RNA–Protein interactions for RNA: ENST00000637671.1

SYNGAP1-223, Transcript of synaptic Ras GTPase activating protein 1, human

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNGAP1-223	ENST00000637671	FAM24B	Q8N5W8	94 aa		8.46	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	MAPKAPK5-AS1	Q8N8E1	139 aa		8.46	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	CLEC5A	Q9NY25	188 aa		8.46	□□□□□ -1.06
SYNGAP1-223	ENST00000637671		A0A1W2PS18	150 aa		8.45	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	KNCN	A6PVL3	124 aa		8.45	□□□□□ -1.06
SYNGAP1-223	ENST00000637671		I3L2K1	104 aa		8.45	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	MT-CO2	P00403	227 aa		8.45	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	HERV-K104	P61576	105 aa		8.45	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	ACTL10	Q5JWF8	245 aa		8.45	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	C1orf134	Q5TEV5	83 aa		8.45	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	TOMM20L	Q6UXN7	152 aa		8.45	□□□□□ -1.06
SYNGAP1-223	ENST00000637671		Q6ZR54	194 aa		8.45	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	STXBP6	Q8NFX7	210 aa		8.45	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	GRAMD2B	Q96HH9	432 aa		8.45	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	NSG2	Q9Y328	171 aa		8.45	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	KRAS	P01116	189 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	IGHV3-48	P01763	117 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	APOH	P02749	345 aa	Predicted RBP	8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	CD74	P04233	296 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	RLN1	P04808	185 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	ZNF688	P0C7X2	276 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	PTHLH	P12272	177 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	F2R	P25116	425 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	G6PC	P35575	357 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	NPBWR1	P48145	328 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	NUTF2	P61970	127 aa	Known RBP	8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	OGFRL1	Q5TC84	451 aa	Predicted RBP	8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671		Q6ZRM9	215 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	HOGA1	Q86XE5	327 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	CADM3	Q8N126	398 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	PINX1	Q96BK5	328 aa	Known RBP	8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	MOB3A	Q96BX8	217 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	FAM210B	Q96KR6	192 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	TSC22D3	Q99576	134 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	C1QTNF4	Q9BXJ3	329 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	DUSP21	Q9H596	190 aa		8.44	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	SMIM30	A4D0T7	59 aa		8.43	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	NOTO	A8MTQ0	251 aa		8.43	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	NPPC	P23582	126 aa		8.43	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	ZNF600	Q6ZNG1	722 aa		8.43	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	ZNF367	Q7RTV3	350 aa		8.43	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	PRSS48	Q7RTY5	328 aa		8.43	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	LILRB2	Q8N423	598 aa		8.43	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	CSNK1G2-AS1	Q8NCQ2	148 aa		8.43	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	NARS2	Q96I59	477 aa	Known RBP	8.43	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	NDUFB11	Q9NX14	153 aa		8.43	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	PUS1	Q9Y606	427 aa	Known RBP eCLIP	8.43	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	LRP1B	Q9NZR2	4599 aa		8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	TRDV1	A0A1B0GX56	115 aa		8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671		K7EQG2	157 aa		8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	SCGB2A1	O75556	95 aa		8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	LPAR6	P43657	344 aa		8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	EIF2B2	P49770	351 aa	Known RBP	8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	RNF212	Q495C1	297 aa		8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	KCTD21	Q4G0X4	260 aa		8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	C22orf42	Q6IC83	251 aa		8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	CMTM1	Q8IZ96	169 aa		8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	ZNF114	Q8NC26	417 aa		8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	FCAMR	Q8WWV6	532 aa		8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	METTL26	Q96S19	204 aa		8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	SCRT1	Q9BWW7	348 aa		8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	RHBDL2	Q9NX52	303 aa		8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	DAPK2	Q9UIK4	370 aa		8.42	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	TRAV18	A0A075B6X5	111 aa		8.41	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	TEX48	A0A1B0GUV7	120 aa		8.41	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	TMEM189	A5PLL7	270 aa		8.41	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	PGLYRP1	O75594	196 aa	Predicted RBP	8.41	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	SPART-AS1	P0CW21	52 aa		8.41	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	GNRHR	P30968	328 aa		8.41	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	FGF9	P31371	208 aa	Predicted RBP	8.41	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	P2RY1	P47900	373 aa		8.41	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	OR5AP2	Q8NGF4	316 aa		8.41	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	OR4A16	Q8NH70	328 aa		8.41	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	LGALS14	Q8TCE9	139 aa		8.41	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	ZFAND3	Q9H8U3	227 aa		8.41	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	DBX1	A6NMT0	343 aa		8.4	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	FCER2	P06734	321 aa		8.4	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	CBX5	P45973	191 aa		8.4	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	EMP1	P54849	157 aa		8.4	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	ERH	P84090	104 aa	Known RBP	8.4	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	PRCD	Q00LT1	54 aa		8.4	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	TBCE	Q15813	527 aa	Predicted RBP	8.4	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	PSMG4	Q5JS54	123 aa		8.4	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	RAB40C	Q96S21	281 aa		8.4	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	RNF167	Q9H6Y7	350 aa		8.4	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	EHF	Q9NZC4	300 aa		8.4	□□□□□ -1.06
SYNGAP1-223	ENST00000637671	XCL2	Q9UBD3	114 aa		8.4	□□□□□ -1.06
SYNGAP1-223	ENST00000637671		A0A0A6YYH2	397 aa		8.39	□□□□□ -1.07
SYNGAP1-223	ENST00000637671	HELT	A6NFD8	242 aa		8.39	□□□□□ -1.07
SYNGAP1-223	ENST00000637671		A6NJ64	397 aa		8.39	□□□□□ -1.07
SYNGAP1-223	ENST00000637671	S100G	P29377	79 aa		8.39	□□□□□ -1.07
SYNGAP1-223	ENST00000637671	SNRPD3	P62318	126 aa	Known RBP	8.39	□□□□□ -1.07
SYNGAP1-223	ENST00000637671	DHRS2	Q13268	280 aa		8.39	□□□□□ -1.07
SYNGAP1-223	ENST00000637671	H2BFWT	Q7Z2G1	175 aa		8.39	□□□□□ -1.07
SYNGAP1-223	ENST00000637671		Q8N1X5	172 aa		8.39	□□□□□ -1.07
SYNGAP1-223	ENST00000637671	DCANP1	Q8TF63	244 aa		8.39	□□□□□ -1.07
SYNGAP1-223	ENST00000637671	IFT46	Q9NQC8	304 aa		8.39	□□□□□ -1.07
SYNGAP1-223	ENST00000637671	RRP15	Q9Y3B9	282 aa	Known RBP	8.39	□□□□□ -1.07
SYNGAP1-223	ENST00000637671	TMED3	Q9Y3Q3	217 aa		8.39	□□□□□ -1.07
SYNGAP1-223	ENST00000637671		A0A1B0GU03	582 aa		8.38	□□□□□ -1.07

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms