RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 AREGP15514 252 aa13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 CD24P25063 80 aa13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 OR10J1P30954 320 aa13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 COMPP49747 757 aaPredicted RBP13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 RHEBQ15382 184 aa13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 FAM209BQ5JX69 171 aa13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 C19orf35Q6ZS72 473 aa13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 NIPSNAP3BQ9BS92 247 aa13.89□□□□□ -0.19
PCDHGC3-205ENST00000617641 ZNF98A6NK75 572 aa13.88□□□□□ -0.19
PCDHGC3-205ENST00000617641 FCN1O00602 326 aa13.88□□□□□ -0.19
PCDHGC3-205ENST00000617641 PAGE4O60829 102 aa13.88□□□□□ -0.19
PCDHGC3-205ENST00000617641 IGHV3-48P01763 117 aa13.88□□□□□ -0.19
PCDHGC3-205ENST00000617641 GATA2P23769 480 aaPredicted RBP13.88□□□□□ -0.19
PCDHGC3-205ENST00000617641 GPX4P36969 197 aaPredicted RBP13.88□□□□□ -0.19
PCDHGC3-205ENST00000617641 SUB1P53999 127 aaKnown RBP eCLIP13.88□□□□□ -0.19
PCDHGC3-205ENST00000617641 SPATA31B1PQ5VZV4 182 aa13.88□□□□□ -0.19
PCDHGC3-205ENST00000617641 CACNG8Q8WXS5 425 aa13.88□□□□□ -0.19
PCDHGC3-205ENST00000617641 SIRPDQ9H106 197 aa13.88□□□□□ -0.19
PCDHGC3-205ENST00000617641 DOPEY1Q5JWR5 2465 aa13.88□□□□□ -0.19
PCDHGC3-205ENST00000617641 IGHV2-70DA0A0C4DH43 119 aa13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 ARL14EPLP0DKL9 152 aa13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 PLGLAQ15195 96 aa13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 FBLN7Q53RD9 439 aa13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 RNASEH2CQ8TDP1 164 aaKnown RBP13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 SLC35E1Q96K37 410 aa13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 RBM14Q96PK6 669 aaKnown RBP13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 RNF5Q99942 180 aa13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 SEPSECSQ9HD40 501 aaKnown RBP13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 ZFYVE26Q68DK2 2539 aa13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 USP9XQ93008 2570 aaPredicted RBP13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 MAS1LP35410 378 aa13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 SSBP2P81877 361 aaPredicted RBP13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 MMDQ15546 238 aa13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 SSX2Q16385 188 aa13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 DYNAPQ8N1N2 210 aa13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 CCL19Q99731 98 aa13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 MED13LQ71F56 2210 aa13.87□□□□□ -0.19
PCDHGC3-205ENST00000617641 STAG3L2P0CL84 134 aa13.86□□□□□ -0.19
PCDHGC3-205ENST00000617641 STAG3L3P0CL85 134 aa13.86□□□□□ -0.19
PCDHGC3-205ENST00000617641 TVP23CQ96ET8 276 aa13.86□□□□□ -0.19
PCDHGC3-205ENST00000617641 PDLIM4P50479 330 aa13.86□□□□□ -0.19
PCDHGC3-205ENST00000617641 MFAP2P55001 183 aa13.86□□□□□ -0.19
PCDHGC3-205ENST00000617641 UBE2G2P60604 165 aa13.86□□□□□ -0.19
PCDHGC3-205ENST00000617641 HABP2Q14520 560 aaPredicted RBP13.86□□□□□ -0.19
PCDHGC3-205ENST00000617641 TMEM249Q2WGJ8 235 aa13.86□□□□□ -0.19
PCDHGC3-205ENST00000617641 OR4F5Q8NH21 305 aa13.86□□□□□ -0.19
PCDHGC3-205ENST00000617641 ISOC2Q96AB3 205 aa13.86□□□□□ -0.19
PCDHGC3-205ENST00000617641 OR4F4Q96R69 305 aa13.86□□□□□ -0.19
PCDHGC3-205ENST00000617641 WNK2Q9Y3S1 2297 aa13.85□□□□□ -0.19
PCDHGC3-205ENST00000617641 TEX22C9J3V5 150 aa13.85□□□□□ -0.19
PCDHGC3-205ENST00000617641 GOSR1O95249 250 aa13.85□□□□□ -0.19
PCDHGC3-205ENST00000617641 TAGLN2P37802 199 aaKnown RBP13.85□□□□□ -0.19
PCDHGC3-205ENST00000617641 RHOBP62745 196 aa13.85□□□□□ -0.19
PCDHGC3-205ENST00000617641 SPNS3Q6ZMD2 512 aa13.85□□□□□ -0.19
PCDHGC3-205ENST00000617641 MRPL41Q8IXM3 137 aaKnown RBP13.85□□□□□ -0.19
PCDHGC3-205ENST00000617641 MRPL36Q9P0J6 103 aaKnown RBP13.85□□□□□ -0.19
PCDHGC3-205ENST00000617641 COLCA2A8K830 154 aa13.85□□□□□ -0.19
PCDHGC3-205ENST00000617641 TOX4O94842 621 aa13.85□□□□□ -0.19
PCDHGC3-205ENST00000617641 SRSF12Q8WXF0 261 aaKnown RBP13.85□□□□□ -0.19
PCDHGC3-205ENST00000617641 NPIPB3Q92617 1050 aa13.85□□□□□ -0.19
PCDHGC3-205ENST00000617641 MISP3Q96FF7 219 aa13.85□□□□□ -0.19
PCDHGC3-205ENST00000617641 CXorf1O96002 111 aa13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 MOSP00540 346 aa13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 LGALS4P56470 323 aa13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 HES1Q14469 280 aa13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 ARL6IP6Q8N6S5 226 aa13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 EAF1Q96JC9 268 aaPredicted RBP13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 LPAR2Q9HBW0 351 aa13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 NBR2O15453 112 aa13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 FOXH1O75593 365 aa13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 ZNF674Q2M3X9 581 aa13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 FAM78BQ5VT40 261 aa13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 MIR17HGQ75NE6 70 aa13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 ZNF843Q8N446 348 aa13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 ZNF114Q8NC26 417 aa13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 RPUSD4Q96CM3 377 aaKnown RBP13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 TBX15Q96SF7 602 aa13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 KLF2Q9Y5W3 355 aaPredicted RBP13.84□□□□□ -0.19
PCDHGC3-205ENST00000617641 ZNF727A8MUV8 499 aa13.83□□□□□ -0.2
PCDHGC3-205ENST00000617641 C11orf94C9JXX5 98 aa13.83□□□□□ -0.2
PCDHGC3-205ENST00000617641 RUSC1-AS1Q66K80 236 aa13.83□□□□□ -0.2
PCDHGC3-205ENST00000617641 CYP2G1PQ6ZSU1 146 aa13.83□□□□□ -0.2
PCDHGC3-205ENST00000617641 TMEM250H0YL14 139 aa13.82□□□□□ -0.2
PCDHGC3-205ENST00000617641 ATP5G3P48201 142 aa13.82□□□□□ -0.2
PCDHGC3-205ENST00000617641 RND2P52198 227 aa13.82□□□□□ -0.2
PCDHGC3-205ENST00000617641 KIAA0141Q14154 515 aaPredicted RBP13.82□□□□□ -0.2
PCDHGC3-205ENST00000617641 MINOS1Q5TGZ0 78 aa13.82□□□□□ -0.2
PCDHGC3-205ENST00000617641 CST9LP1Q5W188 147 aa13.82□□□□□ -0.2
PCDHGC3-205ENST00000617641 PVRIGQ6DKI7 326 aa13.82□□□□□ -0.2
PCDHGC3-205ENST00000617641 C15orf54Q8N8G6 183 aa13.82□□□□□ -0.2
PCDHGC3-205ENST00000617641 SMIM7Q9BQ49 75 aa13.82□□□□□ -0.2
PCDHGC3-205ENST00000617641 MINOS1-NBL1R4GNA1 71 aa13.82□□□□□ -0.2
PCDHGC3-205ENST00000617641 CNIH1O95406 144 aa13.82□□□□□ -0.2
PCDHGC3-205ENST00000617641 GCHFRP30047 84 aa13.82□□□□□ -0.2
PCDHGC3-205ENST00000617641 CCDC144NLQ6NUI1 221 aa13.82□□□□□ -0.2
PCDHGC3-205ENST00000617641 NPBQ8NG41 125 aa13.82□□□□□ -0.2
PCDHGC3-205ENST00000617641 TUBA4BQ9H853 241 aa13.82□□□□□ -0.2
PCDHGC3-205ENST00000617641 IGKV1D-37A0A075B6S9 117 aa13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 IGHV3-21A0A0B4J1V1 117 aa13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 NDUFA3O95167 84 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms