RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 TNRC6AQ8NDV7 1962 aaKnown RBP8.72□□□□□ -1.01
LIG1-220ENST00000601091 EP300Q09472 2414 aaPredicted RBP8.72□□□□□ -1.01
LIG1-220ENST00000601091 DOCK10Q96BY6 2186 aa8.72□□□□□ -1.01
LIG1-220ENST00000601091 FOXH1O75593 365 aa8.72□□□□□ -1.01
LIG1-220ENST00000601091 RHOBP62745 196 aa8.72□□□□□ -1.01
LIG1-220ENST00000601091 Q0VFX4 171 aa8.72□□□□□ -1.01
LIG1-220ENST00000601091 TRIP6Q15654 476 aaKnown RBP8.72□□□□□ -1.01
LIG1-220ENST00000601091 OR4A5Q8NH83 315 aa8.72□□□□□ -1.01
LIG1-220ENST00000601091 GP6Q9HCN6 339 aa8.72□□□□□ -1.01
LIG1-220ENST00000601091 KIAA1324LA8MWY0 1029 aaPredicted RBP8.71□□□□□ -1.01
LIG1-220ENST00000601091 FCN3O75636 299 aa8.71□□□□□ -1.01
LIG1-220ENST00000601091 CLDN14O95500 239 aa8.71□□□□□ -1.01
LIG1-220ENST00000601091 GYPAP02724 150 aa8.71□□□□□ -1.01
LIG1-220ENST00000601091 KIR2DS2P43631 304 aa8.71□□□□□ -1.01
LIG1-220ENST00000601091 ZNF324BQ6AW86 544 aaPredicted RBP8.71□□□□□ -1.01
LIG1-220ENST00000601091 Q6ZS49 121 aa8.71□□□□□ -1.01
LIG1-220ENST00000601091 ZNF525Q8N782 197 aa8.71□□□□□ -1.01
LIG1-220ENST00000601091 RBMXL3Q8N7X1 1067 aaKnown RBP8.71□□□□□ -1.01
LIG1-220ENST00000601091 C3orf56Q8N813 242 aa8.71□□□□□ -1.01
LIG1-220ENST00000601091 TMEM171Q8WVE6 324 aa8.71□□□□□ -1.01
LIG1-220ENST00000601091 PRDM6Q9NQX0 595 aa8.71□□□□□ -1.01
LIG1-220ENST00000601091 FER1L5A0AVI2 2057 aa8.71□□□□□ -1.01
LIG1-220ENST00000601091 H1FXQ92522 213 aaKnown RBP8.71□□□□□ -1.01
LIG1-220ENST00000601091 HSPB9Q9BQS6 159 aa8.71□□□□□ -1.01
LIG1-220ENST00000601091 FUT9Q9Y231 359 aa8.71□□□□□ -1.01
LIG1-220ENST00000601091 ZG16O60844 167 aa8.71□□□□□ -1.02
LIG1-220ENST00000601091 ERHP84090 104 aaKnown RBP8.71□□□□□ -1.02
LIG1-220ENST00000601091 OR4X1Q8NH49 305 aa8.71□□□□□ -1.02
LIG1-220ENST00000601091 ZNF418Q8TF45 676 aaPredicted RBP8.71□□□□□ -1.02
LIG1-220ENST00000601091 DYNLRB1Q9NP97 96 aa8.71□□□□□ -1.02
LIG1-220ENST00000601091 ERG28Q9UKR5 140 aa8.71□□□□□ -1.02
LIG1-220ENST00000601091 IGHV1-69-2A0A0G2JMI3 117 aa8.71□□□□□ -1.02
LIG1-220ENST00000601091 TEX48A0A1B0GUV7 120 aa8.71□□□□□ -1.02
LIG1-220ENST00000601091 A0A1W2PRE2 83 aa8.71□□□□□ -1.02
LIG1-220ENST00000601091 TMEM250H0YL14 139 aa8.71□□□□□ -1.02
LIG1-220ENST00000601091 SUB1P53999 127 aaKnown RBP eCLIP8.71□□□□□ -1.021e-16■■■■■ 45.6
LIG1-220ENST00000601091 FAM3BP58499 235 aaPredicted RBP8.71□□□□□ -1.02
LIG1-220ENST00000601091 RHOGP84095 191 aa8.71□□□□□ -1.02
LIG1-220ENST00000601091 ACSM6Q6P461 480 aa8.71□□□□□ -1.02
LIG1-220ENST00000601091 ZNF883P0CG24 379 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 SLC35E4Q6ICL7 350 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 PLPPR1Q8TBJ4 325 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 PARLQ9H300 379 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 NRN1Q9NPD7 142 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 ABCA1O95477 2261 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 POLEQ07864 2286 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 C12orf77C9JDV5 145 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 KBTBD11O94819 623 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 DKK1O94907 266 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 NUDT3O95989 172 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 NTF4P34130 210 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 REG1BP48304 166 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 TPPP2P59282 170 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 SSMEM1Q8WWF3 244 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 ADTRPQ96IZ2 230 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 RCHY1Q96PM5 261 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 RETNQ9HD89 108 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 TIMM9Q9Y5J7 89 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 CENPVL3A0A0U1RRI6 287 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 J3QLI3 93 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 WIPF1O43516 503 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 MPDU1O75352 247 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 POU2AF1Q16633 256 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 RASL11AQ6T310 242 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 ZNF841Q6ZN19 808 aa8.7□□□□□ -1.02
LIG1-220ENST00000601091 DIRC3C9JPN6 131 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 ISLRO14498 428 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 MGST3O14880 152 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 IER3P46695 156 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 PSG7Q13046 419 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 MORN2Q502X0 79 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 TTC32Q5I0X7 151 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 C1orf174Q8IYL3 243 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 OR10G8Q8NGN5 311 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 A0A0G2JLM5 398 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 WNT9BO14905 357 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 PLGLAQ15195 96 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 TEX29Q8N6K0 151 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 CMTM2Q8TAZ6 248 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 SDF2L1Q9HCN8 221 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 ZNF331Q9NQX6 463 aaPredicted RBP8.69□□□□□ -1.02
LIG1-220ENST00000601091 CYSLTR1Q9Y271 337 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 GNG4P50150 75 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 ZNF497Q6ZNH5 498 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 ATOH7Q8N100 152 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 OR1L8Q8NGR8 309 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 MAP1LC3AQ9H492 121 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 CDC42EP3Q9UKI2 254 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 FREM2Q5SZK8 3169 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 TMEM131Q92545 1883 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 SPTA1P02549 2419 aa8.69□□□□□ -1.02
LIG1-220ENST00000601091 NDUFB4O95168 129 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 CXorf1O96002 111 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 MPV17P39210 176 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 MEF2CQ06413 473 aaPredicted RBP8.68□□□□□ -1.02
LIG1-220ENST00000601091 Q6ZT83 130 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 NPVFQ9HCQ7 196 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 TRAV1-1A0A0B4J248 108 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 C1QTNF9BB2RNN3 333 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 C10orf142B7Z368 130 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms