RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 RNASE2P10153 161 aaKnown RBP10.68□□□□□ -0.7
RNF40-212ENST00000602784 ATP5IP56385 69 aaPredicted RBP10.68□□□□□ -0.7
RNF40-212ENST00000602784 C12orf45Q8N5I9 185 aaPredicted RBP10.68□□□□□ -0.7
RNF40-212ENST00000602784 ZNF502Q8TBZ5 544 aa10.68□□□□□ -0.7
RNF40-212ENST00000602784 MCRIP2Q9BUT9 160 aaKnown RBP10.68□□□□□ -0.7
RNF40-212ENST00000602784 GPN1Q9HCN4 374 aaPredicted RBP10.68□□□□□ -0.7
RNF40-212ENST00000602784 NOTCH1P46531 2555 aa10.68□□□□□ -0.7
RNF40-212ENST00000602784 MFSD2BA6NFX1 497 aa10.67□□□□□ -0.7
RNF40-212ENST00000602784 SNRPGP15A8MWD9 76 aa10.67□□□□□ -0.7
RNF40-212ENST00000602784 I3L2K1 104 aa10.67□□□□□ -0.7
RNF40-212ENST00000602784 K7EIM0 57 aa10.67□□□□□ -0.7
RNF40-212ENST00000602784 MED6O75586 246 aa10.67□□□□□ -0.7
RNF40-212ENST00000602784 LY86O95711 162 aa10.67□□□□□ -0.7
RNF40-212ENST00000602784 TRBV12-3P01733 135 aa10.67□□□□□ -0.7
RNF40-212ENST00000602784 HOXD3P31249 432 aaPredicted RBP10.67□□□□□ -0.7
RNF40-212ENST00000602784 KLF5Q13887 457 aaPredicted RBP10.67□□□□□ -0.7
RNF40-212ENST00000602784 C2orf83Q53S99 150 aa10.67□□□□□ -0.7
RNF40-212ENST00000602784 NOXA1Q86UR1 476 aa10.67□□□□□ -0.7
RNF40-212ENST00000602784 DTD1Q8TEA8 209 aa10.67□□□□□ -0.7
RNF40-212ENST00000602784 SCARB1Q8WTV0 552 aa10.67□□□□□ -0.7
RNF40-212ENST00000602784 CCDC140Q96MF4 163 aa10.67□□□□□ -0.7
RNF40-212ENST00000602784 RBKSQ9H477 322 aa10.67□□□□□ -0.7
RNF40-212ENST00000602784 U3KQ87 197 aa10.67□□□□□ -0.7
RNF40-212ENST00000602784 BMPR1BO00238 502 aa10.66□□□□□ -0.7
RNF40-212ENST00000602784 GGCTO75223 188 aaKnown RBP10.66□□□□□ -0.7
RNF40-212ENST00000602784 CLEC3BP05452 202 aa10.66□□□□□ -0.7
RNF40-212ENST00000602784 FCGR2BP31994 310 aaPredicted RBP10.66□□□□□ -0.7
RNF40-212ENST00000602784 ID3Q02535 119 aa10.66□□□□□ -0.7
RNF40-212ENST00000602784 DCTN2Q13561 401 aaKnown RBP10.66□□□□□ -0.7
RNF40-212ENST00000602784 DCUN1D4Q92564 292 aa10.66□□□□□ -0.7
RNF40-212ENST00000602784 DLX4Q92988 240 aaPredicted RBP10.66□□□□□ -0.7
RNF40-212ENST00000602784 MISP3Q96FF7 219 aa10.66□□□□□ -0.7
RNF40-212ENST00000602784 TXN2Q99757 166 aa10.66□□□□□ -0.7
RNF40-212ENST00000602784 GPR61Q9BZJ8 451 aa10.66□□□□□ -0.7
RNF40-212ENST00000602784 GAR1Q9NY12 217 aaKnown RBP10.66□□□□□ -0.7
RNF40-212ENST00000602784 C21orf62Q9NYP8 219 aa10.66□□□□□ -0.7
RNF40-212ENST00000602784 MPTX1A8MV57 137 aa10.65□□□□□ -0.7
RNF40-212ENST00000602784 OVOL1O14753 267 aa10.65□□□□□ -0.7
RNF40-212ENST00000602784 WIPF1O43516 503 aa10.65□□□□□ -0.7
RNF40-212ENST00000602784 SYNGR2O43760 224 aa10.65□□□□□ -0.7
RNF40-212ENST00000602784 NXPH3O95157 252 aa10.65□□□□□ -0.7
RNF40-212ENST00000602784 MT-CO2P00403 227 aa10.65□□□□□ -0.7
RNF40-212ENST00000602784 SLURP1P55000 103 aa10.65□□□□□ -0.7
RNF40-212ENST00000602784 TATDN3Q17R31 274 aa10.65□□□□□ -0.7
RNF40-212ENST00000602784 RPEL1Q2QD12 228 aa10.65□□□□□ -0.7
RNF40-212ENST00000602784 IAH1Q2TAA2 248 aaPredicted RBP10.65□□□□□ -0.7
RNF40-212ENST00000602784 CLEC19AQ6UXS0 136 aa10.65□□□□□ -0.7
RNF40-212ENST00000602784 SLC24A4Q8NFF2 622 aa10.65□□□□□ -0.7
RNF40-212ENST00000602784 OR4D5Q8NGN0 318 aa10.65□□□□□ -0.7
RNF40-212ENST00000602784 RNASEH2CQ8TDP1 164 aaKnown RBP10.65□□□□□ -0.7
RNF40-212ENST00000602784 OR10C1Q96KK4 312 aa10.65□□□□□ -0.7
RNF40-212ENST00000602784 CIB3Q96Q77 187 aaPredicted RBP10.65□□□□□ -0.7
RNF40-212ENST00000602784 CMYA5Q8N3K9 4069 aa10.64□□□□□ -0.71
RNF40-212ENST00000602784 IGHV3-23P01764 117 aa10.64□□□□□ -0.71
RNF40-212ENST00000602784 NPY1RP25929 384 aa10.64□□□□□ -0.71
RNF40-212ENST00000602784 ARL3P36405 182 aa10.64□□□□□ -0.71
RNF40-212ENST00000602784 NKX2-1P43699 371 aaPredicted RBP10.64□□□□□ -0.71
RNF40-212ENST00000602784 MFAP4P55083 255 aa10.64□□□□□ -0.71
RNF40-212ENST00000602784 SAMD5Q5TGI4 173 aa10.64□□□□□ -0.71
RNF40-212ENST00000602784 SPSB3Q6PJ21 355 aa10.64□□□□□ -0.71
RNF40-212ENST00000602784 GPHB5Q86YW7 130 aa10.64□□□□□ -0.71
RNF40-212ENST00000602784 ZBTB8BQ8NAP8 495 aaPredicted RBP10.64□□□□□ -0.71
RNF40-212ENST00000602784 UXS1Q8NBZ7 420 aa10.64□□□□□ -0.71
RNF40-212ENST00000602784 BSCL2Q96G97 398 aaPredicted RBP10.64□□□□□ -0.71
RNF40-212ENST00000602784 S4R3C0 116 aa10.64□□□□□ -0.71
RNF40-212ENST00000602784 PPP5D1E7EU14 171 aa10.63□□□□□ -0.71
RNF40-212ENST00000602784 F8W735 103 aaPredicted RBP10.63□□□□□ -0.71
RNF40-212ENST00000602784 IFNA10P01566 189 aa10.63□□□□□ -0.71
RNF40-212ENST00000602784 IGLL1P15814 213 aa10.63□□□□□ -0.71
RNF40-212ENST00000602784 SPNP16150 400 aa10.63□□□□□ -0.71
RNF40-212ENST00000602784 GPR183P32249 361 aa10.63□□□□□ -0.71
RNF40-212ENST00000602784 INSL3P51460 131 aa10.63□□□□□ -0.71
RNF40-212ENST00000602784 RPP30P78346 268 aaKnown RBP10.63□□□□□ -0.71
RNF40-212ENST00000602784 OXLD1Q5BKU9 147 aa10.63□□□□□ -0.71
RNF40-212ENST00000602784 C1QL4Q86Z23 238 aa10.63□□□□□ -0.71
RNF40-212ENST00000602784 TMEM170AQ8WVE7 144 aa10.63□□□□□ -0.71
RNF40-212ENST00000602784 IGHV3-21A0A0B4J1V1 117 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 RPS10-NUDT3A0A1W2PQS6 291 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 C5orf51A6NDU8 294 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 SEC14L6B5MCN3 397 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 LGALS9O00182 355 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 TGOLN2O43493 480 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 OR2C1O95371 312 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 NPBWR1P48145 328 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 SYNJ2BPP57105 145 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 FAM106AQ4KMX7 169 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 KPRPQ5T749 579 aaPredicted RBP10.62□□□□□ -0.71
RNF40-212ENST00000602784 C9orf66Q5T8R8 295 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 ACSM6Q6P461 480 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 GSG1LQ6UXU4 331 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 PINX1Q96BK5 328 aaKnown RBP10.62□□□□□ -0.71
RNF40-212ENST00000602784 C2orf50Q96LR7 162 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 ELOVL1Q9BW60 279 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 MAGT1Q9H0U3 335 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 FNDC4Q9H6D8 234 aaPredicted RBP10.62□□□□□ -0.71
RNF40-212ENST00000602784 GSKIPQ9P0R6 139 aa10.62□□□□□ -0.71
RNF40-212ENST00000602784 C7orf66A4D0T2 115 aa10.61□□□□□ -0.71
RNF40-212ENST00000602784 OR2T8A6NH00 312 aa10.61□□□□□ -0.71
RNF40-212ENST00000602784 FAM25EA8MYX2 175 aa10.61□□□□□ -0.71
RNF40-212ENST00000602784 G3V4G9 280 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms