RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 CGB7P0DN87 165 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 TDGF1P3P51864 188 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 PMCHL1Q16048 86 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 Q6ZVH6 145 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 BEND2Q8NDZ0 799 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 C1orf162Q8NEQ5 155 aaPredicted RBP7.42□□□□□ -1.22
MSH4-201ENST00000263187 NEUROG1Q92886 237 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 TP73-AS1Q9UF72 201 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 GLRXP35754 106 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 SELENOVP59797 346 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 MZT1Q08AG7 82 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 SLAQ13239 276 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 KIR3DL3Q8N743 410 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 OR10X1Q8NGY0 326 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 NRN1Q9NPD7 142 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 MUC6Q6W4X9 2439 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 RAI1Q7Z5J4 1906 aaPredicted RBP7.41□□□□□ -1.22
MSH4-201ENST00000263187 TRGV8A0A0C4DH27 118 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 FOSL1P15407 271 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 MFAP2P55001 183 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 PRCDQ00LT1 54 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 LYPD2Q6UXB3 125 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 TMEM68Q96MH6 324 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 NEU1Q99519 415 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 PRNDQ9UKY0 176 aa7.41□□□□□ -1.22
MSH4-201ENST00000263187 SLC25A17O43808 307 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 COX7A2P2O60397 106 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 NPSP0C0P6 89 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 RNASE2P10153 161 aaKnown RBP7.4□□□□□ -1.22
MSH4-201ENST00000263187 AREGP15514 252 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 USF1P22415 310 aaPredicted RBP7.4□□□□□ -1.22
MSH4-201ENST00000263187 KIR2DS2P43631 304 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 MMDQ15546 238 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 AARDQ4LEZ3 155 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 ZNF439Q8NDP4 499 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 FNDC4Q9H6D8 234 aaPredicted RBP7.4□□□□□ -1.22
MSH4-201ENST00000263187 SAP30LQ9HAJ7 183 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 TUBG2Q9NRH3 451 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 SLC25A10Q9UBX3 287 aaPredicted RBP7.4□□□□□ -1.22
MSH4-201ENST00000263187 A0A1W2PS18 150 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 ISLRO14498 428 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 WT1-ASQ06250 92 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 TMEM136Q6ZRR5 245 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 PIP4P1Q86T03 277 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 ZADH2Q8N4Q0 377 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 OR1B1Q8NGR6 318 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 SLC25A33Q9BSK2 321 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 ASCL3Q9NQ33 180 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 CDC42EP3Q9UKI2 254 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 ARHGAP32A7KAX9 2087 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 DSCAML1Q8TD84 2053 aa7.4□□□□□ -1.22
MSH4-201ENST00000263187 KIR2DL5BA0A0G2JN68 375 aa7.4□□□□□ -1.23
MSH4-201ENST00000263187 KIR2DL5BA0A0G2JPC4 375 aa7.4□□□□□ -1.23
MSH4-201ENST00000263187 SH2D7A6NKC9 451 aaPredicted RBP7.4□□□□□ -1.23
MSH4-201ENST00000263187 FAM90A9PA6NNJ1 464 aa7.4□□□□□ -1.23
MSH4-201ENST00000263187 BMPR1BO00238 502 aa7.4□□□□□ -1.23
MSH4-201ENST00000263187 TM4SF5O14894 197 aa7.4□□□□□ -1.23
MSH4-201ENST00000263187 IGLV2-8P01709 118 aa7.4□□□□□ -1.23
MSH4-201ENST00000263187 GPX1P07203 203 aa7.4□□□□□ -1.23
MSH4-201ENST00000263187 C8orf88P0DMB2 117 aa7.4□□□□□ -1.23
MSH4-201ENST00000263187 RPL8P62917 257 aaKnown RBP7.4□□□□□ -1.23
MSH4-201ENST00000263187 Q71RC1 249 aaPredicted RBP7.4□□□□□ -1.23
MSH4-201ENST00000263187 KIR2DL5AQ8N109 375 aa7.4□□□□□ -1.23
MSH4-201ENST00000263187 SLC25A2Q9BXI2 301 aa7.4□□□□□ -1.23
MSH4-201ENST00000263187 TMEM167BQ9NRX6 74 aa7.4□□□□□ -1.23
MSH4-201ENST00000263187 RPUSD1Q9UJJ7 312 aaKnown RBP7.4□□□□□ -1.23
MSH4-201ENST00000263187 AMMECR1Q9Y4X0 333 aaPredicted RBP7.4□□□□□ -1.23
MSH4-201ENST00000263187 A0A1W2PRD5 423 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 A0A1W2PRF3 423 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 A0A1W2PRM7 423 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 H0Y8G0 127 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 FCN3O75636 299 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 RAB4AP20338 218 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 BRS3P32247 399 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 FOXA3P55318 350 aaPredicted RBP7.39□□□□□ -1.23
MSH4-201ENST00000263187 SELENOTP62341 195 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 TMEM183BQ1AE95 376 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 TIMM23BQ5SRD1 257 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 ERASQ7Z444 233 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 RBMXL3Q8N7X1 1067 aaKnown RBP7.39□□□□□ -1.23
MSH4-201ENST00000263187 OR2D3Q8NGH3 330 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 SLC35E1Q96K37 410 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 MCRIP2Q9BUT9 160 aaKnown RBP7.39□□□□□ -1.23
MSH4-201ENST00000263187 ZNF586Q9NXT0 402 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 LYNX1G3V0Z9 82 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 APCSP02743 223 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 LYNX1P0DP58 116 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 CD40P25942 277 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 CNTFRP26992 372 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 COMPP49747 757 aaPredicted RBP7.39□□□□□ -1.23
MSH4-201ENST00000263187 ZNF137PP52743 207 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 CX3CL1P78423 397 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 CD69Q07108 199 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 TMEM249Q2WGJ8 235 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 SPATA45Q537H7 98 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 TCF24Q7RTU0 167 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 ST6GALNAC6Q969X2 333 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 C11orf52Q96A22 123 aa7.39□□□□□ -1.23
MSH4-201ENST00000263187 FLYWCH2Q96CP2 140 aaKnown RBP7.39□□□□□ -1.23
MSH4-201ENST00000263187 DNAJC4Q9NNZ3 241 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms