RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 KLK9Q2XQG4 91 aa14.1□□□□□ -0.15
PNKP-213ENST00000599543 LINC00322Q6ZN03 302 aaPredicted RBP14.1□□□□□ -0.15
PNKP-213ENST00000599543 OR1L8Q8NGR8 309 aa14.1□□□□□ -0.15
PNKP-213ENST00000599543 KLK9Q9UKQ9 250 aa14.1□□□□□ -0.15
PNKP-213ENST00000599543 PRNDQ9UKY0 176 aa14.1□□□□□ -0.15
PNKP-213ENST00000599543 TMEM213A2RRL7 107 aa14.09□□□□□ -0.15
PNKP-213ENST00000599543 CDS2O95674 445 aa14.09□□□□□ -0.15
PNKP-213ENST00000599543 CLEC3BP05452 202 aa14.09□□□□□ -0.15
PNKP-213ENST00000599543 P0C879 139 aa14.09□□□□□ -0.15
PNKP-213ENST00000599543 OR13C7P0DN81 318 aa14.09□□□□□ -0.15
PNKP-213ENST00000599543 VAMP1P23763 118 aa14.09□□□□□ -0.15
PNKP-213ENST00000599543 WT1-ASQ06250 92 aa14.09□□□□□ -0.15
PNKP-213ENST00000599543 Q6ZRM9 215 aa14.09□□□□□ -0.15
PNKP-213ENST00000599543 S100ZQ8WXG8 99 aa14.09□□□□□ -0.15
PNKP-213ENST00000599543 FAM110AQ9BQ89 295 aa14.09□□□□□ -0.15
PNKP-213ENST00000599543 NDUFA4L2Q9NRX3 87 aa14.09□□□□□ -0.15
PNKP-213ENST00000599543 TMEM14BQ9NUH8 114 aa14.09□□□□□ -0.15
PNKP-213ENST00000599543 THYN1Q9P016 225 aa14.09□□□□□ -0.15
PNKP-213ENST00000599543 SELENOKQ9Y6D0 94 aa14.09□□□□□ -0.15
PNKP-213ENST00000599543 A0A0B4J293 547 aa14.08□□□□□ -0.16
PNKP-213ENST00000599543 RBMY1BA6NDE4 496 aaKnown RBP14.08□□□□□ -0.16
PNKP-213ENST00000599543 RBMY1EA6NEQ0 496 aaKnown RBP14.08□□□□□ -0.16
PNKP-213ENST00000599543 NXPH3O95157 252 aa14.08□□□□□ -0.16
PNKP-213ENST00000599543 RBMY1DP0C7P1 496 aaKnown RBP14.08□□□□□ -0.16
PNKP-213ENST00000599543 GPR183P32249 361 aa14.08□□□□□ -0.16
PNKP-213ENST00000599543 DHODHQ02127 395 aa14.08□□□□□ -0.16
PNKP-213ENST00000599543 RBMS2Q15434 407 aaKnown RBP14.08□□□□□ -0.16
PNKP-213ENST00000599543 TMEM61Q8N0U2 210 aa14.08□□□□□ -0.16
PNKP-213ENST00000599543 RBPMSQ93062 196 aaKnown RBP14.08□□□□□ -0.16
PNKP-213ENST00000599543 RRNAD1Q96FB5 475 aaKnown RBP14.08□□□□□ -0.16
PNKP-213ENST00000599543 TSC22D3Q99576 134 aa14.08□□□□□ -0.16
PNKP-213ENST00000599543 SLC25A21Q9BQT8 299 aaPredicted RBP14.08□□□□□ -0.16
PNKP-213ENST00000599543 SRSF8Q9BRL6 282 aaKnown RBP14.08□□□□□ -0.16
PNKP-213ENST00000599543 MLXQ9UH92 298 aa14.08□□□□□ -0.16
PNKP-213ENST00000599543 KCNIP3Q9Y2W7 256 aa14.08□□□□□ -0.16
PNKP-213ENST00000599543 NAP1L6A6NFF2 107 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 CENPXA8MT69 81 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 CYB5BO43169 146 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 ST8SIA3O43173 380 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 LYRM1O43325 122 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 NDUFB6O95139 128 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 FGF2P09038 288 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 PPP1R1AQ13522 171 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 ZNF846Q147U1 533 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 THOC7Q6I9Y2 204 aaKnown RBP14.07□□□□□ -0.16
PNKP-213ENST00000599543 CENPSQ8N2Z9 138 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 SLC35G3Q8N808 338 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 UXS1Q8NBZ7 420 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 IL17DQ8TAD2 202 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 DEDD2Q8WXF8 326 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 GPR146Q96CH1 333 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 CCDC32Q9BV29 185 aa14.07□□□□□ -0.16
PNKP-213ENST00000599543 B3GALNT1O75752 331 aa14.06□□□□□ -0.16
PNKP-213ENST00000599543 SCAF4O95104 1147 aaKnown RBP14.06□□□□□ -0.16
PNKP-213ENST00000599543 ANXA7P20073 488 aaKnown RBP14.06□□□□□ -0.16
PNKP-213ENST00000599543 ANKRD55Q3KP44 614 aa14.06□□□□□ -0.16
PNKP-213ENST00000599543 BTNL8Q6UX41 500 aa14.06□□□□□ -0.16
PNKP-213ENST00000599543 LINC00299Q6ZSB3 139 aa14.06□□□□□ -0.16
PNKP-213ENST00000599543 LYZL2Q7Z4W2 148 aa14.06□□□□□ -0.16
PNKP-213ENST00000599543 OR52B4Q8NGK2 314 aa14.06□□□□□ -0.16
PNKP-213ENST00000599543 ZNF502Q8TBZ5 544 aa14.06□□□□□ -0.16
PNKP-213ENST00000599543 GALNT14Q96FL9 552 aa14.06□□□□□ -0.16
PNKP-213ENST00000599543 TMEM56Q96MV1 263 aa14.06□□□□□ -0.16
PNKP-213ENST00000599543 TMEM56-RWDD3S4R434 201 aa14.06□□□□□ -0.16
PNKP-213ENST00000599543 IGHV3-21A0A0B4J1V1 117 aa14.05□□□□□ -0.16
PNKP-213ENST00000599543 ATG12O94817 140 aa14.05□□□□□ -0.16
PNKP-213ENST00000599543 MFAP2P55001 183 aa14.05□□□□□ -0.16
PNKP-213ENST00000599543 TM4SF20Q53R12 229 aa14.05□□□□□ -0.16
PNKP-213ENST00000599543 TMEM128Q5BJH2 165 aa14.05□□□□□ -0.16
PNKP-213ENST00000599543 PLET1Q6UQ28 207 aa14.05□□□□□ -0.16
PNKP-213ENST00000599543 UNQ9165/PRO28630Q6UXU0 137 aa14.05□□□□□ -0.16
PNKP-213ENST00000599543 HSD17B13Q7Z5P4 300 aaPredicted RBP14.05□□□□□ -0.16
PNKP-213ENST00000599543 CADM3Q8N126 398 aa14.05□□□□□ -0.16
PNKP-213ENST00000599543 OR5B3Q8NH48 314 aa14.05□□□□□ -0.16
PNKP-213ENST00000599543 LSM10Q969L4 123 aaKnown RBP14.05□□□□□ -0.16
PNKP-213ENST00000599543 MARC2Q969Z3 335 aa14.05□□□□□ -0.16
PNKP-213ENST00000599543 C7orf50Q9BRJ6 194 aaKnown RBP14.05□□□□□ -0.16
PNKP-213ENST00000599543 FKBP11Q9NYL4 201 aa14.05□□□□□ -0.16
PNKP-213ENST00000599543 CACNG5Q9UF02 275 aa14.05□□□□□ -0.16
PNKP-213ENST00000599543 TBC1D24Q9ULP9 559 aa14.05□□□□□ -0.16
PNKP-213ENST00000599543 DNAH1Q9P2D7 4330 aa14.04□□□□□ -0.16
PNKP-213ENST00000599543 IFNA17P01571 189 aa14.04□□□□□ -0.16
PNKP-213ENST00000599543 HSPE1P61604 102 aaKnown RBP14.04□□□□□ -0.16
PNKP-213ENST00000599543 IFITM3Q01628 133 aa14.04□□□□□ -0.16
PNKP-213ENST00000599543 SLC25A24Q6NUK1 477 aa14.04□□□□□ -0.16
PNKP-213ENST00000599543 RBPMS2Q6ZRY4 209 aaKnown RBP14.04□□□□□ -0.16
PNKP-213ENST00000599543 WDR12Q9GZL7 423 aaKnown RBP14.04□□□□□ -0.16
PNKP-213ENST00000599543 UFC1Q9Y3C8 167 aa14.04□□□□□ -0.16
PNKP-213ENST00000599543 IGHV3-35A0A0C4DH35 117 aa14.03□□□□□ -0.16
PNKP-213ENST00000599543 SFT2D2O95562 160 aa14.03□□□□□ -0.16
PNKP-213ENST00000599543 ANXA3P12429 323 aa14.03□□□□□ -0.16
PNKP-213ENST00000599543 PRCDQ00LT1 54 aa14.03□□□□□ -0.16
PNKP-213ENST00000599543 LGI3Q8N145 548 aa14.03□□□□□ -0.16
PNKP-213ENST00000599543 VN1R17PQ8TDU5 208 aa14.03□□□□□ -0.16
PNKP-213ENST00000599543 MRPL27Q9P0M9 148 aaKnown RBP14.03□□□□□ -0.16
PNKP-213ENST00000599543 TRAV6A0A075B6T7 132 aa14.02□□□□□ -0.17
PNKP-213ENST00000599543 TRAV25A0A0B4J276 109 aa14.02□□□□□ -0.17
PNKP-213ENST00000599543 TGOLN2O43493 480 aa14.02□□□□□ -0.17
PNKP-213ENST00000599543 UPK1BO75841 260 aa14.02□□□□□ -0.17
PNKP-213ENST00000599543 ELLP55199 621 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms