RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 SLC25A2Q9BXI2 301 aa20.65■□□□□ 0.9
RAB40C-201ENST00000248139 ENSAO43768 121 aaKnown RBP20.65■□□□□ 0.9
RAB40C-201ENST00000248139 C8orf88P0DMB2 117 aa20.65■□□□□ 0.9
RAB40C-201ENST00000248139 TDRG1Q3Y452 100 aa20.65■□□□□ 0.9
RAB40C-201ENST00000248139 DMRTC2Q8IXT2 367 aaPredicted RBP20.65■□□□□ 0.9
RAB40C-201ENST00000248139 FAM167A-AS1Q96KT0 104 aa20.65■□□□□ 0.9
RAB40C-201ENST00000248139 SPTA1P02549 2419 aa20.65■□□□□ 0.9
RAB40C-201ENST00000248139 TRAV34A0A0B4J273 112 aa20.64■□□□□ 0.9
RAB40C-201ENST00000248139 FNDC10F2Z333 226 aa20.64■□□□□ 0.9
RAB40C-201ENST00000248139 UBE2L3P68036 154 aaKnown RBP20.64■□□□□ 0.9
RAB40C-201ENST00000248139 IQCJQ1A5X6 159 aa20.64■□□□□ 0.9
RAB40C-201ENST00000248139 SGK494Q96LW2 274 aa20.64■□□□□ 0.9
RAB40C-201ENST00000248139 SSBP3Q9BWW4 388 aaPredicted RBP20.64■□□□□ 0.9
RAB40C-201ENST00000248139 POLR3KQ9Y2Y1 108 aaPredicted RBP20.64■□□□□ 0.9
RAB40C-201ENST00000248139 MALRD1Q5VYJ5 2156 aa20.64■□□□□ 0.89
RAB40C-201ENST00000248139 ZNF705FA8MVS1 300 aaPredicted RBP20.64■□□□□ 0.89
RAB40C-201ENST00000248139 ZNF705DP0CH99 300 aaPredicted RBP20.64■□□□□ 0.89
RAB40C-201ENST00000248139 ZNF705BP0CI00 300 aaPredicted RBP20.64■□□□□ 0.89
RAB40C-201ENST00000248139 PRR31Q5SQ13 230 aa20.64■□□□□ 0.89
RAB40C-201ENST00000248139 HCP5Q6MZN7 132 aa20.64■□□□□ 0.89
RAB40C-201ENST00000248139 MRPL54Q6P161 138 aaKnown RBP20.64■□□□□ 0.89
RAB40C-201ENST00000248139 TMEM106BQ9NUM4 274 aa20.64■□□□□ 0.89
RAB40C-201ENST00000248139 IGLV2-8P01709 118 aa20.63■□□□□ 0.89
RAB40C-201ENST00000248139 RAB4BP61018 213 aa20.63■□□□□ 0.89
RAB40C-201ENST00000248139 Q6ZWC4 215 aa20.63■□□□□ 0.89
RAB40C-201ENST00000248139 FAM168AQ92567 244 aa20.63■□□□□ 0.89
RAB40C-201ENST00000248139 DLL1O00548 723 aa20.63■□□□□ 0.89
RAB40C-201ENST00000248139 TCF15Q12870 199 aa20.63■□□□□ 0.89
RAB40C-201ENST00000248139 TIGITQ495A1 244 aa20.63■□□□□ 0.89
RAB40C-201ENST00000248139 BAGE3Q86Y29 109 aa20.63■□□□□ 0.89
RAB40C-201ENST00000248139 BAGE2Q86Y30 109 aa20.63■□□□□ 0.89
RAB40C-201ENST00000248139 LYNX1G3V0Z9 82 aa20.62■□□□□ 0.89
RAB40C-201ENST00000248139 NDUFB3O43676 98 aa20.62■□□□□ 0.89
RAB40C-201ENST00000248139 LYNX1P0DP58 116 aa20.62■□□□□ 0.89
RAB40C-201ENST00000248139 PATE2Q6UY27 113 aa20.62■□□□□ 0.89
RAB40C-201ENST00000248139 DNAJC4Q9NNZ3 241 aa20.62■□□□□ 0.89
RAB40C-201ENST00000248139 ZNF355PQ9NSJ1 428 aa20.62■□□□□ 0.89
RAB40C-201ENST00000248139 PSMB11A5LHX3 300 aa20.62■□□□□ 0.89
RAB40C-201ENST00000248139 TAS2R45P59539 299 aa20.62■□□□□ 0.89
RAB40C-201ENST00000248139 TMEM177Q53S58 311 aa20.62■□□□□ 0.89
RAB40C-201ENST00000248139 GFRALQ6UXV0 394 aa20.62■□□□□ 0.89
RAB40C-201ENST00000248139 OR4C13Q8NGP0 309 aa20.62■□□□□ 0.89
RAB40C-201ENST00000248139 CBLN4Q9NTU7 201 aa20.62■□□□□ 0.89
RAB40C-201ENST00000248139 NAGKQ9UJ70 344 aa20.62■□□□□ 0.89
RAB40C-201ENST00000248139 MEF2CQ06413 473 aaPredicted RBP20.61■□□□□ 0.89
RAB40C-201ENST00000248139 NAT8BQ9UHF3 227 aa20.61■□□□□ 0.89
RAB40C-201ENST00000248139 MOSP00540 346 aa20.61■□□□□ 0.89
RAB40C-201ENST00000248139 IGLV2-23P01705 113 aa20.61■□□□□ 0.89
RAB40C-201ENST00000248139 CNTFRP26992 372 aa20.61■□□□□ 0.89
RAB40C-201ENST00000248139 CDKN1AP38936 164 aa20.61■□□□□ 0.89
RAB40C-201ENST00000248139 TDGF1P3P51864 188 aa20.61■□□□□ 0.89
RAB40C-201ENST00000248139 TBX15Q96SF7 602 aa20.61■□□□□ 0.89
RAB40C-201ENST00000248139 EREGO14944 169 aa20.61■□□□□ 0.89
RAB40C-201ENST00000248139 Q8NA96 180 aa20.61■□□□□ 0.89
RAB40C-201ENST00000248139 HSPB9Q9BQS6 159 aa20.61■□□□□ 0.89
RAB40C-201ENST00000248139 FAM103A1Q9BTL3 118 aaKnown RBP20.61■□□□□ 0.89
RAB40C-201ENST00000248139 NDUFAF3Q9BU61 184 aa20.61■□□□□ 0.89
RAB40C-201ENST00000248139 COX7A2P2O60397 106 aa20.6■□□□□ 0.89
RAB40C-201ENST00000248139 LOXP28300 417 aaPredicted RBP20.6■□□□□ 0.89
RAB40C-201ENST00000248139 SELENOTP62341 195 aa20.6■□□□□ 0.89
RAB40C-201ENST00000248139 NOL4LQ96MY1 436 aaPredicted RBP20.6■□□□□ 0.89
RAB40C-201ENST00000248139 RNF114Q9Y508 228 aa20.6■□□□□ 0.89
RAB40C-201ENST00000248139 USF1P22415 310 aaPredicted RBP20.6■□□□□ 0.89
RAB40C-201ENST00000248139 LRRC10Q5BKY1 277 aa20.6■□□□□ 0.89
RAB40C-201ENST00000248139 ASH1LQ9NR48 2969 aaKnown RBP20.59■□□□□ 0.89
RAB40C-201ENST00000248139 IGKV1D-37A0A075B6S9 117 aa20.59■□□□□ 0.89
RAB40C-201ENST00000248139 A0A1W2PPI3 338 aa20.59■□□□□ 0.89
RAB40C-201ENST00000248139 IBA57Q5T440 356 aaKnown RBP20.59■□□□□ 0.89
RAB40C-201ENST00000248139 TGIF2LXQ8IUE1 241 aa20.59■□□□□ 0.89
RAB40C-201ENST00000248139 RNASE6Q93091 150 aaKnown RBP20.59■□□□□ 0.89
RAB40C-201ENST00000248139 DYNLRB1Q9NP97 96 aa20.59■□□□□ 0.89
RAB40C-201ENST00000248139 LY96Q9Y6Y9 160 aa20.59■□□□□ 0.89
RAB40C-201ENST00000248139 GNG5P63218 68 aa20.59■□□□□ 0.89
RAB40C-201ENST00000248139 TMEM167AQ8TBQ9 72 aa20.59■□□□□ 0.89
RAB40C-201ENST00000248139 ORM2P19652 201 aa20.58■□□□□ 0.89
RAB40C-201ENST00000248139 ST6GALNAC6Q969X2 333 aa20.58■□□□□ 0.89
RAB40C-201ENST00000248139 IGF2BP2-AS1Q96M15 143 aa20.58■□□□□ 0.89
RAB40C-201ENST00000248139 GNB4Q9HAV0 340 aa20.58■□□□□ 0.89
RAB40C-201ENST00000248139 H3BTX0 84 aa20.58■□□□□ 0.88
RAB40C-201ENST00000248139 TOMM20LQ6UXN7 152 aa20.58■□□□□ 0.88
RAB40C-201ENST00000248139 GSX1Q9H4S2 264 aaPredicted RBP20.58■□□□□ 0.88
RAB40C-201ENST00000248139 E7EQL1 145 aa20.57■□□□□ 0.88
RAB40C-201ENST00000248139 C10orf113Q5VZT2 155 aa20.57■□□□□ 0.88
RAB40C-201ENST00000248139 PRR27Q6MZM9 219 aa20.57■□□□□ 0.88
RAB40C-201ENST00000248139 CHODLQ9H9P2 273 aa20.57■□□□□ 0.88
RAB40C-201ENST00000248139 PPOXP50336 477 aa20.57■□□□□ 0.88
RAB40C-201ENST00000248139 TMEM30BQ3MIR4 351 aa20.57■□□□□ 0.88
RAB40C-201ENST00000248139 BLNKQ8WV28 456 aa20.57■□□□□ 0.88
RAB40C-201ENST00000248139 CACNG8Q8WXS5 425 aa20.57■□□□□ 0.88
RAB40C-201ENST00000248139 ATG101Q9BSB4 218 aa20.57■□□□□ 0.88
RAB40C-201ENST00000248139 PAXXQ9BUH6 204 aa20.57■□□□□ 0.88
RAB40C-201ENST00000248139 WASHC3Q9Y3C0 194 aa20.57■□□□□ 0.88
RAB40C-201ENST00000248139 A0A1W2PRE2 83 aa20.56■□□□□ 0.88
RAB40C-201ENST00000248139 CX3CL1P78423 397 aa20.56■□□□□ 0.88
RAB40C-201ENST00000248139 RPH3ALQ9UNE2 315 aa20.56■□□□□ 0.88
RAB40C-201ENST00000248139 RANP62826 216 aaKnown RBP20.56■□□□□ 0.88
RAB40C-201ENST00000248139 MRGPRG-AS1Q2M3A8 158 aa20.56■□□□□ 0.88
RAB40C-201ENST00000248139 RCHY1Q96PM5 261 aa20.56■□□□□ 0.88
RAB40C-201ENST00000248139 SAMD10Q9BYL1 202 aa20.56■□□□□ 0.88
RAB40C-201ENST00000248139 AMMECR1Q9Y4X0 333 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms