RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 IGKV1-13P0DP09 117 aa11.21□□□□□ -0.62
GABPB1-201ENST00000220429 RPL31P62899 125 aaKnown RBP11.21□□□□□ -0.62
GABPB1-201ENST00000220429 SRSF6Q13247 344 aaKnown RBP11.21□□□□□ -0.62
GABPB1-201ENST00000220429 ZNF585BQ52M93 769 aa11.21□□□□□ -0.62
GABPB1-201ENST00000220429 LINC00173Q6ZV60 143 aa11.21□□□□□ -0.62
GABPB1-201ENST00000220429 OR52E5Q8NH55 327 aa11.21□□□□□ -0.62
GABPB1-201ENST00000220429 ZNF331Q9NQX6 463 aaPredicted RBP11.21□□□□□ -0.62
GABPB1-201ENST00000220429 TMEM140Q9NV12 185 aa11.21□□□□□ -0.62
GABPB1-201ENST00000220429 PIGBOS1A0A0B4J2F0 54 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 PGLYRP1O75594 196 aaPredicted RBP11.2□□□□□ -0.62
GABPB1-201ENST00000220429 F2RP25116 425 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 WFDC2Q14508 124 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 TIMM23BQ5SRD1 257 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 TMEM14EPQ6UXP3 125 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 OR10X1Q8NGY0 326 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 VGLL1Q99990 258 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 ANAPC13Q9BS18 74 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 YAE1D1Q9NRH1 226 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 CYSLTR1Q9Y271 337 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 OR2W1Q9Y3N9 320 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 TRGV5A0A0B4J1U4 118 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 SH2D7A6NKC9 451 aaPredicted RBP11.2□□□□□ -0.62
GABPB1-201ENST00000220429 F8W1H4 67 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 LEPROTL1O95214 131 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 PF4V1P10720 104 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 RPL8P62917 257 aaKnown RBP11.2□□□□□ -0.62
GABPB1-201ENST00000220429 TMEM211Q6ICI0 200 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 PIP4P1Q86T03 277 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 SPXQ9BT56 116 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 NDFIP1Q9BT67 221 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 RABAC1Q9UI14 185 aa11.2□□□□□ -0.62
GABPB1-201ENST00000220429 PLP2Q04941 152 aa11.19□□□□□ -0.62
GABPB1-201ENST00000220429 FXYD3Q14802 87 aa11.19□□□□□ -0.62
GABPB1-201ENST00000220429 RAB1CQ92928 201 aa11.19□□□□□ -0.62
GABPB1-201ENST00000220429 GRAMD2BQ96HH9 432 aa11.19□□□□□ -0.62
GABPB1-201ENST00000220429 MTCH1Q9NZJ7 389 aa11.19□□□□□ -0.62
GABPB1-201ENST00000220429 IL36RNQ9UBH0 155 aa11.19□□□□□ -0.62
GABPB1-201ENST00000220429 DSPP15924 2871 aaKnown RBP11.19□□□□□ -0.62
GABPB1-201ENST00000220429 A0A1W2PPV4 95 aa11.19□□□□□ -0.62
GABPB1-201ENST00000220429 ACP7Q6ZNF0 438 aa11.19□□□□□ -0.62
GABPB1-201ENST00000220429 TTC9CQ8N5M4 171 aa11.19□□□□□ -0.62
GABPB1-201ENST00000220429 RNASE7Q9H1E1 156 aaKnown RBP11.19□□□□□ -0.62
GABPB1-201ENST00000220429 ZNF318Q5VUA4 2279 aa11.19□□□□□ -0.62
GABPB1-201ENST00000220429 FAM90A10PA6NDY2 464 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 FAM90A18PA6NE21 464 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 FAM90A16PA6NEW6 464 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 FAM90A20PA6NIJ5 464 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 FAM90A8PA6NJQ4 464 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 FAM90A7PA6NKC0 464 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 LRRC30A6NM36 301 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 FAM90A22PA8MWA6 464 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 FAM90A12PA8MX19 464 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 FAM90A5PA8MXJ8 464 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 FAM90A23PA8MXZ1 464 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 CLDN14O95500 239 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 FAM90A15PP0C7V4 464 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 FAM90A13PP0C7W8 464 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 FAM90A14PP0C7W9 464 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 FAM90A24PP0C7X0 464 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 PSG2P11465 335 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 FGF12P61328 243 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 RAX2Q96IS3 184 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 RALYQ9UKM9 306 aaKnown RBP11.18□□□□□ -0.62
GABPB1-201ENST00000220429 TRGV10A0A0A0MS01 117 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 NKX2-8O15522 239 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 SYNGR1O43759 233 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 OR9G9P0C7N8 305 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 SPINK2P20155 84 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 FCGR2BP31994 310 aaPredicted RBP11.18□□□□□ -0.62
GABPB1-201ENST00000220429 ETDBQ3ZM63 59 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 SH2D6Q7Z4S9 175 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 TMEM178AQ8NBL3 297 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 DEFB124Q8NES8 71 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 OR51H1Q8NH63 302 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 MCRIP2Q9BUT9 160 aaKnown RBP11.18□□□□□ -0.62
GABPB1-201ENST00000220429 OSTCQ9NRP0 149 aa11.18□□□□□ -0.62
GABPB1-201ENST00000220429 SMIM27A0A1W2PRY6 76 aa11.17□□□□□ -0.62
GABPB1-201ENST00000220429 GCSAMLQ5JQS6 135 aa11.17□□□□□ -0.62
GABPB1-201ENST00000220429 SSX8Q7RTT4 187 aa11.17□□□□□ -0.62
GABPB1-201ENST00000220429 MDP1Q86V88 176 aa11.17□□□□□ -0.62
GABPB1-201ENST00000220429 OR4A16Q8NH70 328 aa11.17□□□□□ -0.62
GABPB1-201ENST00000220429 URB1-AS1Q96HZ7 61 aa11.17□□□□□ -0.62
GABPB1-201ENST00000220429 GGTLC1Q9BX51 225 aa11.17□□□□□ -0.62
GABPB1-201ENST00000220429 IZUMO1RA6ND01 250 aa11.17□□□□□ -0.62
GABPB1-201ENST00000220429 ARL14EPLP0DKL9 152 aa11.17□□□□□ -0.62
GABPB1-201ENST00000220429 FAM162BQ5T6X4 162 aa11.17□□□□□ -0.62
GABPB1-201ENST00000220429 GCSAMQ8N6F7 178 aa11.17□□□□□ -0.62
GABPB1-201ENST00000220429 H1FXQ92522 213 aaKnown RBP11.17□□□□□ -0.62
GABPB1-201ENST00000220429 MAP1LC3CQ9BXW4 147 aa11.17□□□□□ -0.62
GABPB1-201ENST00000220429 MBNL3Q9NUK0 354 aaKnown RBP11.17□□□□□ -0.62
GABPB1-201ENST00000220429 LAMA5O15230 3695 aa11.17□□□□□ -0.62
GABPB1-201ENST00000220429 PRR14LQ5THK1 2151 aa11.17□□□□□ -0.62
GABPB1-201ENST00000220429 IGHV1-24A0A0C4DH33 117 aa11.16□□□□□ -0.62
GABPB1-201ENST00000220429 ZNF562Q6V9R5 426 aa11.16□□□□□ -0.62
GABPB1-201ENST00000220429 YTHDF2Q9Y5A9 579 aaKnown RBP11.16□□□□□ -0.62
GABPB1-201ENST00000220429 IGHV3-7P01780 117 aa11.16□□□□□ -0.62
GABPB1-201ENST00000220429 VWC2Q2TAL6 325 aa11.16□□□□□ -0.62
GABPB1-201ENST00000220429 MKXQ8IYA7 352 aa11.16□□□□□ -0.62
GABPB1-201ENST00000220429 WIPF2Q8TF74 440 aaPredicted RBP11.16□□□□□ -0.62
GABPB1-201ENST00000220429 LRRC29Q8WV35 223 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms