RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 ANAPC16Q96DE5 110 aa17.63■□□□□ 0.41
HOXC8-201ENST00000040584 TXNDC17Q9BRA2 123 aa17.63■□□□□ 0.41
HOXC8-201ENST00000040584 OR51M1Q9H341 326 aa17.63■□□□□ 0.41
HOXC8-201ENST00000040584 SLC25A22Q9H936 323 aa17.63■□□□□ 0.41
HOXC8-201ENST00000040584 SOX21Q9Y651 276 aaPredicted RBP17.63■□□□□ 0.41
HOXC8-201ENST00000040584 SAA1P0DJI8 122 aaPredicted RBP17.62■□□□□ 0.41
HOXC8-201ENST00000040584 S100A2P29034 98 aa17.62■□□□□ 0.41
HOXC8-201ENST00000040584 CDC34P49427 236 aaPredicted RBP17.62■□□□□ 0.41
HOXC8-201ENST00000040584 BSXQ3C1V8 233 aa17.62■□□□□ 0.41
HOXC8-201ENST00000040584 SLC16A13Q7RTY0 426 aa17.62■□□□□ 0.41
HOXC8-201ENST00000040584 NIT2Q9NQR4 276 aa17.62■□□□□ 0.41
HOXC8-201ENST00000040584 KCNIP2Q9NS61 270 aa17.62■□□□□ 0.41
HOXC8-201ENST00000040584 IGLV2-23P01705 113 aa17.61■□□□□ 0.41
HOXC8-201ENST00000040584 BET1LQ9NYM9 111 aa17.61■□□□□ 0.41
HOXC8-201ENST00000040584 MYO9AB2RTY4 2548 aa17.61■□□□□ 0.41
HOXC8-201ENST00000040584 IFNA10P01566 189 aa17.61■□□□□ 0.41
HOXC8-201ENST00000040584 CNTFRP26992 372 aa17.61■□□□□ 0.41
HOXC8-201ENST00000040584 LGALS7P47929 136 aa17.61■□□□□ 0.41
HOXC8-201ENST00000040584 HNF4GQ14541 408 aa17.61■□□□□ 0.41
HOXC8-201ENST00000040584 FBLN7Q53RD9 439 aa17.61■□□□□ 0.41
HOXC8-201ENST00000040584 HEYLQ9NQ87 328 aaPredicted RBP17.61■□□□□ 0.41
HOXC8-201ENST00000040584 GAR1Q9NY12 217 aaKnown RBP17.61■□□□□ 0.41
HOXC8-201ENST00000040584 CSPG4Q6UVK1 2322 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 A0A0U1RQK1 487 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 PDE6DO43924 150 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 HIST1H2BKO60814 126 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 TRGC2P03986 189 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 HIST1H2BJP06899 126 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 HIST1H2BOP23527 126 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 HIST1H2BBP33778 126 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 OPRK1P41145 380 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 HIST1H2BDP58876 126 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 HIST1H2BCP62807 126 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 HIST2H2BEQ16778 126 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.6■□□□□ 0.41
HOXC8-201ENST00000040584 OR4F5Q8NH21 305 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 HIST1H2BHQ93079 126 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 OR5B12Q96R08 314 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 OR4F4Q96R69 305 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 HIST1H2BNQ99877 126 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 HIST1H2BMQ99879 126 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 TMEM14BQ9NUH8 114 aa17.6■□□□□ 0.41
HOXC8-201ENST00000040584 C15orf61A6NNL5 157 aa17.59■□□□□ 0.41
HOXC8-201ENST00000040584 FABP1P07148 127 aa17.59■□□□□ 0.41
HOXC8-201ENST00000040584 VDAC2P45880 294 aaPredicted RBP17.59■□□□□ 0.41
HOXC8-201ENST00000040584 ADIRFQ15847 76 aa17.59■□□□□ 0.41
HOXC8-201ENST00000040584 PYGO2Q9BRQ0 406 aa17.59■□□□□ 0.41
HOXC8-201ENST00000040584 FOXA2Q9Y261 457 aaPredicted RBP17.59■□□□□ 0.41
HOXC8-201ENST00000040584 A0A1W2PPV4 95 aa17.58■□□□□ 0.41
HOXC8-201ENST00000040584 UPK2O00526 184 aa17.58■□□□□ 0.41
HOXC8-201ENST00000040584 SLC25A17O43808 307 aa17.58■□□□□ 0.41
HOXC8-201ENST00000040584 HES1Q14469 280 aa17.58■□□□□ 0.41
HOXC8-201ENST00000040584 FAM120AOSQ5T036 256 aa17.58■□□□□ 0.41
HOXC8-201ENST00000040584 EAF1Q96JC9 268 aaPredicted RBP17.58■□□□□ 0.41
HOXC8-201ENST00000040584 PARLQ9H300 379 aa17.58■□□□□ 0.41
HOXC8-201ENST00000040584 PPP1R2P9O14990 202 aa17.58■□□□□ 0.4
HOXC8-201ENST00000040584 MOSP00540 346 aa17.58■□□□□ 0.4
HOXC8-201ENST00000040584 RPL23P62829 140 aaKnown RBP17.58■□□□□ 0.4
HOXC8-201ENST00000040584 VSTM2AQ8TAG5 236 aa17.58■□□□□ 0.4
HOXC8-201ENST00000040584 RNF5Q99942 180 aa17.58■□□□□ 0.4
HOXC8-201ENST00000040584 SRD5A3Q9H8P0 318 aa17.58■□□□□ 0.4
HOXC8-201ENST00000040584 ZFHX3Q15911 3703 aa17.58■□□□□ 0.4
HOXC8-201ENST00000040584 FLNBO75369 2602 aaKnown RBP17.57■□□□□ 0.4
HOXC8-201ENST00000040584 VMA21Q3ZAQ7 101 aa17.57■□□□□ 0.4
HOXC8-201ENST00000040584 RPUSD4Q96CM3 377 aaKnown RBP17.57■□□□□ 0.4
HOXC8-201ENST00000040584 BTF3L4Q96K17 158 aa17.57■□□□□ 0.4
HOXC8-201ENST00000040584 GSN-AS1Q9NRJ2 163 aa17.57■□□□□ 0.4
HOXC8-201ENST00000040584 TPSG1Q9NRR2 321 aa17.57■□□□□ 0.4
HOXC8-201ENST00000040584 F6UZH7 168 aa17.56■□□□□ 0.4
HOXC8-201ENST00000040584 PAGE4O60829 102 aa17.56■□□□□ 0.4
HOXC8-201ENST00000040584 YIF1AO95070 293 aa17.56■□□□□ 0.4
HOXC8-201ENST00000040584 PFN1P07737 140 aaKnown RBP17.56■□□□□ 0.4
HOXC8-201ENST00000040584 MYOD1P15172 320 aa17.56■□□□□ 0.4
HOXC8-201ENST00000040584 PSG5Q15238 335 aa17.56■□□□□ 0.4
HOXC8-201ENST00000040584 SPINK9Q5DT21 86 aa17.56■□□□□ 0.4
HOXC8-201ENST00000040584 OR2T10Q8NGZ9 312 aa17.56■□□□□ 0.4
HOXC8-201ENST00000040584 OR4A5Q8NH83 315 aa17.56■□□□□ 0.4
HOXC8-201ENST00000040584 TMEM167AQ8TBQ9 72 aa17.56■□□□□ 0.4
HOXC8-201ENST00000040584 NPVFQ9HCQ7 196 aa17.56■□□□□ 0.4
HOXC8-201ENST00000040584 PRNDQ9UKY0 176 aa17.56■□□□□ 0.4
HOXC8-201ENST00000040584 H7BYZ3 331 aa17.56■□□□□ 0.4
HOXC8-201ENST00000040584 BRS3P32247 399 aa17.56■□□□□ 0.4
HOXC8-201ENST00000040584 TRGC1P0CF51 173 aa17.55■□□□□ 0.4
HOXC8-201ENST00000040584 ATP5IP56385 69 aaPredicted RBP17.55■□□□□ 0.4
HOXC8-201ENST00000040584 DNLZQ5SXM8 178 aa17.55■□□□□ 0.4
HOXC8-201ENST00000040584 C16orf82Q7Z2V1 217 aa17.55■□□□□ 0.4
HOXC8-201ENST00000040584 ENY2Q9NPA8 101 aa17.55■□□□□ 0.4
HOXC8-201ENST00000040584 TCF19Q9Y242 345 aa17.55■□□□□ 0.4
HOXC8-201ENST00000040584 ZNF257Q9Y2Q1 563 aa17.55■□□□□ 0.4
HOXC8-201ENST00000040584 TNCP24821 2201 aa17.55■□□□□ 0.4
HOXC8-201ENST00000040584 C11orf94C9JXX5 98 aa17.54■□□□□ 0.4
HOXC8-201ENST00000040584 FNDC10F2Z333 226 aa17.54■□□□□ 0.4
HOXC8-201ENST00000040584 HMGB3O15347 200 aaKnown RBP17.54■□□□□ 0.4
HOXC8-201ENST00000040584 CRYGBP07316 175 aa17.54■□□□□ 0.4
HOXC8-201ENST00000040584 FAM106CPP0CH98 169 aa17.54■□□□□ 0.4
HOXC8-201ENST00000040584 CD99P14209 185 aa17.54■□□□□ 0.4
HOXC8-201ENST00000040584 SRP14P37108 136 aaKnown RBP17.54■□□□□ 0.4
HOXC8-201ENST00000040584 HSPE1P61604 102 aaKnown RBP17.54■□□□□ 0.4
HOXC8-201ENST00000040584 KRTAP1-1Q07627 177 aa17.54■□□□□ 0.4
HOXC8-201ENST00000040584 RAB31Q13636 194 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms