RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 WT1-ASQ06250 92 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 Q56UQ5 140 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 TMEM17Q86X19 198 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 UBAC2Q8NBM4 344 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 OR5B3Q8NH48 314 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 SCARB1Q8WTV0 552 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 PHLDA1Q8WV24 401 aaPredicted RBP12.58□□□□□ -0.4
PNKP-210ENST00000597965 HINT2Q9BX68 163 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 CSTL1Q9H114 145 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 IFT46Q9NQC8 304 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 NDUFA4L2Q9NRX3 87 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 PRNDQ9UKY0 176 aa12.58□□□□□ -0.4
PNKP-210ENST00000597965 IFNA4P05014 189 aa12.57□□□□□ -0.4
PNKP-210ENST00000597965 RPL35AP18077 110 aaKnown RBP12.57□□□□□ -0.4
PNKP-210ENST00000597965 ADMP35318 185 aa12.57□□□□□ -0.4
PNKP-210ENST00000597965 TCTAP57738 103 aa12.57□□□□□ -0.4
PNKP-210ENST00000597965 TAS2R20P59543 309 aa12.57□□□□□ -0.4
PNKP-210ENST00000597965 PAFAH1B2P68402 229 aa12.57□□□□□ -0.4
PNKP-210ENST00000597965 TMEM69Q5SWH9 247 aa12.57□□□□□ -0.4
PNKP-210ENST00000597965 C15orf40Q8WUR7 153 aa12.57□□□□□ -0.4
PNKP-210ENST00000597965 SMIM4Q8WVI0 70 aa12.57□□□□□ -0.4
PNKP-210ENST00000597965 AUNIPQ9H7T9 357 aa12.57□□□□□ -0.4
PNKP-210ENST00000597965 OR51B2Q9Y5P1 312 aa12.57□□□□□ -0.4
PNKP-210ENST00000597965 CTSDP07339 412 aaPredicted RBP12.56□□□□□ -0.4
PNKP-210ENST00000597965 PTHLHP12272 177 aa12.56□□□□□ -0.4
PNKP-210ENST00000597965 S100GP29377 79 aa12.56□□□□□ -0.4
PNKP-210ENST00000597965 GNRHRP30968 328 aa12.56□□□□□ -0.4
PNKP-210ENST00000597965 MRPS10P82664 201 aaKnown RBP12.56□□□□□ -0.4
PNKP-210ENST00000597965 DHRS11Q6UWP2 260 aa12.56□□□□□ -0.4
PNKP-210ENST00000597965 NRARPQ7Z6K4 114 aa12.56□□□□□ -0.4
PNKP-210ENST00000597965 TMEM116Q8NCL8 245 aa12.56□□□□□ -0.4
PNKP-210ENST00000597965 TXN2Q99757 166 aa12.56□□□□□ -0.4
PNKP-210ENST00000597965 RARRES2Q99969 163 aa12.56□□□□□ -0.4
PNKP-210ENST00000597965 SMPXQ9UHP9 88 aa12.56□□□□□ -0.4
PNKP-210ENST00000597965 GABARAPH6UMI1 98 aa12.55□□□□□ -0.4
PNKP-210ENST00000597965 KRASP01116 189 aa12.55□□□□□ -0.4
PNKP-210ENST00000597965 RLN1P04808 185 aa12.55□□□□□ -0.4
PNKP-210ENST00000597965 INPP1P49441 399 aa12.55□□□□□ -0.4
PNKP-210ENST00000597965 OR1P1Q8NH06 330 aa12.55□□□□□ -0.4
PNKP-210ENST00000597965 OR52I2Q8NH67 350 aa12.55□□□□□ -0.4
PNKP-210ENST00000597965 C11orf45Q8TAV5 145 aa12.55□□□□□ -0.4
PNKP-210ENST00000597965 CHRDL1Q9BU40 450 aa12.55□□□□□ -0.4
PNKP-210ENST00000597965 RHPN1-AS1Q9BWJ2 59 aa12.55□□□□□ -0.4
PNKP-210ENST00000597965 EHFQ9NZC4 300 aa12.55□□□□□ -0.4
PNKP-210ENST00000597965 TRAV14DV4A0A0A6YYC5 116 aa12.54□□□□□ -0.4
PNKP-210ENST00000597965 IGHV7-4-1A0A0J9YVY3 117 aa12.54□□□□□ -0.4
PNKP-210ENST00000597965 LYRM1O43325 122 aa12.54□□□□□ -0.4
PNKP-210ENST00000597965 YIF1AO95070 293 aa12.54□□□□□ -0.4
PNKP-210ENST00000597965 FCGR2BP31994 310 aaPredicted RBP12.54□□□□□ -0.4
PNKP-210ENST00000597965 TAS2R46P59540 309 aa12.54□□□□□ -0.4
PNKP-210ENST00000597965 RBMS2Q15434 407 aaKnown RBP12.54□□□□□ -0.4
PNKP-210ENST00000597965 RNASE12Q5GAN4 147 aaKnown RBP12.54□□□□□ -0.4
PNKP-210ENST00000597965 MZT2BQ6NZ67 158 aa12.54□□□□□ -0.4
PNKP-210ENST00000597965 RPP25LQ8N5L8 163 aaKnown RBP12.54□□□□□ -0.4
PNKP-210ENST00000597965 FCAMRQ8WWV6 532 aa12.54□□□□□ -0.4
PNKP-210ENST00000597965 MOB3AQ96BX8 217 aa12.54□□□□□ -0.4
PNKP-210ENST00000597965 OR10C1Q96KK4 312 aa12.54□□□□□ -0.4
PNKP-210ENST00000597965 RNF2Q99496 336 aa12.54□□□□□ -0.4
PNKP-210ENST00000597965 GINS3Q9BRX5 216 aa12.54□□□□□ -0.4
PNKP-210ENST00000597965 C11orf68Q9H3H3 251 aaKnown RBP12.54□□□□□ -0.4
PNKP-210ENST00000597965 K7EIM0 57 aa12.53□□□□□ -0.4
PNKP-210ENST00000597965 CHEK1O14757 476 aa12.53□□□□□ -0.4
PNKP-210ENST00000597965 PGLYRP1O75594 196 aaPredicted RBP12.53□□□□□ -0.4
PNKP-210ENST00000597965 CTSGP08311 255 aa12.53□□□□□ -0.4
PNKP-210ENST00000597965 LPAR6P43657 344 aa12.53□□□□□ -0.4
PNKP-210ENST00000597965 BCAP31P51572 246 aa12.53□□□□□ -0.4
PNKP-210ENST00000597965 MFAP4P55083 255 aa12.53□□□□□ -0.4
PNKP-210ENST00000597965 KLF9Q13886 244 aaPredicted RBP12.53□□□□□ -0.4
PNKP-210ENST00000597965 LPCAT3Q6P1A2 487 aa12.53□□□□□ -0.4
PNKP-210ENST00000597965 APRG1Q8IVJ8 170 aa12.53□□□□□ -0.4
PNKP-210ENST00000597965 DUSP18Q8NEJ0 188 aa12.53□□□□□ -0.4
PNKP-210ENST00000597965 ZNF2Q9BSG1 426 aaPredicted RBP12.53□□□□□ -0.4
PNKP-210ENST00000597965 FAM212BQ9NTI7 297 aaPredicted RBP12.53□□□□□ -0.4
PNKP-210ENST00000597965 FRAS1Q86XX4 4008 aa12.53□□□□□ -0.4
PNKP-210ENST00000597965 IGHV3OR16-8A0A075B7F1 116 aa12.52□□□□□ -0.41
PNKP-210ENST00000597965 IGHV3-21A0A0B4J1V1 117 aa12.52□□□□□ -0.41
PNKP-210ENST00000597965 F8W735 103 aaPredicted RBP12.52□□□□□ -0.41
PNKP-210ENST00000597965 GPR31O00270 319 aa12.52□□□□□ -0.41
PNKP-210ENST00000597965 ZNF207O43670 478 aaKnown RBP12.52□□□□□ -0.41
PNKP-210ENST00000597965 G6PCP35575 357 aa12.52□□□□□ -0.41
PNKP-210ENST00000597965 MFAP2P55001 183 aa12.52□□□□□ -0.41
PNKP-210ENST00000597965 TOMM5Q8N4H5 51 aa12.52□□□□□ -0.41
PNKP-210ENST00000597965 OR6F1Q8NGZ6 308 aa12.52□□□□□ -0.41
PNKP-210ENST00000597965 OR11H2Q8NH07 326 aa12.52□□□□□ -0.41
PNKP-210ENST00000597965 C7orf50Q9BRJ6 194 aaKnown RBP12.52□□□□□ -0.41
PNKP-210ENST00000597965 TMEM14BQ9NUH8 114 aa12.52□□□□□ -0.41
PNKP-210ENST00000597965 C15orf61A6NNL5 157 aa12.51□□□□□ -0.41
PNKP-210ENST00000597965 DFFBO76075 338 aa12.51□□□□□ -0.41
PNKP-210ENST00000597965 FCER2P06734 321 aa12.51□□□□□ -0.41
PNKP-210ENST00000597965 OR5H2Q8NGV7 314 aa12.51□□□□□ -0.41
PNKP-210ENST00000597965 C2CD4CQ8TF44 421 aa12.51□□□□□ -0.41
PNKP-210ENST00000597965 KLK11Q9UBX7 282 aa12.51□□□□□ -0.41
PNKP-210ENST00000597965 MTFP1Q9UDX5 166 aa12.51□□□□□ -0.41
PNKP-210ENST00000597965 NSG2Q9Y328 171 aa12.51□□□□□ -0.41
PNKP-210ENST00000597965 MEIS3P1A6NDR6 274 aa12.5□□□□□ -0.41
PNKP-210ENST00000597965 GNG7O60262 68 aa12.5□□□□□ -0.41
PNKP-210ENST00000597965 PRSS3P35030 304 aa12.5□□□□□ -0.41
PNKP-210ENST00000597965 TFPI2P48307 235 aa12.5□□□□□ -0.41
PNKP-210ENST00000597965 ZNF114Q8NC26 417 aa12.5□□□□□ -0.41
PNKP-210ENST00000597965 OR4A16Q8NH70 328 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms