RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 IGHV4-31P0DP07 118 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 PAX8Q06710 450 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 CMTM2Q8TAZ6 248 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 TAF15Q92804 592 aaKnown RBP eCLIP10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 LINC00869P0C866 280 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 TOR2AQ5JU69 321 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 BCL6BQ8N143 479 aaPredicted RBP10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 TRAV41A0A0B4J266 112 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 RD3LP0DJH9 198 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 CDC34P49427 236 aaPredicted RBP10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 OR8I2Q8N0Y5 310 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 C8orf31Q8N9H6 132 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 BLNKQ8WV28 456 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 HCFC1P51610 2035 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 ITPR1Q14643 2758 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 IGHV3OR16-13A0A075B7E8 117 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 IGHV3-74A0A0B4J1X5 117 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 PAX1P15863 534 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 GPR183P32249 361 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 PSMB3P49720 205 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 DLX6P56179 175 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 RHOGP84095 191 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 C5orf30Q96GV9 206 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 RITA1Q96K30 269 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 ZNF257Q9Y2Q1 563 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 PXMP4Q9Y6I8 212 aa10.04□□□□□ -0.8
SCAMP1-207ENST00000621999 PROP1O75360 226 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 RHOBP62745 196 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 FAM90A9PA6NNJ1 464 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 F8W036 122 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 RAB5CP51148 216 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 PEA15Q15121 130 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 CLEC19AQ6UXS0 136 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 ZNF429Q86V71 674 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 ODF3L1Q8IXM7 274 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 TMEM231Q9H6L2 316 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 C21orf62Q9NYP8 219 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 A8MXK9 166 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 FN1P02751 2386 aaKnown RBP10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 MAP1LC3B2A6NCE7 125 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 RNF222A6NCQ9 220 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 GATA2P23769 480 aaPredicted RBP10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 C16orf82Q7Z2V1 217 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 PIP4P2Q8N4L2 257 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 OR1L4Q8NGR5 311 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 EEF1AKMT3Q96AZ1 226 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 MAP1LC3BQ9GZQ8 125 aa10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 GAR1Q9NY12 217 aaKnown RBP10.03□□□□□ -0.8
SCAMP1-207ENST00000621999 A0A1W2PPI3 338 aa10.02□□□□□ -0.81
SCAMP1-207ENST00000621999 G3V318 75 aa10.02□□□□□ -0.81
SCAMP1-207ENST00000621999 PXDC1Q5TGL8 231 aa10.02□□□□□ -0.81
SCAMP1-207ENST00000621999 ZNF562Q6V9R5 426 aa10.02□□□□□ -0.81
SCAMP1-207ENST00000621999 UHRF2Q96PU4 802 aa10.02□□□□□ -0.81
SCAMP1-207ENST00000621999 SOX21Q9Y651 276 aaPredicted RBP10.02□□□□□ -0.81
SCAMP1-207ENST00000621999 TNFRSF13BO14836 293 aaPredicted RBP10.02□□□□□ -0.81
SCAMP1-207ENST00000621999 C10orf113Q5VZT2 155 aa10.02□□□□□ -0.81
SCAMP1-207ENST00000621999 OR4X2Q8NGF9 303 aa10.02□□□□□ -0.81
SCAMP1-207ENST00000621999 OR52E5Q8NH55 327 aa10.02□□□□□ -0.81
SCAMP1-207ENST00000621999 SH3BGRL3Q9H299 93 aa10.02□□□□□ -0.81
SCAMP1-207ENST00000621999 IGHV3-49A0A0A0MS15 119 aa10.02□□□□□ -0.81
SCAMP1-207ENST00000621999 IGLV2-14P01704 120 aa10.02□□□□□ -0.81
SCAMP1-207ENST00000621999 ATP6V0E1O15342 81 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 HIST1H1BP16401 226 aaKnown RBP10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 ATP5IP56385 69 aaPredicted RBP10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 NOL4LQ96MY1 436 aaPredicted RBP10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 TIMM9Q9Y5J7 89 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 F8P00451 2351 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 OR2T8A6NH00 312 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 ZNF207O43670 478 aaKnown RBP10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 HYPMO75409 117 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 S100A1P23297 94 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 KIAA0141Q14154 515 aaPredicted RBP10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 MLANAQ16655 118 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 MARC2Q969Z3 335 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 BSCL2Q96G97 398 aaPredicted RBP10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 A0A087X0M5 115 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 A0A1B0GX30 115 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 RXFP4Q8TDU9 374 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 FOXC2Q99958 501 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 A0A0G2JLM5 398 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 DLK1P80370 383 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 C19orf35Q6ZS72 473 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 C1orf229Q6ZS94 237 aaPredicted RBP10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 CIARTQ8N365 385 aaPredicted RBP10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 OR4F5Q8NH21 305 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 OR4F4Q96R69 305 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 LINC00574Q9H8X3 128 aa10.01□□□□□ -0.81
SCAMP1-207ENST00000621999 CFDP00746 253 aaPredicted RBP10□□□□□ -0.81
SCAMP1-207ENST00000621999 OR4F17Q8NGA8 305 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 TOLLIPQ9H0E2 274 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 NBEAQ8NFP9 2946 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 MPDU1O75352 247 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 IL4P05112 153 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 SELENOTP62341 195 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 RPEL1Q2QD12 228 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 GRAMD2BQ96HH9 432 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 PFDN5Q99471 154 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 CDC42EP3Q9UKI2 254 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 PSMB11A5LHX3 300 aa10□□□□□ -0.81
SCAMP1-207ENST00000621999 FCGR2BP31994 310 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms