RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.12□□□□□ -0.31
PRPF40B-201ENST00000261897 LINC00596Q86U02 117 aa13.12□□□□□ -0.31
PRPF40B-201ENST00000261897 Q8N976 141 aa13.12□□□□□ -0.31
PRPF40B-201ENST00000261897 ZBTB34Q8NCN2 500 aa13.12□□□□□ -0.31
PRPF40B-201ENST00000261897 C8orf88P0DMB2 117 aa13.12□□□□□ -0.31
PRPF40B-201ENST00000261897 OR4S2Q8NH73 311 aa13.12□□□□□ -0.31
PRPF40B-201ENST00000261897 OSTCQ9NRP0 149 aa13.12□□□□□ -0.31
PRPF40B-201ENST00000261897 MRPS17Q9Y2R5 130 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-201ENST00000261897 ZNF718Q3SXZ3 478 aa13.12□□□□□ -0.31
PRPF40B-201ENST00000261897 PEAR1Q5VY43 1037 aaPredicted RBP13.12□□□□□ -0.31
PRPF40B-201ENST00000261897 OR1L4Q8NGR5 311 aa13.12□□□□□ -0.31
PRPF40B-201ENST00000261897 C18orf15Q96N68 181 aa13.12□□□□□ -0.31
PRPF40B-201ENST00000261897 KMT2EQ8IZD2 1858 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 HLA-DRB1P01911 266 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 BVES-AS1Q5T3Y7 98 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 HCP5Q6MZN7 132 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 COQ2Q96H96 371 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 CSTL1Q9H114 145 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 TRAV8-1A0A0A6YYK1 113 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 TAX1BP3O14907 124 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 DUTP33316 252 aaKnown RBP13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 PRNTQ86SH4 94 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 PDPNQ86YL7 162 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 NPIPB3Q92617 1050 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 ATG2AQ2TAZ0 1938 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 hADV38S2A0JD32 116 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 SYS1-DBNDD2H3BUS1 97 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 K7EMI3 77 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 SP1P08047 785 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 COX19Q49B96 90 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 LRRC10Q5BKY1 277 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 DHRS13Q6UX07 377 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 PKIBQ9C010 78 aa13.11□□□□□ -0.31
PRPF40B-201ENST00000261897 ACACAQ13085 2346 aa13.1□□□□□ -0.31
PRPF40B-201ENST00000261897 PRDX2P32119 198 aa13.1□□□□□ -0.31
PRPF40B-201ENST00000261897 PNKDQ8N490 385 aa13.1□□□□□ -0.31
PRPF40B-201ENST00000261897 PPP1R35Q8TAP8 253 aa13.1□□□□□ -0.31
PRPF40B-201ENST00000261897 IMMP1LQ96LU5 166 aa13.1□□□□□ -0.31
PRPF40B-201ENST00000261897 CHRNA10Q9GZZ6 450 aa13.1□□□□□ -0.31
PRPF40B-201ENST00000261897 BRWD1-AS2P59051 145 aa13.1□□□□□ -0.31
PRPF40B-201ENST00000261897 HSPE1P61604 102 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-201ENST00000261897 PRB3Q04118 309 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-201ENST00000261897 C10orf113Q5VZT2 155 aa13.1□□□□□ -0.31
PRPF40B-201ENST00000261897 SFTA2Q6UW10 78 aa13.1□□□□□ -0.31
PRPF40B-201ENST00000261897 PERPQ96FX8 193 aa13.1□□□□□ -0.31
PRPF40B-201ENST00000261897 DUSP23Q9BVJ7 150 aa13.1□□□□□ -0.31
PRPF40B-201ENST00000261897 MUC22E2RYF6 1773 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-201ENST00000261897 MORN5Q5VZ52 161 aa13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 C17orf82Q86X59 251 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 KLF14Q8TD94 323 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 CXCL12P48061 93 aa13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 B3GALT5-AS1P59052 145 aa13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 RNPS1Q15287 305 aaKnown RBP13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 SPATA12Q7Z6I5 190 aa13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 SPEM1Q8N4L4 309 aa13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 SPCS1Q9Y6A9 102 aa13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 IGHV3-72A0A0B4J1Y9 119 aa13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 APOHP02749 345 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 HBBP68871 147 aa13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 C10orf55Q5SWW7 151 aa13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 Q6ZR03 302 aa13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 RAB1CQ92928 201 aa13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 TMUB1Q9BVT8 246 aa13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 HES4Q9HCC6 221 aa13.09□□□□□ -0.31
PRPF40B-201ENST00000261897 TRAV9-1A0A075B6T8 112 aa13.08□□□□□ -0.31
PRPF40B-201ENST00000261897 SSPNQ14714 243 aa13.08□□□□□ -0.31
PRPF40B-201ENST00000261897 SAMD13Q5VXD3 122 aa13.08□□□□□ -0.31
PRPF40B-201ENST00000261897 H1FXQ92522 213 aaKnown RBP13.08□□□□□ -0.31
PRPF40B-201ENST00000261897 C9JCJ5 164 aa13.08□□□□□ -0.32
PRPF40B-201ENST00000261897 KLK10O43240 276 aa13.08□□□□□ -0.32
PRPF40B-201ENST00000261897 MRPL14Q6P1L8 145 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-201ENST00000261897 CT55Q8WUE5 264 aa13.08□□□□□ -0.32
PRPF40B-201ENST00000261897 KLF13Q9Y2Y9 288 aaPredicted RBP13.08□□□□□ -0.32
PRPF40B-201ENST00000261897 PEX7O00628 323 aa13.08□□□□□ -0.32
PRPF40B-201ENST00000261897 KLF7O75840 302 aaPredicted RBP13.08□□□□□ -0.32
PRPF40B-201ENST00000261897 SLC35E4Q6ICL7 350 aa13.08□□□□□ -0.32
PRPF40B-201ENST00000261897 FER1L6-AS1Q8NA97 138 aa13.08□□□□□ -0.32
PRPF40B-201ENST00000261897 K7EP13 123 aa13.07□□□□□ -0.32
PRPF40B-201ENST00000261897 AREGP15514 252 aa13.07□□□□□ -0.32
PRPF40B-201ENST00000261897 COLCA1Q6ZS62 124 aa13.07□□□□□ -0.32
PRPF40B-201ENST00000261897 MOGAT3Q86VF5 341 aa13.07□□□□□ -0.32
PRPF40B-201ENST00000261897 OR10AG1Q8NH19 301 aa13.07□□□□□ -0.32
PRPF40B-201ENST00000261897 CDX2Q99626 313 aaPredicted RBP13.07□□□□□ -0.32
PRPF40B-201ENST00000261897 TEX50A0A1B0GTY4 177 aa13.07□□□□□ -0.32
PRPF40B-201ENST00000261897 ERHP84090 104 aaKnown RBP13.07□□□□□ -0.32
PRPF40B-201ENST00000261897 OR2K2Q8NGT1 345 aa13.07□□□□□ -0.32
PRPF40B-201ENST00000261897 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.07□□□□□ -0.32
PRPF40B-201ENST00000261897 TOMM40O96008 361 aa13.07□□□□□ -0.32
PRPF40B-201ENST00000261897 SRSF7Q16629 238 aaKnown RBP eCLIP13.07□□□□□ -0.32
PRPF40B-201ENST00000261897 PIEZO2Q9H5I5 2752 aa13.06□□□□□ -0.32
PRPF40B-201ENST00000261897 A6NDN8 102 aa13.06□□□□□ -0.32
PRPF40B-201ENST00000261897 DNPH1O43598 174 aa13.06□□□□□ -0.32
PRPF40B-201ENST00000261897 GUSBP1Q15486 140 aa13.06□□□□□ -0.32
PRPF40B-201ENST00000261897 TMEM97Q5BJF2 176 aa13.06□□□□□ -0.32
PRPF40B-201ENST00000261897 AP5S1Q9NUS5 200 aa13.06□□□□□ -0.32
PRPF40B-201ENST00000261897 A8MWL6 223 aa13.06□□□□□ -0.32
PRPF40B-201ENST00000261897 UTF1Q5T230 341 aa13.06□□□□□ -0.32
PRPF40B-201ENST00000261897 SRSF12Q8WXF0 261 aaKnown RBP13.06□□□□□ -0.32
PRPF40B-201ENST00000261897 GDF5OSQ5U4N7 250 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms