RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 DMBX1Q8NFW5 382 aa14.3□□□□□ -0.12
CDX1-202ENST00000616154 LHFPL5Q8TAF8 219 aa14.3□□□□□ -0.12
CDX1-202ENST00000616154 ZNF431Q8TF32 576 aaPredicted RBP14.3□□□□□ -0.12
CDX1-202ENST00000616154 MITD1Q8WV92 249 aa14.3□□□□□ -0.12
CDX1-202ENST00000616154 IL22RA2Q969J5 263 aa14.3□□□□□ -0.12
CDX1-202ENST00000616154 NEURL2Q9BR09 285 aa14.3□□□□□ -0.12
CDX1-202ENST00000616154 QTRT1Q9BXR0 403 aaKnown RBP14.3□□□□□ -0.12
CDX1-202ENST00000616154 COMMD5Q9GZQ3 224 aa14.3□□□□□ -0.12
CDX1-202ENST00000616154 HIPK2Q9H2X6 1198 aa14.3□□□□□ -0.12
CDX1-202ENST00000616154 RETNQ9HD89 108 aa14.3□□□□□ -0.12
CDX1-202ENST00000616154 SHPKQ9UHJ6 478 aa14.3□□□□□ -0.12
CDX1-202ENST00000616154 ZNF785A8K8V0 405 aa14.29□□□□□ -0.12
CDX1-202ENST00000616154 ANXA3P12429 323 aa14.29□□□□□ -0.12
CDX1-202ENST00000616154 VAMP1P23763 118 aa14.29□□□□□ -0.12
CDX1-202ENST00000616154 LPAR6P43657 344 aa14.29□□□□□ -0.12
CDX1-202ENST00000616154 SRPXP78539 464 aa14.29□□□□□ -0.12
CDX1-202ENST00000616154 ANKRD55Q3KP44 614 aa14.29□□□□□ -0.12
CDX1-202ENST00000616154 OR52B4Q8NGK2 314 aa14.29□□□□□ -0.12
CDX1-202ENST00000616154 DYNLRB2Q8TF09 96 aa14.29□□□□□ -0.12
CDX1-202ENST00000616154 CCDC140Q96MF4 163 aa14.29□□□□□ -0.12
CDX1-202ENST00000616154 SEC22CQ9BRL7 303 aa14.29□□□□□ -0.12
CDX1-202ENST00000616154 FBXL7Q9UJT9 491 aa14.29□□□□□ -0.12
CDX1-202ENST00000616154 HYDINQ4G0P3 5121 aa14.29□□□□□ -0.12
CDX1-202ENST00000616154 NDUFB8O95169 186 aa14.28□□□□□ -0.12
CDX1-202ENST00000616154 SERPINE2P07093 398 aa14.28□□□□□ -0.12
CDX1-202ENST00000616154 DEFB114Q30KQ6 69 aa14.28□□□□□ -0.12
CDX1-202ENST00000616154 IL17DQ8TAD2 202 aa14.28□□□□□ -0.12
CDX1-202ENST00000616154 GPN1Q9HCN4 374 aaPredicted RBP14.28□□□□□ -0.12
CDX1-202ENST00000616154 ZC4H2Q9NQZ6 224 aa14.28□□□□□ -0.12
CDX1-202ENST00000616154 NDUFA4L2Q9NRX3 87 aa14.28□□□□□ -0.12
CDX1-202ENST00000616154 C2orf70A6NJV1 201 aa14.27□□□□□ -0.12
CDX1-202ENST00000616154 DBX1A6NMT0 343 aa14.27□□□□□ -0.12
CDX1-202ENST00000616154 PPP5D1E7EU14 171 aa14.27□□□□□ -0.12
CDX1-202ENST00000616154 CD7P09564 240 aa14.27□□□□□ -0.12
CDX1-202ENST00000616154 P0C879 139 aa14.27□□□□□ -0.12
CDX1-202ENST00000616154 SELENOHQ8IZQ5 122 aaKnown RBP14.27□□□□□ -0.12
CDX1-202ENST00000616154 OR1L8Q8NGR8 309 aa14.27□□□□□ -0.12
CDX1-202ENST00000616154 RBPMSQ93062 196 aaKnown RBP14.27□□□□□ -0.12
CDX1-202ENST00000616154 SEC22AQ96IW7 307 aa14.27□□□□□ -0.12
CDX1-202ENST00000616154 FAM110AQ9BQ89 295 aa14.27□□□□□ -0.12
CDX1-202ENST00000616154 TECRQ9NZ01 308 aaKnown RBP14.27□□□□□ -0.12
CDX1-202ENST00000616154 PLECQ15149 4684 aaKnown RBP14.27□□□□□ -0.13
CDX1-202ENST00000616154 PIGBOS1A0A0B4J2F0 54 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 TEX50A0A1B0GTY4 177 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 DUXBA0A1W2PPF3 345 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 RBMY1BA6NDE4 496 aaKnown RBP14.26□□□□□ -0.13
CDX1-202ENST00000616154 RBMY1EA6NEQ0 496 aaKnown RBP14.26□□□□□ -0.13
CDX1-202ENST00000616154 LGALS9O00182 355 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 GGCTO75223 188 aaKnown RBP14.26□□□□□ -0.13
CDX1-202ENST00000616154 KRASP01116 189 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 RBMY1DP0C7P1 496 aaKnown RBP14.26□□□□□ -0.13
CDX1-202ENST00000616154 FOLR2P14207 255 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 G6PCP35575 357 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 WT1-ASQ06250 92 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 GPHB5Q86YW7 130 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 LGI3Q8N145 548 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 DEFB125Q8N687 156 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 OR5B3Q8NH48 314 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 CXorf58Q96LI9 332 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 TMEM14BQ9NUH8 114 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 PRNDQ9UKY0 176 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 ALG5Q9Y673 324 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 ALMS1Q8TCU4 4167 aa14.26□□□□□ -0.13
CDX1-202ENST00000616154 TRBV7-1A0A0A6YYK4 115 aa14.25□□□□□ -0.13
CDX1-202ENST00000616154 REG1AP05451 166 aa14.25□□□□□ -0.13
CDX1-202ENST00000616154 TRAPPC2P0DI81 140 aa14.25□□□□□ -0.13
CDX1-202ENST00000616154 TRAPPC2BP0DI82 140 aa14.25□□□□□ -0.13
CDX1-202ENST00000616154 EDN2P20800 178 aa14.25□□□□□ -0.13
CDX1-202ENST00000616154 COQ8AQ8NI60 647 aa14.25□□□□□ -0.13
CDX1-202ENST00000616154 EEF1AKMT3Q96AZ1 226 aa14.25□□□□□ -0.13
CDX1-202ENST00000616154 WFDC10AQ9H1F0 79 aa14.25□□□□□ -0.13
CDX1-202ENST00000616154 SRD5A3Q9H8P0 318 aa14.25□□□□□ -0.13
CDX1-202ENST00000616154 PRR13Q9NZ81 148 aa14.25□□□□□ -0.13
CDX1-202ENST00000616154 C15orf61A6NNL5 157 aa14.24□□□□□ -0.13
CDX1-202ENST00000616154 OR11H12B2RN74 326 aa14.24□□□□□ -0.13
CDX1-202ENST00000616154 JTBO76095 146 aa14.24□□□□□ -0.13
CDX1-202ENST00000616154 OR2C1O95371 312 aa14.24□□□□□ -0.13
CDX1-202ENST00000616154 IGKV1-5P01602 117 aa14.24□□□□□ -0.13
CDX1-202ENST00000616154 DEFA4P12838 97 aa14.24□□□□□ -0.13
CDX1-202ENST00000616154 GUCA2BQ16661 112 aa14.24□□□□□ -0.13
CDX1-202ENST00000616154 NMSQ5H8A3 153 aa14.24□□□□□ -0.13
CDX1-202ENST00000616154 TMEM268Q5VZI3 342 aa14.24□□□□□ -0.13
CDX1-202ENST00000616154 C12orf45Q8N5I9 185 aaPredicted RBP14.24□□□□□ -0.13
CDX1-202ENST00000616154 OR10W1Q8NGF6 305 aa14.24□□□□□ -0.13
CDX1-202ENST00000616154 ZNF502Q8TBZ5 544 aa14.24□□□□□ -0.13
CDX1-202ENST00000616154 LSM10Q969L4 123 aaKnown RBP14.24□□□□□ -0.13
CDX1-202ENST00000616154 ATP6V0BQ99437 205 aa14.24□□□□□ -0.13
CDX1-202ENST00000616154 FKBP11Q9NYL4 201 aa14.24□□□□□ -0.13
CDX1-202ENST00000616154 MFSD2BA6NFX1 497 aa14.23□□□□□ -0.13
CDX1-202ENST00000616154 A8MWP6 167 aa14.23□□□□□ -0.13
CDX1-202ENST00000616154 SNAPC5O75971 98 aa14.23□□□□□ -0.13
CDX1-202ENST00000616154 SLC35G3Q8N808 338 aa14.23□□□□□ -0.13
CDX1-202ENST00000616154 VN1R17PQ8TDU5 208 aa14.23□□□□□ -0.13
CDX1-202ENST00000616154 WDR89Q96FK6 387 aaPredicted RBP14.23□□□□□ -0.13
CDX1-202ENST00000616154 THYN1Q9P016 225 aa14.23□□□□□ -0.13
CDX1-202ENST00000616154 OR51B2Q9Y5P1 312 aa14.23□□□□□ -0.13
CDX1-202ENST00000616154 F11RQ9Y624 299 aaKnown RBP14.23□□□□□ -0.13
CDX1-202ENST00000616154 CYB5BO43169 146 aa14.22□□□□□ -0.13
CDX1-202ENST00000616154 ATG12O94817 140 aa14.22□□□□□ -0.13
CDX1-202ENST00000616154 OR13C7P0DN81 318 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms