RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 TMEM106BQ9NUM4 274 aa11.65□□□□□ -0.54
HIF3A-202ENST00000244303 PPIAL4AQ9Y536 164 aa11.65□□□□□ -0.54
HIF3A-202ENST00000244303 ANKRD11Q6UB99 2663 aaPredicted RBP11.65□□□□□ -0.54
HIF3A-202ENST00000244303 RPLP1P05386 114 aaKnown RBP11.65□□□□□ -0.55
HIF3A-202ENST00000244303 C8orf88P0DMB2 117 aa11.65□□□□□ -0.55
HIF3A-202ENST00000244303 IER3P46695 156 aa11.65□□□□□ -0.55
HIF3A-202ENST00000244303 SSBP2P81877 361 aaPredicted RBP11.65□□□□□ -0.55
HIF3A-202ENST00000244303 LYPD2Q6UXB3 125 aa11.65□□□□□ -0.55
HIF3A-202ENST00000244303 OR10X1Q8NGY0 326 aa11.65□□□□□ -0.55
HIF3A-202ENST00000244303 CCL17Q92583 94 aa11.65□□□□□ -0.55
HIF3A-202ENST00000244303 TRAV5A0A0B4J249 113 aa11.64□□□□□ -0.55
HIF3A-202ENST00000244303 TMEM178BH3BS89 294 aa11.64□□□□□ -0.55
HIF3A-202ENST00000244303 FCN1O00602 326 aa11.64□□□□□ -0.55
HIF3A-202ENST00000244303 USF1P22415 310 aaPredicted RBP11.64□□□□□ -0.55
HIF3A-202ENST00000244303 PAFAH1B2P68402 229 aa11.64□□□□□ -0.55
HIF3A-202ENST00000244303 CACNG8Q8WXS5 425 aa11.64□□□□□ -0.55
HIF3A-202ENST00000244303 PSMB11A5LHX3 300 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 CGB1A6NKQ9 187 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 SNURFLB1AK76 121 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 PLXNB1O43157 2135 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 CRISP2P16562 243 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 LINC00310P59036 64 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 WT1-ASQ06250 92 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 FXYD3Q14802 87 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 C10orf55Q5SWW7 151 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 BAGE3Q86Y29 109 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 BAGE2Q86Y30 109 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 OR4C13Q8NGP0 309 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 TMEM167AQ8TBQ9 72 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 SLC25A2Q9BXI2 301 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 COL25A1Q9BXS0 654 aaPredicted RBP11.63□□□□□ -0.55
HIF3A-202ENST00000244303 DCHS1Q96JQ0 3298 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 PKDREJQ9NTG1 2253 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 A0A1W2PRE2 83 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 TIGITQ495A1 244 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 FAM167A-AS1Q96KT0 104 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 HSPB9Q9BQS6 159 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 MRPL32Q9BYC8 188 aaKnown RBP11.63□□□□□ -0.55
HIF3A-202ENST00000244303 SAMD10Q9BYL1 202 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 PAM16Q9Y3D7 125 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 DMXL2Q8TDJ6 3036 aa11.63□□□□□ -0.55
HIF3A-202ENST00000244303 A0A1W2PN81 502 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 NDUFB3O43676 98 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 SPINK4O60575 86 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 IGLV2-8P01709 118 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 IGHV3-48P01763 117 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 BATFQ16520 125 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 TMEM183BQ1AE95 376 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 Q6ZWC4 215 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 PDPNQ86YL7 162 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 ST6GALNAC3Q8NDV1 305 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 FNDC4Q9H6D8 234 aaPredicted RBP11.62□□□□□ -0.55
HIF3A-202ENST00000244303 A6NNC1 897 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 INS-IGF2F8WCM5 200 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 SERF1AO75920 110 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 RANP62826 216 aaKnown RBP11.62□□□□□ -0.55
HIF3A-202ENST00000244303 UBE2L3P68036 154 aaKnown RBP11.62□□□□□ -0.55
HIF3A-202ENST00000244303 TDRG1Q3Y452 100 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 LRRC10Q5BKY1 277 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 OR5AU1Q8NGC0 362 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 VN1R17PQ8TDU5 208 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 IGF2BP2-AS1Q96M15 143 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 VAMP8Q9BV40 100 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 ZNF430Q9H8G1 570 aaPredicted RBP11.62□□□□□ -0.55
HIF3A-202ENST00000244303 DNAJC4Q9NNZ3 241 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 OSTCQ9NRP0 149 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 CTSZQ9UBR2 303 aa11.62□□□□□ -0.55
HIF3A-202ENST00000244303 F2Z2F3 143 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 IGLV2-23P01705 113 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 FAM87AP0C7U9 286 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 MGST1P10620 155 aaKnown RBP11.61□□□□□ -0.55
HIF3A-202ENST00000244303 BTF3P20290 206 aaKnown RBP11.61□□□□□ -0.55
HIF3A-202ENST00000244303 PPOXP50336 477 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 OR4A5Q8NH83 315 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 VSTM2AQ8TAG5 236 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 TMEM186Q96B77 213 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 MIEN1Q9BRT3 115 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 TNFRSF13BO14836 293 aaPredicted RBP11.61□□□□□ -0.55
HIF3A-202ENST00000244303 PYYP10082 97 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 SLC35B1P78383 322 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 CX3CL1P78423 397 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 IBA57Q5T440 356 aaKnown RBP11.61□□□□□ -0.55
HIF3A-202ENST00000244303 ZNF596Q8TC21 504 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 NPIPB3Q92617 1050 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 ST6GALNAC6Q969X2 333 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 TMEM208Q9BTX3 173 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 GNB1LQ9BYB4 327 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 WASHC3Q9Y3C0 194 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 GOLT1BQ9Y3E0 138 aa11.61□□□□□ -0.55
HIF3A-202ENST00000244303 TRBV9A0A0B4J1U6 114 aa11.6□□□□□ -0.55
HIF3A-202ENST00000244303 ISLRO14498 428 aa11.6□□□□□ -0.55
HIF3A-202ENST00000244303 COX7A2P2O60397 106 aa11.6□□□□□ -0.55
HIF3A-202ENST00000244303 TCL1AP56279 114 aa11.6□□□□□ -0.55
HIF3A-202ENST00000244303 FAM71F2Q6NXP2 309 aa11.6□□□□□ -0.55
HIF3A-202ENST00000244303 LINC00311Q8N616 119 aa11.6□□□□□ -0.55
HIF3A-202ENST00000244303 NHLRC2Q8NBF2 726 aa11.6□□□□□ -0.55
HIF3A-202ENST00000244303 RNF2Q99496 336 aa11.6□□□□□ -0.55
HIF3A-202ENST00000244303 TPSG1Q9NRR2 321 aa11.6□□□□□ -0.55
HIF3A-202ENST00000244303 ZNF355PQ9NSJ1 428 aa11.6□□□□□ -0.55
HIF3A-202ENST00000244303 IGKV1D-37A0A075B6S9 117 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms