RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 HIST1H2BDP58876 126 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 HIST1H2BCP62807 126 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 HIST2H2BEQ16778 126 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.53□□□□□ -1.2
PRDM9-201ENST00000296682 MRPL54Q6P161 138 aaKnown RBP7.53□□□□□ -1.2
PRDM9-201ENST00000296682 MRPL41Q8IXM3 137 aaKnown RBP7.53□□□□□ -1.2
PRDM9-201ENST00000296682 VSTM2AQ8TAG5 236 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 OSR1Q8TAX0 266 aaPredicted RBP7.53□□□□□ -1.2
PRDM9-201ENST00000296682 DDB2Q92466 427 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 HIST1H2BHQ93079 126 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 HIST1H2BNQ99877 126 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 HIST1H2BMQ99879 126 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 CLEC7AQ9BXN2 247 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 TMEM14BQ9NUH8 114 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 TET2Q6N021 2002 aaPredicted RBP7.53□□□□□ -1.2
PRDM9-201ENST00000296682 GRIFINA4D1Z8 144 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 FCN3O75636 299 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 AGAP20933 346 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 USF1P22415 310 aaPredicted RBP7.53□□□□□ -1.2
PRDM9-201ENST00000296682 PRSS8Q16651 343 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 TIGITQ495A1 244 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 CYP2G1PQ6ZSU1 146 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 PFDN5Q99471 154 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 P2RX4Q99571 388 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 KCNIP2Q9NS61 270 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 TNFRSF19Q9NS68 423 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 TECRQ9NZ01 308 aaKnown RBP7.53□□□□□ -1.2
PRDM9-201ENST00000296682 MIOXQ9UGB7 285 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 TRAPPC1Q9Y5R8 145 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 NAV2Q8IVL1 2488 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 IGKV1OR2-108A0A075B7D4 117 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 TIMM23O14925 209 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 MPDU1O75352 247 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 S100A12P80511 92 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 TEX36Q5VZQ5 186 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 C10orf113Q5VZT2 155 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 OR10G8Q8NGN5 311 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 RNASE7Q9H1E1 156 aaKnown RBP7.53□□□□□ -1.2
PRDM9-201ENST00000296682 SLC45A2Q9UMX9 530 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 FOXA2Q9Y261 457 aaPredicted RBP7.53□□□□□ -1.2
PRDM9-201ENST00000296682 A0A1B0GUS0 222 aa7.52□□□□□ -1.21
PRDM9-201ENST00000296682 TMEM11P17152 192 aa7.52□□□□□ -1.21
PRDM9-201ENST00000296682 GNLYP22749 145 aa7.52□□□□□ -1.21
PRDM9-201ENST00000296682 GPR6P46095 362 aaPredicted RBP7.52□□□□□ -1.21
PRDM9-201ENST00000296682 TAS2R45P59539 299 aa7.52□□□□□ -1.21
PRDM9-201ENST00000296682 MORN5Q5VZ52 161 aa7.52□□□□□ -1.21
PRDM9-201ENST00000296682 DMRTC2Q8IXT2 367 aaPredicted RBP7.52□□□□□ -1.21
PRDM9-201ENST00000296682 OR5B3Q8NH48 314 aa7.52□□□□□ -1.21
PRDM9-201ENST00000296682 IGHV3OR16-13A0A075B7E8 117 aa7.52□□□□□ -1.21
PRDM9-201ENST00000296682 IGHV3-74A0A0B4J1X5 117 aa7.52□□□□□ -1.21
PRDM9-201ENST00000296682 PHOX2AO14813 284 aa7.52□□□□□ -1.21
PRDM9-201ENST00000296682 RNASE2P10153 161 aaKnown RBP7.52□□□□□ -1.21
PRDM9-201ENST00000296682 IER3P46695 156 aa7.52□□□□□ -1.21
PRDM9-201ENST00000296682 UCNP55089 124 aa7.52□□□□□ -1.21
PRDM9-201ENST00000296682 GNG5P63218 68 aa7.52□□□□□ -1.21
PRDM9-201ENST00000296682 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.52□□□□□ -1.21
PRDM9-201ENST00000296682 DNAJC4Q9NNZ3 241 aa7.52□□□□□ -1.21
PRDM9-201ENST00000296682 TMEM242Q9NWH2 141 aa7.52□□□□□ -1.21
PRDM9-201ENST00000296682 C5orf52A6NGY3 159 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 B4DEV8 164 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 DLL1O00548 723 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 SIAH2O43255 324 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 LY86O95711 162 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 SLC25A5P05141 298 aaKnown RBP7.51□□□□□ -1.21
PRDM9-201ENST00000296682 CD69Q07108 199 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 TMEM144Q7Z5S9 345 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 SELENOKQ9Y6D0 94 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 LOC105371242A0A075B767 164 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 A0A1W2PN81 502 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 A0A1W2PPI3 338 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 TMEM250H0YL14 139 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 PDE6DO43924 150 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 STAG3L2P0CL84 134 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 STAG3L3P0CL85 134 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 CBLN1P23435 193 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 HTR1DP28221 377 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 CAMPP49913 170 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 ADORA2A-AS1P86434 159 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 LINC00305Q7Z4B0 112 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 OR8I2Q8N0Y5 310 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 Q8N7P7 452 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 FNDC4Q9H6D8 234 aaPredicted RBP7.51□□□□□ -1.21
PRDM9-201ENST00000296682 MRPL36Q9P0J6 103 aaKnown RBP7.51□□□□□ -1.21
PRDM9-201ENST00000296682 CD33P20138 364 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 MC5RP33032 325 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 OR52E5Q8NH55 327 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 PAXXQ9BUH6 204 aa7.51□□□□□ -1.21
PRDM9-201ENST00000296682 RAI1Q7Z5J4 1906 aaPredicted RBP7.51□□□□□ -1.21
PRDM9-201ENST00000296682 TRAV20A0A0B4J274 112 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 C22orf46C9J442 243 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 LIPFP07098 398 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 TMEM155Q4W5P6 130 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 CENPWQ5EE01 88 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 TMUB1Q9BVT8 246 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 GNB4Q9HAV0 340 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 LINC00527Q9UJ94 153 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 FLNCQ14315 2725 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 PGPA6NDG6 321 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 UBE2G1P62253 170 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 HLA-DRB5Q30154 266 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms