RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 CRPP02741 224 aa15.73■□□□□ 0.11
SMPD3-201ENST00000219334 UBE2DNLQ8IWF7 75 aa15.73■□□□□ 0.11
SMPD3-201ENST00000219334 ZNF257Q9Y2Q1 563 aa15.73■□□□□ 0.11
SMPD3-201ENST00000219334 CNTFRP26992 372 aa15.72■□□□□ 0.11
SMPD3-201ENST00000219334 Q0VFX4 171 aa15.72■□□□□ 0.11
SMPD3-201ENST00000219334 TMEM219Q86XT9 240 aa15.72■□□□□ 0.11
SMPD3-201ENST00000219334 VGLL1Q99990 258 aa15.72■□□□□ 0.11
SMPD3-201ENST00000219334 TRGV11A0A075B6L2 103 aa15.72■□□□□ 0.11
SMPD3-201ENST00000219334 HEPN1Q6WQI6 88 aa15.72■□□□□ 0.11
SMPD3-201ENST00000219334 APOHP02749 345 aaPredicted RBP15.72■□□□□ 0.11
SMPD3-201ENST00000219334 LOC102724200A0A096LPH7 203 aaPredicted RBP15.71■□□□□ 0.11
SMPD3-201ENST00000219334 H3BUX3 64 aa15.71■□□□□ 0.11
SMPD3-201ENST00000219334 OR10J3Q5JRS4 329 aa15.71■□□□□ 0.11
SMPD3-201ENST00000219334 MBD3L4A6NDZ8 208 aaPredicted RBP15.71■□□□□ 0.11
SMPD3-201ENST00000219334 MBD3L3A6NE82 208 aaPredicted RBP15.71■□□□□ 0.11
SMPD3-201ENST00000219334 MBD3L5A6NJ08 208 aaPredicted RBP15.71■□□□□ 0.11
SMPD3-201ENST00000219334 EFNA2O43921 213 aa15.71■□□□□ 0.11
SMPD3-201ENST00000219334 IGHV1-8P0DP01 117 aa15.71■□□□□ 0.11
SMPD3-201ENST00000219334 ATP5G3P48201 142 aa15.71■□□□□ 0.11
SMPD3-201ENST00000219334 MBD3L2Q8NHZ7 208 aaPredicted RBP15.71■□□□□ 0.11
SMPD3-201ENST00000219334 SLC17A3O00476 420 aa15.71■□□□□ 0.11
SMPD3-201ENST00000219334 PMCHL2Q9BQD1 86 aa15.71■□□□□ 0.11
SMPD3-201ENST00000219334 ZNF319Q9P2F9 582 aa15.71■□□□□ 0.11
SMPD3-201ENST00000219334 ABCA4P78363 2273 aa15.71■□□□□ 0.11
SMPD3-201ENST00000219334 TMEM50AO95807 157 aa15.71■□□□□ 0.1
SMPD3-201ENST00000219334 RAMP3O60896 148 aa15.7■□□□□ 0.1
SMPD3-201ENST00000219334 NAT1P18440 290 aa15.7■□□□□ 0.1
SMPD3-201ENST00000219334 FBLN7Q53RD9 439 aa15.7■□□□□ 0.1
SMPD3-201ENST00000219334 PSMG4Q5JS54 123 aa15.7■□□□□ 0.1
SMPD3-201ENST00000219334 ORMDL3Q8N138 153 aa15.7■□□□□ 0.1
SMPD3-201ENST00000219334 OVOL1O14753 267 aa15.7■□□□□ 0.1
SMPD3-201ENST00000219334 LYPD3O95274 346 aa15.7■□□□□ 0.1
SMPD3-201ENST00000219334 TMEM200BQ69YZ2 307 aa15.7■□□□□ 0.1
SMPD3-201ENST00000219334 PTPRFP10586 1907 aa15.7■□□□□ 0.1
SMPD3-201ENST00000219334 SRD5A1P18405 259 aa15.7■□□□□ 0.1
SMPD3-201ENST00000219334 TMEM183AQ8IXX5 376 aa15.7■□□□□ 0.1
SMPD3-201ENST00000219334 BRD3OSQ6XYD6 125 aa15.7■□□□□ 0.1
SMPD3-201ENST00000219334 C3orf56Q8N813 242 aa15.7■□□□□ 0.1
SMPD3-201ENST00000219334 K7ERU9 68 aa15.69■□□□□ 0.1
SMPD3-201ENST00000219334 TPTE2P1Q5T6R2 138 aa15.69■□□□□ 0.1
SMPD3-201ENST00000219334 SP5Q6BEB4 398 aaPredicted RBP15.69■□□□□ 0.1
SMPD3-201ENST00000219334 ST20Q9HBF5 79 aa15.69■□□□□ 0.1
SMPD3-201ENST00000219334 ZNF646O15015 1829 aaPredicted RBP15.69■□□□□ 0.1
SMPD3-201ENST00000219334 CD33P20138 364 aa15.69■□□□□ 0.1
SMPD3-201ENST00000219334 CACNA1DQ01668 2161 aa15.69■□□□□ 0.1
SMPD3-201ENST00000219334 KLRD1Q13241 179 aa15.69■□□□□ 0.1
SMPD3-201ENST00000219334 SRSF6Q13247 344 aaKnown RBP15.69■□□□□ 0.1
SMPD3-201ENST00000219334 SIGLEC15Q6ZMC9 328 aa15.69■□□□□ 0.1
SMPD3-201ENST00000219334 RALGAPA1Q6GYQ0 2036 aa15.69■□□□□ 0.1
SMPD3-201ENST00000219334 FAM90A9PA6NNJ1 464 aa15.69■□□□□ 0.1
SMPD3-201ENST00000219334 CD5P06127 495 aa15.68■□□□□ 0.1
SMPD3-201ENST00000219334 FAM89BQ8N5H3 189 aa15.68■□□□□ 0.1
SMPD3-201ENST00000219334 NHLRC3Q5JS37 347 aa15.68■□□□□ 0.1
SMPD3-201ENST00000219334 FOXC2Q99958 501 aa15.68■□□□□ 0.1
SMPD3-201ENST00000219334 ANKRD36A6QL64 1941 aa15.68■□□□□ 0.1
SMPD3-201ENST00000219334 THADAQ6YHU6 1953 aa15.68■□□□□ 0.1
SMPD3-201ENST00000219334 SELLP14151 372 aa15.68■□□□□ 0.1
SMPD3-201ENST00000219334 ZNF324BQ6AW86 544 aaPredicted RBP15.68■□□□□ 0.1
SMPD3-201ENST00000219334 LINC01356Q8N9X3 169 aa15.68■□□□□ 0.1
SMPD3-201ENST00000219334 LOC285556D6RIA3 1793 aa15.68■□□□□ 0.1
SMPD3-201ENST00000219334 IFI27P40305 119 aaPredicted RBP15.68■□□□□ 0.1
SMPD3-201ENST00000219334 ERVK11-1P61568 191 aa15.68■□□□□ 0.1
SMPD3-201ENST00000219334 C15orf32Q32M92 178 aa15.68■□□□□ 0.1
SMPD3-201ENST00000219334 TCF23Q7RTU1 214 aa15.68■□□□□ 0.1
SMPD3-201ENST00000219334 C18orf12Q96KH6 178 aa15.68■□□□□ 0.1
SMPD3-201ENST00000219334 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.67■□□□□ 0.1
SMPD3-201ENST00000219334 M0R1W7 72 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 MLNRO43193 412 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 PAQR4Q8N4S7 273 aaPredicted RBP15.67■□□□□ 0.1
SMPD3-201ENST00000219334 RNF5Q99942 180 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 VCX2Q9H322 139 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 LILRA1O75019 489 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 GNG5P63218 68 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 ZNF362Q5T0B9 420 aaPredicted RBP15.67■□□□□ 0.1
SMPD3-201ENST00000219334 DPH3P1Q9H4G8 78 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 POLEQ07864 2286 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 IGHV1-3A0A0C4DH29 117 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 K7ENP7 123 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 ATOH7Q8N100 152 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 SBF2Q86WG5 1849 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 PATJQ8NI35 1801 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 ZNF415Q09FC8 603 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 BMPERQ8N8U9 685 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 NUDT10Q8NFP7 164 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 OR9G4Q8NGQ1 327 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 EPDR1Q9UM22 224 aa15.67■□□□□ 0.1
SMPD3-201ENST00000219334 IGHG3P01860 377 aa15.66■□□□□ 0.1
SMPD3-201ENST00000219334 NABP1Q96AH0 204 aa15.66■□□□□ 0.1
SMPD3-201ENST00000219334 RNF114Q9Y508 228 aa15.66■□□□□ 0.1
SMPD3-201ENST00000219334 MPTX1A8MV57 137 aa15.66■□□□□ 0.1
SMPD3-201ENST00000219334 SOD3P08294 240 aa15.66■□□□□ 0.1
SMPD3-201ENST00000219334 CRIM1Q9NZV1 1036 aa15.66■□□□□ 0.1
SMPD3-201ENST00000219334 RBMY1BA6NDE4 496 aaKnown RBP15.66■□□□□ 0.1
SMPD3-201ENST00000219334 RBMY1EA6NEQ0 496 aaKnown RBP15.66■□□□□ 0.1
SMPD3-201ENST00000219334 RBMY1DP0C7P1 496 aaKnown RBP15.66■□□□□ 0.1
SMPD3-201ENST00000219334 RBMY1A1P0DJD3 496 aaKnown RBP15.66■□□□□ 0.1
SMPD3-201ENST00000219334 RBMY1CP0DJD4 496 aa15.66■□□□□ 0.1
SMPD3-201ENST00000219334 CHCHD5Q9BSY4 110 aa15.66■□□□□ 0.1
SMPD3-201ENST00000219334 PSG8Q9UQ74 426 aa15.66■□□□□ 0.1
SMPD3-201ENST00000219334 TRBV7-9A0A0J9YWB2 115 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms