RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 COX11Q9Y6N1 276 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 AKAP6Q13023 2319 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.43□□□□□ -1.06
UPF3B-201ENST00000276201 A0A1W2PPR1 153 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 A0A1W2PRE2 83 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 SPINT2O43291 252 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 TSPOP30536 169 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 ERVK-16P61578 105 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 TIGITQ495A1 244 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 CENPWQ5EE01 88 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 FAM162BQ5T6X4 162 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 Q6ZN92 141 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 PQLC2Q6ZP29 291 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 FAM90A1Q86YD7 464 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 C11orf53Q8IXP5 236 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 STPG3Q8N7X2 389 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 ZNF439Q8NDP4 499 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 ZNF738Q8NE65 137 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 TSKUQ8WUA8 353 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 NRGNQ92686 78 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 TXN2Q99757 166 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 TCF19Q9Y242 345 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 FOXA2Q9Y261 457 aaPredicted RBP8.43□□□□□ -1.06
UPF3B-201ENST00000276201 IGHV1-69-2A0A0G2JMI3 117 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 A0A1W2PN81 502 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 OR2J3O76001 311 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 CA2P00918 260 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 IGLV2-8P01709 118 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 LINC00869P0C866 280 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 TFPI2P48307 235 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 PPOXP50336 477 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 POU2AF1Q16633 256 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 ALKBH2Q6NS38 261 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 IGF2BP2-AS1Q96M15 143 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 CXXC4Q9H2H0 198 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 TECRQ9NZ01 308 aaKnown RBP8.42□□□□□ -1.06
UPF3B-201ENST00000276201 ANKRD17O75179 2603 aaKnown RBP8.42□□□□□ -1.06
UPF3B-201ENST00000276201 TRAV9-2A0A087WT02 112 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.42□□□□□ -1.06
UPF3B-201ENST00000276201 CCL25O15444 150 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 GPR12P47775 334 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 RPS16P62249 146 aaKnown RBP8.42□□□□□ -1.06
UPF3B-201ENST00000276201 BATFQ16520 125 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 STUMQ69YW2 141 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.42□□□□□ -1.06
UPF3B-201ENST00000276201 C22orf15Q8WYQ4 148 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 MBD6Q96DN6 1003 aa8.42□□□□□ -1.06
UPF3B-201ENST00000276201 GSX1Q9H4S2 264 aaPredicted RBP8.42□□□□□ -1.06
UPF3B-201ENST00000276201 CSMD1Q96PZ7 3565 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 C15orf61A6NNL5 157 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 C3orf80F5H4A9 247 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 REG1BP48304 166 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 PTTG1IPP53801 180 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 AESQ08117 197 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 TIMM23BQ5SRD1 257 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 MUC15Q8N387 334 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 C1orf162Q8NEQ5 155 aaPredicted RBP8.41□□□□□ -1.06
UPF3B-201ENST00000276201 OR8B3Q8NGG8 313 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 Q8TCH9 128 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 DDB2Q92466 427 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 BORCS7Q96B45 105 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 OR8B2Q96RD0 313 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 CHRDL1Q9BU40 450 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 SEPSECSQ9HD40 501 aaKnown RBP8.41□□□□□ -1.06
UPF3B-201ENST00000276201 PSG11Q9UQ72 335 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 IGHV2OR16-5A0A0B4J2B6 119 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 IGHV2-70DA0A0C4DH43 119 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 H0YJW9 148 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 F2RL2O00254 374 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 PROP1O75360 226 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 APCSP02743 223 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 TAS2R45P59539 299 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 SPINK9Q5DT21 86 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 SPATA31B1PQ5VZV4 182 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 SLC24A4Q8NFF2 622 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 OR13A1Q8NGR1 328 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 MRGPRDQ8TDS7 321 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 PLPPR2Q96GM1 343 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 RCHY1Q96PM5 261 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 TMEM14BQ9NUH8 114 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 SLC25A15Q9Y619 301 aa8.41□□□□□ -1.06
UPF3B-201ENST00000276201 CCDC168Q8NDH2 2452 aa8.4□□□□□ -1.06
UPF3B-201ENST00000276201 CSMD2Q7Z408 3487 aa8.4□□□□□ -1.06
UPF3B-201ENST00000276201 IGLC7A0M8Q6 106 aa8.4□□□□□ -1.06
UPF3B-201ENST00000276201 FRMD6-AS1P0C7T7 363 aa8.4□□□□□ -1.06
UPF3B-201ENST00000276201 HNF1AP20823 631 aa8.4□□□□□ -1.06
UPF3B-201ENST00000276201 NPY1RP25929 384 aa8.4□□□□□ -1.06
UPF3B-201ENST00000276201 SRIP30626 198 aa8.4□□□□□ -1.06
UPF3B-201ENST00000276201 HSPE1P61604 102 aaKnown RBP8.4□□□□□ -1.06
UPF3B-201ENST00000276201 SMIM21Q3B7S5 101 aa8.4□□□□□ -1.06
UPF3B-201ENST00000276201 C18orf32Q8TCD1 76 aa8.4□□□□□ -1.06
UPF3B-201ENST00000276201 FAM103A1Q9BTL3 118 aaKnown RBP8.4□□□□□ -1.06
UPF3B-201ENST00000276201 MRPL32Q9BYC8 188 aaKnown RBP8.4□□□□□ -1.06
UPF3B-201ENST00000276201 ROS1P08922 2347 aa8.4□□□□□ -1.06
UPF3B-201ENST00000276201 TRAV30A0A087WSZ9 112 aa8.4□□□□□ -1.07
UPF3B-201ENST00000276201 FCGR3BO75015 233 aa8.4□□□□□ -1.07
UPF3B-201ENST00000276201 RHOGP84095 191 aa8.4□□□□□ -1.07
UPF3B-201ENST00000276201 ATP5L2Q7Z4Y8 100 aa8.4□□□□□ -1.07
UPF3B-201ENST00000276201 OR4S2Q8NH73 311 aa8.4□□□□□ -1.07
UPF3B-201ENST00000276201 SLC25A40Q8TBP6 338 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms