RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 SMPXQ9UHP9 88 aa15.31■□□□□ 0.04
SMC6-210ENST00000621152 C15orf62A8K5M9 175 aa15.3■□□□□ 0.04
SMC6-210ENST00000621152 ST8SIA3O43173 380 aa15.3■□□□□ 0.04
SMC6-210ENST00000621152 CTSDP07339 412 aaPredicted RBP15.3■□□□□ 0.04
SMC6-210ENST00000621152 SNCAP37840 140 aa15.3■□□□□ 0.04
SMC6-210ENST00000621152 ETV6P41212 452 aa15.3■□□□□ 0.04
SMC6-210ENST00000621152 MRPS10P82664 201 aaKnown RBP15.3■□□□□ 0.04
SMC6-210ENST00000621152 SSBP1Q04837 148 aaKnown RBP15.3■□□□□ 0.04
SMC6-210ENST00000621152 DIRAS2Q96HU8 199 aa15.3■□□□□ 0.04
SMC6-210ENST00000621152 UBQLN2Q9UHD9 624 aa15.3■□□□□ 0.04
SMC6-210ENST00000621152 P0C879 139 aa15.29■□□□□ 0.04
SMC6-210ENST00000621152 FCGR2BP31994 310 aaPredicted RBP15.29■□□□□ 0.04
SMC6-210ENST00000621152 MEF2DQ14814 521 aa15.29■□□□□ 0.04
SMC6-210ENST00000621152 FAAP20Q6NZ36 180 aa15.29■□□□□ 0.04
SMC6-210ENST00000621152 SLC35G3Q8N808 338 aa15.29■□□□□ 0.04
SMC6-210ENST00000621152 RRNAD1Q96FB5 475 aaKnown RBP15.29■□□□□ 0.04
SMC6-210ENST00000621152 ZNF414Q96IQ9 312 aa15.29■□□□□ 0.04
SMC6-210ENST00000621152 PDCD10Q9BUL8 212 aa15.29■□□□□ 0.04
SMC6-210ENST00000621152 DISC1C4P0D8 188 aa15.28■□□□□ 0.04
SMC6-210ENST00000621152 GNG7O60262 68 aa15.28■□□□□ 0.04
SMC6-210ENST00000621152 UCP1P25874 307 aa15.28■□□□□ 0.04
SMC6-210ENST00000621152 IL18Q14116 193 aa15.28■□□□□ 0.04
SMC6-210ENST00000621152 TMEM116Q8NCL8 245 aa15.28■□□□□ 0.04
SMC6-210ENST00000621152 RNASE11Q8TAA1 199 aaKnown RBP15.28■□□□□ 0.04
SMC6-210ENST00000621152 RAB2BQ8WUD1 216 aa15.28■□□□□ 0.04
SMC6-210ENST00000621152 RTBDNQ9BSG5 229 aaPredicted RBP15.28■□□□□ 0.04
SMC6-210ENST00000621152 NXF2Q9GZY0 626 aaKnown RBP15.28■□□□□ 0.04
SMC6-210ENST00000621152 C14orf166Q9Y224 244 aaKnown RBP15.28■□□□□ 0.04
SMC6-210ENST00000621152 IGHV3-49A0A0A0MS15 119 aa15.27■□□□□ 0.04
SMC6-210ENST00000621152 IGHV7-4-1A0A0J9YVY3 117 aa15.27■□□□□ 0.04
SMC6-210ENST00000621152 SUB1P53999 127 aaKnown RBP eCLIP15.27■□□□□ 0.04
SMC6-210ENST00000621152 TMBIM6P55061 237 aa15.27■□□□□ 0.04
SMC6-210ENST00000621152 DUSP18Q8NEJ0 188 aa15.27■□□□□ 0.04
SMC6-210ENST00000621152 IL17DQ8TAD2 202 aa15.27■□□□□ 0.04
SMC6-210ENST00000621152 DYNC2LI1Q8TCX1 351 aa15.27■□□□□ 0.04
SMC6-210ENST00000621152 SMIM4Q8WVI0 70 aa15.27■□□□□ 0.04
SMC6-210ENST00000621152 RHPN1-AS1Q9BWJ2 59 aa15.27■□□□□ 0.04
SMC6-210ENST00000621152 TRAV14DV4A0A0A6YYC5 116 aa15.26■□□□□ 0.03
SMC6-210ENST00000621152 A0A0G2JRQ6 117 aa15.26■□□□□ 0.03
SMC6-210ENST00000621152 TEX13DA0A0J9YY54 714 aaPredicted RBP15.26■□□□□ 0.03
SMC6-210ENST00000621152 INS-IGF2F8WCM5 200 aa15.26■□□□□ 0.03
SMC6-210ENST00000621152 CHEK1O14757 476 aa15.26■□□□□ 0.03
SMC6-210ENST00000621152 B3GALNT1O75752 331 aa15.26■□□□□ 0.03
SMC6-210ENST00000621152 NPBWR1P48145 328 aa15.26■□□□□ 0.03
SMC6-210ENST00000621152 Q6ZRM9 215 aa15.26■□□□□ 0.03
SMC6-210ENST00000621152 RNF2Q99496 336 aa15.26■□□□□ 0.03
SMC6-210ENST00000621152 OVOL2Q9BRP0 275 aa15.26■□□□□ 0.03
SMC6-210ENST00000621152 ENY2Q9NPA8 101 aa15.26■□□□□ 0.03
SMC6-210ENST00000621152 RABL2AQ9UBK7 228 aaPredicted RBP15.26■□□□□ 0.03
SMC6-210ENST00000621152 RABL2BQ9UNT1 228 aa15.26■□□□□ 0.03
SMC6-210ENST00000621152 RYR3Q15413 4870 aa15.25■□□□□ 0.03
SMC6-210ENST00000621152 OR4C46A6NHA9 309 aa15.25■□□□□ 0.03
SMC6-210ENST00000621152 CTDSPLO15194 276 aa15.25■□□□□ 0.03
SMC6-210ENST00000621152 CDS2O95674 445 aa15.25■□□□□ 0.03
SMC6-210ENST00000621152 OR5AC1P0C628 307 aa15.25■□□□□ 0.03
SMC6-210ENST00000621152 AKAIN1P0CW23 69 aa15.25■□□□□ 0.03
SMC6-210ENST00000621152 GLYATL2Q8WU03 294 aa15.25■□□□□ 0.03
SMC6-210ENST00000621152 OR10C1Q96KK4 312 aa15.25■□□□□ 0.03
SMC6-210ENST00000621152 BCL7BQ9BQE9 202 aa15.25■□□□□ 0.03
SMC6-210ENST00000621152 TMEM222Q9H0R3 208 aa15.25■□□□□ 0.03
SMC6-210ENST00000621152 CCDC59Q9P031 241 aaKnown RBP15.25■□□□□ 0.03
SMC6-210ENST00000621152 GPR132Q9UNW8 380 aa15.25■□□□□ 0.03
SMC6-210ENST00000621152 IGHV3OR16-13A0A075B7E8 117 aa15.24■□□□□ 0.03
SMC6-210ENST00000621152 IGHV3-74A0A0B4J1X5 117 aa15.24■□□□□ 0.03
SMC6-210ENST00000621152 LCE6AA0A183 80 aa15.24■□□□□ 0.03
SMC6-210ENST00000621152 TMEM50AO95807 157 aa15.24■□□□□ 0.03
SMC6-210ENST00000621152 RNASE2P10153 161 aaKnown RBP15.24■□□□□ 0.03
SMC6-210ENST00000621152 HOXA1P49639 335 aaPredicted RBP15.24■□□□□ 0.03
SMC6-210ENST00000621152 TOMM20LQ6UXN7 152 aa15.24■□□□□ 0.03
SMC6-210ENST00000621152 OR4C16Q8NGL9 310 aa15.24■□□□□ 0.03
SMC6-210ENST00000621152 C6orf62Q9GZU0 229 aaPredicted RBP15.24■□□□□ 0.03
SMC6-210ENST00000621152 NAA60Q9H7X0 242 aa15.24■□□□□ 0.03
SMC6-210ENST00000621152 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.24■□□□□ 0.03
SMC6-210ENST00000621152 IGKV3-7A0A075B6H7 116 aa15.23■□□□□ 0.03
SMC6-210ENST00000621152 RPL5P46777 297 aaKnown RBP15.23■□□□□ 0.03
SMC6-210ENST00000621152 TFPI2P48307 235 aa15.23■□□□□ 0.03
SMC6-210ENST00000621152 DHODHQ02127 395 aa15.23■□□□□ 0.03
SMC6-210ENST00000621152 SURF2Q15527 256 aaPredicted RBP15.23■□□□□ 0.03
SMC6-210ENST00000621152 MLANAQ16655 118 aa15.23■□□□□ 0.03
SMC6-210ENST00000621152 ODF3L2Q3SX64 289 aa15.23■□□□□ 0.03
SMC6-210ENST00000621152 PVRIGQ6DKI7 326 aa15.23■□□□□ 0.03
SMC6-210ENST00000621152 SELENOHQ8IZQ5 122 aaKnown RBP15.23■□□□□ 0.03
SMC6-210ENST00000621152 DNAH7Q8WXX0 4024 aa15.22■□□□□ 0.03
SMC6-210ENST00000621152 CORTO00230 105 aa15.22■□□□□ 0.03
SMC6-210ENST00000621152 APOC4P55056 127 aa15.22■□□□□ 0.03
SMC6-210ENST00000621152 SPCS3P61009 180 aa15.22■□□□□ 0.03
SMC6-210ENST00000621152 FAM219AQ8IW50 185 aa15.22■□□□□ 0.03
SMC6-210ENST00000621152 OR51S1Q8NGJ8 323 aa15.22■□□□□ 0.03
SMC6-210ENST00000621152 LHFPL5Q8TAF8 219 aa15.22■□□□□ 0.03
SMC6-210ENST00000621152 GPR146Q96CH1 333 aa15.22■□□□□ 0.03
SMC6-210ENST00000621152 PRRT1Q99946 306 aa15.22■□□□□ 0.03
SMC6-210ENST00000621152 GINS3Q9BRX5 216 aa15.22■□□□□ 0.03
SMC6-210ENST00000621152 TENM2Q9NT68 2774 aa15.22■□□□□ 0.03
SMC6-210ENST00000621152 ANKRD20A5PA0PJZ0 165 aa15.21■□□□□ 0.03
SMC6-210ENST00000621152 NOL3O60936 208 aaKnown RBP15.21■□□□□ 0.03
SMC6-210ENST00000621152 RPL35AP18077 110 aaKnown RBP15.21■□□□□ 0.03
SMC6-210ENST00000621152 TNFSF8P32971 234 aa15.21■□□□□ 0.03
SMC6-210ENST00000621152 CMC4P56277 68 aaPredicted RBP15.21■□□□□ 0.03
SMC6-210ENST00000621152 ZNF600Q6ZNG1 722 aa15.21■□□□□ 0.03
SMC6-210ENST00000621152 GBGT1Q8N5D6 347 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms