RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 TM4SF20Q53R12 229 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 LDLRAD1Q5T700 205 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 FAM166AQ6J272 317 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 MUC21A0A0G2JKD1 596 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 MUC21A0A140T8X8 626 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 FAM231BA6NCW3 169 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 ATP5G1P05496 136 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 ATP5G3P48201 142 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 ATP5G2Q06055 141 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 MUC21Q5SSG8 566 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 EDA2RQ9HAV5 297 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 HCFC1R1Q9NWW0 138 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 RNF186Q9NXI6 227 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 GOLT1AQ6ZVE7 132 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 COQ2Q96H96 371 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 SLC25A39Q9BZJ4 359 aaPredicted RBP7.47□□□□□ -1.21
TTC28-208ENST00000612946 KIR2DL5BA0A0G2JN68 375 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 KIR2DL5BA0A0G2JPC4 375 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 MDP1Q86V88 176 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 KIR2DL5AQ8N109 375 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 RFESDQ8TAC1 157 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 WFDC5Q8TCV5 224 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 BADQ92934 168 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 IGHV2-70DA0A0C4DH43 119 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 GNB2P62879 340 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 C2orf82Q6UX34 121 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 ACYP1P07311 99 aa7.46□□□□□ -1.21
TTC28-208ENST00000612946 MFAP4P55083 255 aa7.46□□□□□ -1.21
TTC28-208ENST00000612946 PSG6Q00889 435 aa7.46□□□□□ -1.21
TTC28-208ENST00000612946 ZNF818PQ6ZRF7 136 aa7.46□□□□□ -1.21
TTC28-208ENST00000612946 MSGN1A6NI15 193 aa7.46□□□□□ -1.21
TTC28-208ENST00000612946 K7EQS6 105 aa7.46□□□□□ -1.21
TTC28-208ENST00000612946 PIN1P1O15428 100 aa7.46□□□□□ -1.21
TTC28-208ENST00000612946 MPV17L2Q567V2 206 aa7.46□□□□□ -1.21
TTC28-208ENST00000612946 IGLV1-36A0A0B4J1U3 117 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 CFPP27918 469 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 SPATA46Q5T0L3 261 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 FAM90A1Q86YD7 464 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 ST6GALNAC3Q8NDV1 305 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 PHLDA1Q8WV24 401 aaPredicted RBP7.46□□□□□ -1.22
TTC28-208ENST00000612946 H3BMM0 161 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 UBE2WQ96B02 151 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 SCO2A0A1W2PP80 73 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 PRRT4C9JH25 899 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 NTN1O95631 604 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 AZU1P20160 251 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 GUSBP1Q15486 140 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 ZNF815PA8K554 130 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 SRSF3P84103 164 aaKnown RBP7.46□□□□□ -1.22
TTC28-208ENST00000612946 OSR1Q8TAX0 266 aaPredicted RBP7.46□□□□□ -1.22
TTC28-208ENST00000612946 RNF7Q9UBF6 113 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 SORL1Q92673 2214 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 SMAD7O15105 426 aaKnown RBP7.46□□□□□ -1.22
TTC28-208ENST00000612946 KRTCAP3Q53RY4 240 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 SPXQ9BT56 116 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 PGPEP1Q9NXJ5 209 aa7.46□□□□□ -1.22
TTC28-208ENST00000612946 VN1R4Q7Z5H5 301 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 LINC01551Q86U37 167 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 POLR3KQ9Y2Y1 108 aaPredicted RBP7.45□□□□□ -1.22
TTC28-208ENST00000612946 TRBV7-9A0A0J9YWB2 115 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 GAGE2AQ6NT46 116 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 C16orf92Q96LL3 132 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 KCNK17Q96T54 332 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 C1QTNF4Q9BXJ3 329 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 NRXN2Q9P2S2 1712 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 LAMTOR3Q9UHA4 124 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 SUMO2P61956 95 aaKnown RBP7.45□□□□□ -1.22
TTC28-208ENST00000612946 TMSB15BA0A087X1C1 80 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 IGHV2OR16-5A0A0B4J2B6 119 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 NPIPB11E5RHQ5 1161 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 IFI27P40305 119 aaPredicted RBP7.45□□□□□ -1.22
TTC28-208ENST00000612946 C17orf99Q6UX52 265 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 C9orf40Q8IXQ3 194 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 INSIG2Q9Y5U4 225 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 PAPPA2Q9BXP8 1791 aa7.45□□□□□ -1.22
TTC28-208ENST00000612946 FNDC10F2Z333 226 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 SELLP14151 372 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 FOXA3P55318 350 aaPredicted RBP7.44□□□□□ -1.22
TTC28-208ENST00000612946 UNC119Q13432 240 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 TMEM155Q4W5P6 130 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 ASPHD2Q6ICH7 369 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 NBEAP1P0C6P0 100 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 LINC00305Q7Z4B0 112 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 TMPRSS2O15393 492 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 NPSP0C0P6 89 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 TCTEX1D4Q5JR98 221 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 C12orf76Q8N812 135 aaPredicted RBP7.44□□□□□ -1.22
TTC28-208ENST00000612946 IGHV2-26A0A0B4J1V2 119 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 F2RL2O00254 374 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 MOSP00540 346 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 IGHV3-43A0A0B4J1X8 118 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 A0A1W2PPM0 123 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 TM4SF5O14894 197 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 IGHV4-39P01824 125 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 IGHV3-43DP0DP04 118 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 OR11H6Q8NGC7 330 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 SPANXB1Q9NS25 103 aaPredicted RBP7.44□□□□□ -1.22
TTC28-208ENST00000612946 LINC01555Q8NAE3 123 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 R4GN57 208 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 MALRD1Q5VYJ5 2156 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms