RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 C22orf24Q9Y442 160 aa0.83□□□□□ -2.28
RNU6-88P-201ENST00000606801 EML5Q05BV3 1969 aa0.83□□□□□ -2.28
RNU6-88P-201ENST00000606801 HLA-DRB1P01911 266 aa0.82□□□□□ -2.28
RNU6-88P-201ENST00000606801 CRYGAP11844 174 aa0.82□□□□□ -2.28
RNU6-88P-201ENST00000606801 RPL5P46777 297 aaKnown RBP0.82□□□□□ -2.28
RNU6-88P-201ENST00000606801 RPS20P60866 119 aaKnown RBP0.82□□□□□ -2.28
RNU6-88P-201ENST00000606801 SPCS3P61009 180 aa0.82□□□□□ -2.28
RNU6-88P-201ENST00000606801 HBA1P69905 142 aa0.82□□□□□ -2.28
RNU6-88P-201ENST00000606801 HIST2H3PS2Q5TEC6 136 aa0.82□□□□□ -2.28
RNU6-88P-201ENST00000606801 RPL22L1Q6P5R6 122 aaKnown RBP0.82□□□□□ -2.28
RNU6-88P-201ENST00000606801 OR13C4Q8NGS5 318 aa0.82□□□□□ -2.28
RNU6-88P-201ENST00000606801 TERB2Q8NHR7 220 aa0.82□□□□□ -2.28
RNU6-88P-201ENST00000606801 MRPS26Q9BYN8 205 aaKnown RBP0.82□□□□□ -2.28
RNU6-88P-201ENST00000606801 MYH10P35580 1976 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 BUB1B-PAK6H3BSN5 160 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 CHP2O43745 196 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 AHSA1O95433 338 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 TNNC2P02585 160 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 STX5Q13190 355 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 KCNJ8Q15842 424 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 IMPG1Q17R60 797 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 SPANXN3Q5MJ09 141 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 AAED1Q7RTV5 226 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 IQCF2Q8IXL9 164 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 AQP3Q92482 292 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 TMEM106AQ96A25 262 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 ODF3Q96PU9 254 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 TSPAN32Q96QS1 320 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 NIPSNAP1Q9BPW8 284 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 NUP155O75694 1391 aa0.81□□□□□ -2.28
RNU6-88P-201ENST00000606801 SNRNP200O75643 2136 aaKnown RBP0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 NEO1Q92859 1461 aa0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 C19orf84I3L1E1 186 aa0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 NIPSNAP2O75323 286 aa0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 SPI1P17947 270 aa0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 DEFA1P59665 94 aa0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 UBE2IP63279 158 aaKnown RBP0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 ACOT6Q3I5F7 207 aaPredicted RBP0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 KRTAP5-10Q6L8G5 202 aa0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 BPIFA4PQ86YQ2 179 aa0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 CLVS1Q8IUQ0 354 aaPredicted RBP0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 WFDC11Q8NEX6 87 aa0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 H1FXQ92522 213 aaKnown RBP0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 IMP4Q96G21 291 aaKnown RBP0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 SCGB3A1Q96QR1 104 aa0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 PRTFDC1Q9NRG1 225 aa0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 MRPL27Q9P0M9 148 aaKnown RBP0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 CKLFQ9UBR5 152 aa0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 HEATR1Q9H583 2144 aaKnown RBP0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 ROBO3Q96MS0 1386 aa0.8□□□□□ -2.28
RNU6-88P-201ENST00000606801 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 CASP8AP2Q9UKL3 1982 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 LAMB4A4D0S4 1761 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 TRAV14DV4A0A0A6YYC5 116 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 EXOC1LA0A1B0GW35 172 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 DPRXA6NFQ7 191 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 PSMD12O00232 456 aaPredicted RBP0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 FADS1O60427 444 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 IFNA16P05015 189 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 HTR1AP08908 422 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 ASAH2BP0C7U1 165 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 CD79AP11912 226 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 IL9P15248 144 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 TEX36Q5VZQ5 186 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 C20orf196Q8IYI0 205 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 OR52R1Q8NGF1 315 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 MCFD2Q8NI22 146 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 TOMM6Q96B49 74 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 OR52E6Q96RD3 313 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 SERPINI1Q99574 410 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 SLC50A1Q9BRV3 221 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 PLXNA4Q9HCM2 1894 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 ADCY9O60503 1353 aa0.79□□□□□ -2.28
RNU6-88P-201ENST00000606801 OBSL1O75147 1896 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 FAM236DA0A1B0GTK5 79 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 C2orf70A6NJV1 201 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 OR2T1O43869 369 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 OR2J2O76002 312 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 OR5F1O95221 314 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 FAM236CP0DP71 79 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 SULT1A1P50225 295 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 CDC42P60953 191 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 PSME3P61289 254 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 LPCAT3Q6P1A2 487 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 MIR17HGQ75NE6 70 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 DEFB128Q7Z7B8 93 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 ANKRD29Q8N6D5 301 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 C12orf29Q8N999 325 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 OR4C6Q8NH72 309 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 TRABDQ9H4I3 376 aa0.78□□□□□ -2.28
RNU6-88P-201ENST00000606801 ZNF469Q96JG9 3925 aaPredicted RBP0.78□□□□□ -2.29
RNU6-88P-201ENST00000606801 LAMA4Q16363 1823 aa0.78□□□□□ -2.29
RNU6-88P-201ENST00000606801 SCN8AQ9UQD0 1980 aa0.77□□□□□ -2.29
RNU6-88P-201ENST00000606801 IGKV2D-26A0A0A0MRZ7 120 aa0.77□□□□□ -2.29
RNU6-88P-201ENST00000606801 TRAV1-1A0A0B4J248 108 aa0.77□□□□□ -2.29
RNU6-88P-201ENST00000606801 CLDN24A6NM45 220 aa0.77□□□□□ -2.29
RNU6-88P-201ENST00000606801 GEMIN2O14893 280 aaKnown RBP0.77□□□□□ -2.29
RNU6-88P-201ENST00000606801 LYPLA2O95372 231 aa0.77□□□□□ -2.29
RNU6-88P-201ENST00000606801 CLDN22Q8N7P3 220 aa0.77□□□□□ -2.29
RNU6-88P-201ENST00000606801 OR4D11Q8NGI4 311 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms