RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 C1QTNF9P0C862 333 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.97□□□□□ -1.29
ALMS1-208ENST00000620466 C2orf88Q9BSF0 95 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 NTN3O00634 580 aaPredicted RBP6.97□□□□□ -1.29
ALMS1-208ENST00000620466 CEACAM4O75871 244 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 CEACAM1P13688 526 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 HTN3P15516 51 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 OTX1P32242 354 aaPredicted RBP6.97□□□□□ -1.29
ALMS1-208ENST00000620466 NUTF2P61970 127 aaKnown RBP6.97□□□□□ -1.29
ALMS1-208ENST00000620466 GFI1BQ5VTD9 330 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 PPP1R27Q86WC6 154 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 C1QL4Q86Z23 238 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 MBNL2Q5VZF2 373 aaKnown RBP6.97□□□□□ -1.29
ALMS1-208ENST00000620466 WDR82Q6UXN9 313 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 TMEM136Q6ZRR5 245 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 DNM1P46Q6ZS02 220 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 FOXL2NBQ6ZUU3 175 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 GOLT1AQ6ZVE7 132 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 C1orf162Q8NEQ5 155 aaPredicted RBP6.97□□□□□ -1.29
ALMS1-208ENST00000620466 FAM57AQ8TBR7 257 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 SLX1AQ9BQ83 275 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 FAM27E3Q08E93 113 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 JOSD1Q15040 202 aaPredicted RBP6.97□□□□□ -1.29
ALMS1-208ENST00000620466 NMSQ5H8A3 153 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 TMEM42Q69YG0 159 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 PEMTQ9UBM1 199 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 KBTBD11-OT1A0A1B0GTJ5 212 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 SUMO2P61956 95 aaKnown RBP6.97□□□□□ -1.29
ALMS1-208ENST00000620466 HIST3H2BBQ8N257 126 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 C9orf106Q8NAJ2 232 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 OR51G1Q8NGK1 321 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 KCNS1Q96KK3 526 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 SEMA5BQ9P283 1151 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 TNFRSF18Q9Y5U5 241 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 HELZP42694 1942 aaKnown RBP6.97□□□□□ -1.29
ALMS1-208ENST00000620466 HEATR5BQ9P2D3 2071 aa6.96□□□□□ -1.29
ALMS1-208ENST00000620466 IGHV3-49A0A0A0MS15 119 aa6.96□□□□□ -1.29
ALMS1-208ENST00000620466 COLCA1Q6ZS62 124 aa6.96□□□□□ -1.29
ALMS1-208ENST00000620466 ANAPC10Q9UM13 185 aa6.96□□□□□ -1.29
ALMS1-208ENST00000620466 SAA2-SAA4A0A096LPE2 208 aa6.96□□□□□ -1.29
ALMS1-208ENST00000620466 IGHV3-35A0A0C4DH35 117 aa6.96□□□□□ -1.29
ALMS1-208ENST00000620466 LEPROTL1O95214 131 aa6.96□□□□□ -1.29
ALMS1-208ENST00000620466 SAA2P0DJI9 122 aaPredicted RBP6.96□□□□□ -1.29
ALMS1-208ENST00000620466 FAM216BQ8N7L0 139 aa6.96□□□□□ -1.29
ALMS1-208ENST00000620466 ARPC1AQ92747 370 aa6.96□□□□□ -1.29
ALMS1-208ENST00000620466 LINC01587Q99440 93 aa6.96□□□□□ -1.29
ALMS1-208ENST00000620466 FBLL1A6NHQ2 334 aaKnown RBP6.96□□□□□ -1.3
ALMS1-208ENST00000620466 GATA2P23769 480 aaPredicted RBP6.96□□□□□ -1.3
ALMS1-208ENST00000620466 ASIPP42127 132 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 B3GALT5-AS1P59052 145 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 NSUN5P1Q3KNT7 163 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 CLEC19AQ6UXS0 136 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 LINC00469Q8N7U9 141 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 KIR2DL4Q99706 377 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 FOXA2Q9Y261 457 aaPredicted RBP6.96□□□□□ -1.3
ALMS1-208ENST00000620466 KIAA1671Q9BY89 1806 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 ZNF883P0CG24 379 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 FABP2P12104 132 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 CACNG7P62955 275 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 MORN2Q502X0 79 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 TBL2Q9Y4P3 447 aaKnown RBP6.96□□□□□ -1.3
ALMS1-208ENST00000620466 IGHV3OR16-13A0A075B7E8 117 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 IGHV3-74A0A0B4J1X5 117 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 CTAG1AP78358 180 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 TEX45Q8NA69 505 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 FBXL7Q9UJT9 491 aa6.96□□□□□ -1.3
ALMS1-208ENST00000620466 TRBV20OR9-2A0A075B6H5 130 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 NAPSAO96009 420 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 TIMM23BQ5SRD1 257 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 COL25A1Q9BXS0 654 aaPredicted RBP6.95□□□□□ -1.3
ALMS1-208ENST00000620466 GLRXP35754 106 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 FAM90A1Q86YD7 464 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 MRPL20Q9BYC9 149 aaKnown RBP6.95□□□□□ -1.3
ALMS1-208ENST00000620466 TMEM242Q9NWH2 141 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 PGPEP1LA6NFU8 196 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 C15orf61A6NNL5 157 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 C9JQL5 133 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 YPEL1O60688 119 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 LILRA1O75019 489 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 ABHD17AQ96GS6 310 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 YPEL2Q96QA6 119 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 BEX4Q9NWD9 120 aaPredicted RBP6.95□□□□□ -1.3
ALMS1-208ENST00000620466 TRAV9-1A0A075B6T8 112 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 TM4SF5O14894 197 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 IGKV1-5P01602 117 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 ATP5IP56385 69 aaPredicted RBP6.95□□□□□ -1.3
ALMS1-208ENST00000620466 STHQ8IWL8 128 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 TMEM70Q9BUB7 260 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 WNT10AQ9GZT5 417 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 CDKN1AP38936 164 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 HBBP68871 147 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 HIST1H2BLQ99880 126 aa6.95□□□□□ -1.3
ALMS1-208ENST00000620466 TRAV1-1A0A0B4J248 108 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 PEX7O00628 323 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 HLA-DRB1P01911 266 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 DPRXA6NFQ7 191 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 TBR1Q16650 682 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 ASCL4Q6XD76 172 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 OR10AG1Q8NH19 301 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 RNASE7Q9H1E1 156 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms