RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 SAA1P0DJI8 122 aaPredicted RBP10.07□□□□□ -0.8
NUP88-201ENST00000225696 C8orf88P0DMB2 117 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 HNRNPA3P51991 378 aaKnown RBP10.07□□□□□ -0.8
NUP88-201ENST00000225696 UBE2L3P68036 154 aaKnown RBP10.07□□□□□ -0.8
NUP88-201ENST00000225696 RUSC1-AS1Q66K80 236 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 PRR27Q6MZM9 219 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 UNQ5815/PRO19632Q6UWF5 114 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 FAM216BQ8N7L0 139 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 NUP35Q8NFH5 326 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 MBD6Q96DN6 1003 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 ZNF71Q9NQZ8 489 aaPredicted RBP10.07□□□□□ -0.8
NUP88-201ENST00000225696 SLC35D1Q9NTN3 355 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 RAI1Q7Z5J4 1906 aaPredicted RBP10.06□□□□□ -0.8
NUP88-201ENST00000225696 SH2D7A6NKC9 451 aaPredicted RBP10.06□□□□□ -0.8
NUP88-201ENST00000225696 NKX2-8O15522 239 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 PLAUP00749 431 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 IGHG3P01860 377 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 CRYABP02511 175 aaKnown RBP10.06□□□□□ -0.8
NUP88-201ENST00000225696 TSPOP30536 169 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 CCL11P51671 97 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 GNG5P63218 68 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 POU2AF1Q16633 256 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 Q56UQ5 140 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 PATE2Q6UY27 113 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 PNKDQ8N490 385 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 NUDT10Q8NFP7 164 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 FDCSPQ8NFU4 85 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 PPP1R35Q8TAP8 253 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 CORO2AQ92828 525 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 NUDT11Q96G61 164 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 CCL13Q99616 98 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 TUBG2Q9NRH3 451 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 MRPL36Q9P0J6 103 aaKnown RBP10.06□□□□□ -0.8
NUP88-201ENST00000225696 DKK4Q9UBT3 224 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 PRNDQ9UKY0 176 aa10.06□□□□□ -0.8
NUP88-201ENST00000225696 FNDC10F2Z333 226 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 M0QZ24 198 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 CDX4O14627 284 aaPredicted RBP10.05□□□□□ -0.8
NUP88-201ENST00000225696 CFHR2P36980 270 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 CAMPP49913 170 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 PMCHL1Q16048 86 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 HES3Q5TGS1 186 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 ZNF331Q9NQX6 463 aaPredicted RBP10.05□□□□□ -0.8
NUP88-201ENST00000225696 AMMECR1Q9Y4X0 333 aaPredicted RBP10.05□□□□□ -0.8
NUP88-201ENST00000225696 SLC25A15Q9Y619 301 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 REG1BP48304 166 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 SELENOVP59797 346 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 CD69Q07108 199 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 C2orf83Q53S99 150 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 C10orf55Q5SWW7 151 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 C1orf162Q8NEQ5 155 aaPredicted RBP10.05□□□□□ -0.8
NUP88-201ENST00000225696 BORCS7Q96B45 105 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 URB1-AS1Q96HZ7 61 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 FNDC4Q9H6D8 234 aaPredicted RBP10.05□□□□□ -0.8
NUP88-201ENST00000225696 PLSCR4Q9NRQ2 329 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 TNFRSF19Q9NS68 423 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 CLEC5AQ9NY25 188 aa10.05□□□□□ -0.8
NUP88-201ENST00000225696 FAM181BA6NEQ2 426 aa10.04□□□□□ -0.8
NUP88-201ENST00000225696 M0R1B8 84 aa10.04□□□□□ -0.8
NUP88-201ENST00000225696 IGLL1P15814 213 aa10.04□□□□□ -0.8
NUP88-201ENST00000225696 TAS2R45P59539 299 aa10.04□□□□□ -0.8
NUP88-201ENST00000225696 C22orf34Q6ZV56 151 aa10.04□□□□□ -0.8
NUP88-201ENST00000225696 SEM1Q6ZVN7 128 aa10.04□□□□□ -0.8
NUP88-201ENST00000225696 BHLHA15Q7RTS1 189 aaPredicted RBP10.04□□□□□ -0.8
NUP88-201ENST00000225696 ZNF329Q86UD4 541 aa10.04□□□□□ -0.8
NUP88-201ENST00000225696 RNASE8Q8TDE3 154 aaKnown RBP10.04□□□□□ -0.8
NUP88-201ENST00000225696 ZNF257Q9Y2Q1 563 aa10.04□□□□□ -0.8
NUP88-201ENST00000225696 C2orf70A6NJV1 201 aa10.04□□□□□ -0.8
NUP88-201ENST00000225696 ITGB1BP1O14713 200 aa10.04□□□□□ -0.8
NUP88-201ENST00000225696 REG1AP05451 166 aa10.04□□□□□ -0.8
NUP88-201ENST00000225696 DIAPH2-AS1Q14236 149 aa10.04□□□□□ -0.8
NUP88-201ENST00000225696 STUMQ69YW2 141 aa10.04□□□□□ -0.8
NUP88-201ENST00000225696 RNASEKQ6P5S7 137 aaKnown RBP10.04□□□□□ -0.8
NUP88-201ENST00000225696 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.04□□□□□ -0.8
NUP88-201ENST00000225696 ST6GALNAC6Q969X2 333 aa10.04□□□□□ -0.8
NUP88-201ENST00000225696 GAFA1Q96PS6 74 aa10.04□□□□□ -0.8
NUP88-201ENST00000225696 ALKBH7Q9BT30 221 aaPredicted RBP10.04□□□□□ -0.8
NUP88-201ENST00000225696 DYSFO75923 2080 aa10.03□□□□□ -0.8
NUP88-201ENST00000225696 CGB1A6NKQ9 187 aa10.03□□□□□ -0.8
NUP88-201ENST00000225696 HIGD1CA8MV81 97 aa10.03□□□□□ -0.8
NUP88-201ENST00000225696 FSTL3O95633 263 aa10.03□□□□□ -0.8
NUP88-201ENST00000225696 LINC00322Q6ZN03 302 aaPredicted RBP10.03□□□□□ -0.8
NUP88-201ENST00000225696 C19orf35Q6ZS72 473 aa10.03□□□□□ -0.8
NUP88-201ENST00000225696 LINC00173Q6ZV60 143 aa10.03□□□□□ -0.8
NUP88-201ENST00000225696 ERASQ7Z444 233 aa10.03□□□□□ -0.8
NUP88-201ENST00000225696 RPRMLQ8N4K4 120 aa10.03□□□□□ -0.8
NUP88-201ENST00000225696 OR4F17Q8NGA8 305 aa10.03□□□□□ -0.8
NUP88-201ENST00000225696 MRPL20Q9BYC9 149 aaKnown RBP10.03□□□□□ -0.8
NUP88-201ENST00000225696 EP300Q09472 2414 aaPredicted RBP10.03□□□□□ -0.8
NUP88-201ENST00000225696 IGKV1D-37A0A075B6S9 117 aa10.02□□□□□ -0.8
NUP88-201ENST00000225696 PRR33A8MZF0 331 aa10.02□□□□□ -0.8
NUP88-201ENST00000225696 M0R2Z0 102 aa10.02□□□□□ -0.8
NUP88-201ENST00000225696 HSBP1O75506 76 aa10.02□□□□□ -0.8
NUP88-201ENST00000225696 PCP4P48539 62 aa10.02□□□□□ -0.8
NUP88-201ENST00000225696 RPL19P84098 196 aaKnown RBP10.02□□□□□ -0.8
NUP88-201ENST00000225696 WT1-ASQ06250 92 aa10.02□□□□□ -0.8
NUP88-201ENST00000225696 TBR1Q16650 682 aa10.02□□□□□ -0.8
NUP88-201ENST00000225696 SLC25A48Q6ZT89 311 aaKnown RBP10.02□□□□□ -0.8
NUP88-201ENST00000225696 Q71RC1 249 aaPredicted RBP10.02□□□□□ -0.8
NUP88-201ENST00000225696 TCF24Q7RTU0 167 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms