RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 AREGP15514 252 aa10.39□□□□□ -0.75
PHGDH-221ENST00000641573 FGF7P21781 194 aa10.39□□□□□ -0.75
PHGDH-221ENST00000641573 TMEM182Q6ZP80 229 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-221ENST00000641573 HSD17B13Q7Z5P4 300 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-221ENST00000641573 PIFOQ8TCI5 191 aa10.39□□□□□ -0.75
PHGDH-221ENST00000641573 ABHD5Q8WTS1 349 aa10.39□□□□□ -0.75
PHGDH-221ENST00000641573 SSMEM1Q8WWF3 244 aa10.39□□□□□ -0.75
PHGDH-221ENST00000641573 TAF15Q92804 592 aaKnown RBP eCLIP10.39□□□□□ -0.75
PHGDH-221ENST00000641573 P2RX4Q99571 388 aa10.39□□□□□ -0.75
PHGDH-221ENST00000641573 SSX3Q99909 188 aa10.39□□□□□ -0.75
PHGDH-221ENST00000641573 RASL11BQ9BPW5 248 aa10.39□□□□□ -0.75
PHGDH-221ENST00000641573 SRSF8Q9BRL6 282 aaKnown RBP10.39□□□□□ -0.75
PHGDH-221ENST00000641573 TGP01266 2768 aa10.39□□□□□ -0.75
PHGDH-221ENST00000641573 MGAM2Q2M2H8 2515 aa10.38□□□□□ -0.75
PHGDH-221ENST00000641573 SMCO3A2RU48 225 aa10.38□□□□□ -0.75
PHGDH-221ENST00000641573 ZNF705EA8MWA4 302 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-221ENST00000641573 FSHBP01225 129 aa10.38□□□□□ -0.75
PHGDH-221ENST00000641573 APELAP0DMC3 54 aa10.38□□□□□ -0.75
PHGDH-221ENST00000641573 CX3CL1P78423 397 aa10.38□□□□□ -0.75
PHGDH-221ENST00000641573 ZNF562Q6V9R5 426 aa10.38□□□□□ -0.75
PHGDH-221ENST00000641573 IL17RELQ6ZVW7 336 aa10.38□□□□□ -0.75
PHGDH-221ENST00000641573 ZNF114Q8NC26 417 aa10.38□□□□□ -0.75
PHGDH-221ENST00000641573 NANPQ8TBE9 248 aa10.38□□□□□ -0.75
PHGDH-221ENST00000641573 CXorf58Q96LI9 332 aa10.38□□□□□ -0.75
PHGDH-221ENST00000641573 SLC25A33Q9BSK2 321 aa10.38□□□□□ -0.75
PHGDH-221ENST00000641573 PSMG3Q9BT73 122 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-221ENST00000641573 RSG1Q9BU20 258 aa10.38□□□□□ -0.75
PHGDH-221ENST00000641573 WDR83OSQ9Y284 106 aa10.38□□□□□ -0.75
PHGDH-221ENST00000641573 TCF21O43680 179 aa10.37□□□□□ -0.75
PHGDH-221ENST00000641573 ATP6V1G1O75348 118 aa10.37□□□□□ -0.75
PHGDH-221ENST00000641573 HLA-DRB1P01911 266 aa10.37□□□□□ -0.75
PHGDH-221ENST00000641573 MDKP21741 143 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-221ENST00000641573 RAB5CP51148 216 aa10.37□□□□□ -0.75
PHGDH-221ENST00000641573 AANATQ16613 207 aa10.37□□□□□ -0.75
PHGDH-221ENST00000641573 ARSJQ5FYB0 599 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-221ENST00000641573 BTNL8Q6UX41 500 aa10.37□□□□□ -0.75
PHGDH-221ENST00000641573 BCL6BQ8N143 479 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-221ENST00000641573 RNASEH2CQ8TDP1 164 aaKnown RBP10.37□□□□□ -0.75
PHGDH-221ENST00000641573 ARPC1AQ92747 370 aa10.37□□□□□ -0.75
PHGDH-221ENST00000641573 SAT2Q96F10 170 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-221ENST00000641573 RBM14Q96PK6 669 aaKnown RBP10.37□□□□□ -0.75
PHGDH-221ENST00000641573 TIMM9Q9Y5J7 89 aa10.37□□□□□ -0.75
PHGDH-221ENST00000641573 TENM1Q9UKZ4 2725 aa10.37□□□□□ -0.75
PHGDH-221ENST00000641573 IGHV7-81A0A0B4J1V7 117 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 MDFIC2A0A1B0GVS7 189 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 A6NDX4 124 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 UMAD1C9J7I0 102 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 FNDC10F2Z333 226 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 H3BUX3 64 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 PRH1P02810 166 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 GPX4P36969 197 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-221ENST00000641573 BLOC1S1P78537 153 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 NDPQ00604 133 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 CD69Q07108 199 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 LY6EQ16553 131 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 DEFB112Q30KQ8 113 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 PVRIGQ6DKI7 326 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 TREML4Q6UXN2 200 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 C19orf35Q6ZS72 473 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 CENPVQ7Z7K6 275 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-221ENST00000641573 TMEM219Q86XT9 240 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 OR1P1Q8NH06 330 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 SGMS2Q8NHU3 365 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 FAM103A1Q9BTL3 118 aaKnown RBP10.36□□□□□ -0.75
PHGDH-221ENST00000641573 NPVFQ9HCQ7 196 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 MOB4Q9Y3A3 225 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 FBXO7Q9Y3I1 522 aa10.36□□□□□ -0.75
PHGDH-221ENST00000641573 F11RQ9Y624 299 aaKnown RBP10.36□□□□□ -0.75
PHGDH-221ENST00000641573 TNCP24821 2201 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 TRIM77I1YAP6 450 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 CAMLGP49069 296 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 MFAP2P55001 183 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 AKR1C1Q04828 323 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 MLANAQ16655 118 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 AKR1C8PQ5T2L2 129 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 Q6ZRG5 221 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 C9orf139Q6ZV77 190 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 SLC16A13Q7RTY0 426 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 COMMD7Q86VX2 200 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 C5orf56Q8N8D9 126 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 ZNF709Q8N972 641 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 CACNG8Q8WXS5 425 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 SLC35E1Q96K37 410 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 HSPB9Q9BQS6 159 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 NPCDR1Q9BY65 106 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 MED9Q9NWA0 146 aa10.35□□□□□ -0.75
PHGDH-221ENST00000641573 SH2D7A6NKC9 451 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-221ENST00000641573 C17orf112F2Z3M2 114 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 MPDU1O75352 247 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 CTRB1P17538 263 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 OPRK1P41145 380 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 FHITP49789 147 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 SERF2P84101 59 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 GAMTQ14353 236 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 PXDC1Q5TGL8 231 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 ASPHD1Q5U4P2 390 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 CTRB2Q6GPI1 263 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 FAM213BQ8TBF2 198 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 C22orf15Q8WYQ4 148 aa10.34□□□□□ -0.75
PHGDH-221ENST00000641573 MISP3Q96FF7 219 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms