RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	DUX4L5	P0CJ88	424 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	DUX4L6	P0CJ89	424 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	DUX4L7	P0CJ90	424 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	FGF7	P21781	194 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	UCP1	P25874	307 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	C5orf56	Q8N8D9	126 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	SCCPDH	Q8NBX0	429 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	VN1R17P	Q8TDU5	208 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	PINX1	Q96BK5	328 aa	Known RBP	4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	BANF2	Q9H503	90 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	DUX4	Q9UBX2	424 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	FN1	P02751	2386 aa	Known RBP	4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322		A0A1W2PRD5	423 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322		A0A1W2PRF3	423 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322		A0A1W2PRM7	423 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	XKRY2	A2RUG3	117 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	HPRT1	P00492	218 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	CRYGB	P07316	175 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	FCGR3A	P08637	254 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	PSG2	P11465	335 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	CAV2	P51636	162 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	VAMP3	Q15836	100 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	GUK1	Q16774	197 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	HLA-DRB5	Q30154	266 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	TMEM41B	Q5BJD5	291 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	CFAP161	Q6P656	301 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	PRSS54	Q6PEW0	395 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	UQCC3	Q6UW78	93 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	FAM213B	Q8TBF2	198 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	UBE2E2	Q96LR5	201 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	PLXNB1	O43157	2135 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	RYR2	Q92736	4967 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	CRTAP	O75718	401 aa	Predicted RBP	4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	NAPSA	O96009	420 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR5H8	P0DN80	308 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	ELOB	Q15370	118 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	ASPHD1	Q5U4P2	390 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	STXBP6	Q8NFX7	210 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR10C1	Q96KK4	312 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	C19orf12	Q9NSK7	152 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	AK3	Q9UIJ7	227 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	ANXA10	Q9UJ72	324 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	LSM5	Q9Y4Y9	91 aa	Known RBP	4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	ABCA4	P78363	2273 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	PCNX1	Q96RV3	2341 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322		A0A1W2PPI3	338 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	CSTB	P04080	98 aa	Known RBP	4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR5G3	P0C626	314 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	C8orf88	P0DMB2	117 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	PSMB8	P28062	276 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	SNU13	P55769	128 aa	Known RBP	4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	RBM11	P57052	281 aa	Known RBP	4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	DLK1	P80370	383 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	SMAGP	Q0VAQ4	97 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	PRDX4	Q13162	271 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	SPRN	Q5BIV9	151 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	SMIM8	Q96KF7	97 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	SCRT1	Q9BWW7	348 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	CLEC7A	Q9BXN2	247 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	NRN1	Q9NPD7	142 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	SLC35D1	Q9NTN3	355 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	C14orf166	Q9Y224	244 aa	Known RBP	4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	SVIL	O95425	2214 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	LCE6A	A0A183	80 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	C15orf65	H3BRN8	121 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	AMY1A	P04745	511 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	IL6R	P08887	468 aa	Predicted RBP	4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	TPT1	P13693	172 aa	Known RBP	4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	PPIF	P30405	207 aa	Known RBP	4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	MAS1L	P35410	378 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	CYCS	P99999	105 aa	Known RBP	4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	RAB32	Q13637	225 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	TMEM187	Q14656	261 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	HMGN3	Q15651	99 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	SOHLH1	Q5JUK2	328 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	DPPA3	Q6W0C5	159 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	ZNF66	Q6ZN08	573 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	CYB561D1	Q8N8Q1	229 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR2Z1	Q8NG97	314 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	MOB3A	Q96BX8	217 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	GTSF1L	Q9H1H1	148 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	TAF9B	Q9HBM6	251 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	JPT1	Q9UK76	154 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	FUT9	Q9Y231	359 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	MYO9A	B2RTY4	2548 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322	DNAH2	Q9P225	4427 aa		4.24	□□□□□ -1.73
CBWD3-215	ENST00000619322		A0A1B0GU03	582 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322		H3BQ15	152 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	CIDEA	O60543	219 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	DEDD	O75618	318 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	TUSC2	O75896	110 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	NRAS	P01111	189 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	GLRA1	P23415	457 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	FAM3B	P58499	235 aa	Predicted RBP	4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	RND3	P61587	244 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	C6orf201	Q7Z4U5	140 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	CD177	Q8N6Q3	437 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR5H2	Q8NGV7	314 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms