Q13636 194 aa11.79□□□□□ -0.52
CDT1-201ENST00000301019 FLYWCH2Q96CP2 140 aaKnown RBP11.79□□□□□ -0.52
CDT1-201ENST00000301019 CHODLQ9H9P2 273 aa11.79□□□□□ -0.52
CDT1-201ENST00000301019 HSPB8Q9UJY1 196 aa11.79□□□□□ -0.52
CDT1-201ENST00000301019 IGKV1OR2-108A0A075B7D4 117 aa11.78□□□□□ -0.52
CDT1-201ENST00000301019 IGHV1OR21-1A0A087WYE8 117 aa11.78□□□□□ -0.52
CDT1-201ENST00000301019 IGHV3-21A0A0B4J1V1 117 aa11.78□□□□□ -0.52
CDT1-201ENST00000301019 MRPL33O75394 65 aaKnown RBP11.78□□□□□ -0.52
CDT1-201ENST00000301019 REG1AP05451 166 aa11.78□□□□□ -0.52
CDT1-201ENST00000301019 GNG3P63215 75 aa11.78□□□□□ -0.52
CDT1-201ENST00000301019 FOXF2Q12947 444 aa11.78□□□□□ -0.52
CDT1-201ENST00000301019 FAM169BQ8N8A8 192 aa11.78□□□□□ -0.52
CDT1-201ENST00000301019 PLSCR4Q9NRQ2 329 aa11.78□□□□□ -0.52
CDT1-201ENST00000301019 NHP2Q9NX24 153 aaKnown RBP11.78□□□□□ -0.52
CDT1-201ENST00000301019 COX8AP10176 69 aa11.78□□□□□ -0.52
CDT1-201ENST00000301019 AREGP15514 252 aa11.78□□□□□ -0.52
CDT1-201ENST00000301019 CACNG7P62955 275 aa11.78□□□□□ -0.52
CDT1-201ENST00000301019 Q6P435 159 aa11.78□□□□□ -0.52
CDT1-201ENST00000301019 ZNF497Q6ZNH5 498 aa11.78□□□□□ -0.52
CDT1-201ENST00000301019 PRR7Q8TB68 274 aa11.78□□□□□ -0.52
CDT1-201ENST00000301019 MBD6Q96DN6 1003 aa11.78□□□□□ -0.52
CDT1-201ENST00000301019 MBNL3Q9NUK0 354 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms