RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 CCL8P80075 99 aa13.71□□□□□ -0.21
RTN1-201ENST00000267484 STUMQ69YW2 141 aa13.71□□□□□ -0.21
RTN1-201ENST00000267484 Q6ZVH6 145 aa13.71□□□□□ -0.21
RTN1-201ENST00000267484 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.71□□□□□ -0.21
RTN1-201ENST00000267484 SLC35E1Q96K37 410 aa13.71□□□□□ -0.21
RTN1-201ENST00000267484 HARBI1Q96MB7 349 aa13.71□□□□□ -0.21
RTN1-201ENST00000267484 RPH3ALQ9UNE2 315 aa13.71□□□□□ -0.21
RTN1-201ENST00000267484 IGHV1-46P01743 117 aa13.71□□□□□ -0.22
RTN1-201ENST00000267484 MT-ND6P03923 174 aa13.71□□□□□ -0.22
RTN1-201ENST00000267484 REG1AP05451 166 aa13.71□□□□□ -0.22
RTN1-201ENST00000267484 CTRLP40313 264 aa13.71□□□□□ -0.22
RTN1-201ENST00000267484 DEFB109BQ30KR1 87 aa13.71□□□□□ -0.22
RTN1-201ENST00000267484 MRPL36Q9P0J6 103 aaKnown RBP13.71□□□□□ -0.22
RTN1-201ENST00000267484 TTC28Q96AY4 2481 aa13.71□□□□□ -0.22
RTN1-201ENST00000267484 TRAV17A0A0B4J275 112 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 CD24P25063 80 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 CAMPP49913 170 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 POU2AF1Q16633 256 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 C2orf83Q53S99 150 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 OR10J3Q5JRS4 329 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 OR4B1Q8NGF8 309 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 ADTRPQ96IZ2 230 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 DYSFO75923 2080 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 APELAP0DMC3 54 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 GLRXP35754 106 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 RUSC1-AS1Q66K80 236 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 SLC25A48Q6ZT89 311 aaKnown RBP13.7□□□□□ -0.22
RTN1-201ENST00000267484 TXN2Q99757 166 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 COMMD5Q9GZQ3 224 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 FNDC4Q9H6D8 234 aaPredicted RBP13.7□□□□□ -0.22
RTN1-201ENST00000267484 ZNF331Q9NQX6 463 aaPredicted RBP13.7□□□□□ -0.22
RTN1-201ENST00000267484 ZNF257Q9Y2Q1 563 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 AMMECR1Q9Y4X0 333 aaPredicted RBP13.7□□□□□ -0.22
RTN1-201ENST00000267484 C18orf32Q8TCD1 76 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 NPIPB3Q92617 1050 aa13.7□□□□□ -0.22
RTN1-201ENST00000267484 RPUSD1Q9UJJ7 312 aaKnown RBP13.7□□□□□ -0.22
RTN1-201ENST00000267484 A0A1W2PRE2 83 aa13.69□□□□□ -0.22
RTN1-201ENST00000267484 DPRXA6NFQ7 191 aa13.69□□□□□ -0.22
RTN1-201ENST00000267484 HYPMO75409 117 aa13.69□□□□□ -0.22
RTN1-201ENST00000267484 RPL8P62917 257 aaKnown RBP13.69□□□□□ -0.22
RTN1-201ENST00000267484 TNXAQ16473 311 aa13.69□□□□□ -0.22
RTN1-201ENST00000267484 DMRTA1Q5VZB9 504 aa13.69□□□□□ -0.22
RTN1-201ENST00000267484 Q6ZN92 141 aa13.69□□□□□ -0.22
RTN1-201ENST00000267484 STPG4Q8N801 248 aa13.69□□□□□ -0.22
RTN1-201ENST00000267484 POLEQ07864 2286 aa13.69□□□□□ -0.22
RTN1-201ENST00000267484 TACC2O95359 2948 aa13.69□□□□□ -0.22
RTN1-201ENST00000267484 H3BTX0 84 aa13.69□□□□□ -0.22
RTN1-201ENST00000267484 ITGB1BP1O14713 200 aa13.69□□□□□ -0.22
RTN1-201ENST00000267484 HLA-DQA1P01909 254 aa13.69□□□□□ -0.22
RTN1-201ENST00000267484 PRB4P10163 310 aaPredicted RBP13.69□□□□□ -0.22
RTN1-201ENST00000267484 PATE2Q6UY27 113 aa13.69□□□□□ -0.22
RTN1-201ENST00000267484 C19orf35Q6ZS72 473 aa13.69□□□□□ -0.22
RTN1-201ENST00000267484 DNAJC4Q9NNZ3 241 aa13.69□□□□□ -0.22
RTN1-201ENST00000267484 PSMB11A5LHX3 300 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 IZUMO1RA6ND01 250 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 FAM27E3Q08E93 113 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 SPACA3Q8IXA5 215 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 BLNKQ8WV28 456 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 TP73-AS1Q9UF72 201 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 ATMQ13315 3056 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 COX7A2P2O60397 106 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 WT1-ASQ06250 92 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 CLEC7AQ9BXN2 247 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 IGHV3-21A0A0B4J1V1 117 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 C11orf42Q8N5U0 333 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 NUP35Q8NFH5 326 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 NUDT10Q8NFP7 164 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 FAM222BQ8WU58 562 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 NUDT11Q96G61 164 aa13.68□□□□□ -0.22
RTN1-201ENST00000267484 SPAARA0A1B0GVQ0 90 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 FNDC10F2Z333 226 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 IGLC2P0DOY2 106 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 IGLC3P0DOY3 106 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 RPL19P84098 196 aaKnown RBP13.67□□□□□ -0.22
RTN1-201ENST00000267484 ZNF841Q6ZN19 808 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 ZNF788Q6ZQV5 615 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 PAXXQ9BUH6 204 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 ARL2-SNX15V9GYD0 113 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 M0QZ24 198 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 PRRX1P54821 245 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 VWC2LB2RUY7 222 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 MOSP00540 346 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 PRB3Q04118 309 aaPredicted RBP13.67□□□□□ -0.22
RTN1-201ENST00000267484 PMCHL1Q16048 86 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 KIR3DL3Q8N743 410 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 OR1L8Q8NGR8 309 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 BORCS7Q96B45 105 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 TPSG1Q9NRR2 321 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 NDUFA4L2Q9NRX3 87 aa13.67□□□□□ -0.22
RTN1-201ENST00000267484 SH2D7A6NKC9 451 aaPredicted RBP13.66□□□□□ -0.22
RTN1-201ENST00000267484 Q56UQ5 140 aa13.66□□□□□ -0.22
RTN1-201ENST00000267484 RNASEKQ6P5S7 137 aaKnown RBP13.66□□□□□ -0.22
RTN1-201ENST00000267484 ZNF329Q86UD4 541 aa13.66□□□□□ -0.22
RTN1-201ENST00000267484 OR5B3Q8NH48 314 aa13.66□□□□□ -0.22
RTN1-201ENST00000267484 BET1LQ9NYM9 111 aa13.66□□□□□ -0.22
RTN1-201ENST00000267484 IGLV3-9A0A075B6K5 115 aa13.66□□□□□ -0.22
RTN1-201ENST00000267484 CGB1A6NKQ9 187 aa13.66□□□□□ -0.22
RTN1-201ENST00000267484 FCN3O75636 299 aa13.66□□□□□ -0.22
RTN1-201ENST00000267484 BTF3P20290 206 aaKnown RBP13.66□□□□□ -0.22
RTN1-201ENST00000267484 TIMM23BQ5SRD1 257 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms