RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 TGP01266 2768 aa15.1■□□□□ 0.01
SHKBP1-214ENST00000597396 IGHV3-21A0A0B4J1V1 117 aa15.1■□□□□ 0.01
SHKBP1-214ENST00000597396 PPP5D1E7EU14 171 aa15.1■□□□□ 0.01
SHKBP1-214ENST00000597396 BMPR1BO00238 502 aa15.1■□□□□ 0.01
SHKBP1-214ENST00000597396 ARL3P36405 182 aa15.1■□□□□ 0.01
SHKBP1-214ENST00000597396 TNFRSF9Q07011 255 aa15.1■□□□□ 0.01
SHKBP1-214ENST00000597396 TATDN3Q17R31 274 aa15.1■□□□□ 0.01
SHKBP1-214ENST00000597396 C9orf66Q5T8R8 295 aa15.1■□□□□ 0.01
SHKBP1-214ENST00000597396 GGNBP1Q5YKI7 109 aa15.1■□□□□ 0.01
SHKBP1-214ENST00000597396 OR52B4Q8NGK2 314 aa15.1■□□□□ 0.01
SHKBP1-214ENST00000597396 IFNA21P01568 189 aa15.09■□□□□ 0.01
SHKBP1-214ENST00000597396 RNASE2P10153 161 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-214ENST00000597396 SLC25A6P12236 298 aa15.09■□□□□ 0.01
SHKBP1-214ENST00000597396 BEAN1Q3B7T3 259 aa15.09■□□□□ 0.01
SHKBP1-214ENST00000597396 ZNF502Q8TBZ5 544 aa15.09■□□□□ 0.01
SHKBP1-214ENST00000597396 PINX1Q96BK5 328 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-214ENST00000597396 HIPK2Q9H2X6 1198 aa15.09■□□□□ 0.01
SHKBP1-214ENST00000597396 HSPB7Q9UBY9 170 aa15.09■□□□□ 0.01
SHKBP1-214ENST00000597396 K7EIM0 57 aa15.08■□□□□ 0
SHKBP1-214ENST00000597396 GGCTO75223 188 aaKnown RBP15.08■□□□□ 0
SHKBP1-214ENST00000597396 ADAP1O75689 374 aa15.08■□□□□ 0
SHKBP1-214ENST00000597396 GPR183P32249 361 aa15.08■□□□□ 0
SHKBP1-214ENST00000597396 SYNJ2BPP57105 145 aa15.08■□□□□ 0
SHKBP1-214ENST00000597396 SCARB1Q8WTV0 552 aa15.08■□□□□ 0
SHKBP1-214ENST00000597396 RBKSQ9H477 322 aa15.08■□□□□ 0
SHKBP1-214ENST00000597396 C21orf62Q9NYP8 219 aa15.08■□□□□ 0
SHKBP1-214ENST00000597396 CORTO00230 105 aa15.07■□□□□ 0
SHKBP1-214ENST00000597396 MT-CO2P00403 227 aa15.07■□□□□ 0
SHKBP1-214ENST00000597396 CLEC3BP05452 202 aa15.07■□□□□ 0
SHKBP1-214ENST00000597396 HTR2BP41595 481 aa15.07■□□□□ 0
SHKBP1-214ENST00000597396 KLF5Q13887 457 aaPredicted RBP15.07■□□□□ 0
SHKBP1-214ENST00000597396 UBAC2Q8NBM4 344 aa15.07■□□□□ 0
SHKBP1-214ENST00000597396 MITD1Q8WV92 249 aa15.07■□□□□ 0
SHKBP1-214ENST00000597396 SEC22CQ9BRL7 303 aa15.07■□□□□ 0
SHKBP1-214ENST00000597396 ELOVL1Q9BW60 279 aa15.07■□□□□ 0
SHKBP1-214ENST00000597396 PITX3O75364 302 aa15.06■□□□□ 0
SHKBP1-214ENST00000597396 SAP30O75446 220 aa15.06■□□□□ 0
SHKBP1-214ENST00000597396 OR2C1O95371 312 aa15.06■□□□□ 0
SHKBP1-214ENST00000597396 Q56UQ5 140 aa15.06■□□□□ 0
SHKBP1-214ENST00000597396 KPRPQ5T749 579 aaPredicted RBP15.06■□□□□ 0
SHKBP1-214ENST00000597396 PLET1Q6UQ28 207 aa15.06■□□□□ 0
SHKBP1-214ENST00000597396 NRARPQ7Z6K4 114 aa15.06■□□□□ 0
SHKBP1-214ENST00000597396 SLC24A4Q8NFF2 622 aa15.06■□□□□ 0
SHKBP1-214ENST00000597396 DTD1Q8TEA8 209 aa15.06■□□□□ 0
SHKBP1-214ENST00000597396 ZNF431Q8TF32 576 aaPredicted RBP15.06■□□□□ 0
SHKBP1-214ENST00000597396 OR4C12Q96R67 309 aa15.06■□□□□ 0
SHKBP1-214ENST00000597396 ZC4H2Q9NQZ6 224 aa15.06■□□□□ 0
SHKBP1-214ENST00000597396 FAM90A26D6RGX4 464 aa15.05■□□□□ -0
SHKBP1-214ENST00000597396 I3L2K1 104 aa15.05■□□□□ -0
SHKBP1-214ENST00000597396 MED6O75586 246 aa15.05■□□□□ -0
SHKBP1-214ENST00000597396 MFAP4P55083 255 aa15.05■□□□□ -0
SHKBP1-214ENST00000597396 BSXQ3C1V8 233 aa15.05■□□□□ -0
SHKBP1-214ENST00000597396 ACSM6Q6P461 480 aa15.05■□□□□ -0
SHKBP1-214ENST00000597396 UXS1Q8NBZ7 420 aa15.05■□□□□ -0
SHKBP1-214ENST00000597396 DUSP18Q8NEJ0 188 aa15.05■□□□□ -0
SHKBP1-214ENST00000597396 ATP6V0BQ99437 205 aa15.05■□□□□ -0
SHKBP1-214ENST00000597396 GAR1Q9NY12 217 aaKnown RBP15.05■□□□□ -0
SHKBP1-214ENST00000597396 OR2T8A6NH00 312 aa15.04■□□□□ -0
SHKBP1-214ENST00000597396 TGOLN2O43493 480 aa15.04■□□□□ -0
SHKBP1-214ENST00000597396 IFNA10P01566 189 aa15.04■□□□□ -0
SHKBP1-214ENST00000597396 NPY1RP25929 384 aa15.04■□□□□ -0
SHKBP1-214ENST00000597396 INSL3P51460 131 aa15.04■□□□□ -0
SHKBP1-214ENST00000597396 C2orf83Q53S99 150 aa15.04■□□□□ -0
SHKBP1-214ENST00000597396 C11orf87Q6NUJ2 197 aa15.04■□□□□ -0
SHKBP1-214ENST00000597396 NOXA1Q86UR1 476 aa15.04■□□□□ -0
SHKBP1-214ENST00000597396 OR9G4Q8NGQ1 327 aa15.04■□□□□ -0
SHKBP1-214ENST00000597396 BSCL2Q96G97 398 aaPredicted RBP15.04■□□□□ -0
SHKBP1-214ENST00000597396 PEMTQ9UBM1 199 aa15.04■□□□□ -0
SHKBP1-214ENST00000597396 MPTX1A8MV57 137 aa15.03■□□□□ -0
SHKBP1-214ENST00000597396 IGHV3-48P01763 117 aa15.03■□□□□ -0
SHKBP1-214ENST00000597396 IL5P05113 134 aa15.03■□□□□ -0
SHKBP1-214ENST00000597396 OPRK1P41145 380 aa15.03■□□□□ -0
SHKBP1-214ENST00000597396 FAM106AQ4KMX7 169 aa15.03■□□□□ -0
SHKBP1-214ENST00000597396 PVRIGQ6DKI7 326 aa15.03■□□□□ -0
SHKBP1-214ENST00000597396 SPSB3Q6PJ21 355 aa15.03■□□□□ -0
SHKBP1-214ENST00000597396 C12orf45Q8N5I9 185 aaPredicted RBP15.03■□□□□ -0
SHKBP1-214ENST00000597396 GPN1Q9HCN4 374 aaPredicted RBP15.03■□□□□ -0
SHKBP1-214ENST00000597396 ZMAT5Q9UDW3 170 aaKnown RBP15.03■□□□□ -0
SHKBP1-214ENST00000597396 U3KQ87 197 aa15.03■□□□□ -0
SHKBP1-214ENST00000597396 INMT-MINDY4F8WBC2 141 aa15.02■□□□□ -0
SHKBP1-214ENST00000597396 IAPPP10997 89 aa15.02■□□□□ -0
SHKBP1-214ENST00000597396 GPHB5Q86YW7 130 aa15.02■□□□□ -0
SHKBP1-214ENST00000597396 TXN2Q99757 166 aa15.02■□□□□ -0
SHKBP1-214ENST00000597396 MAGT1Q9H0U3 335 aa15.02■□□□□ -0
SHKBP1-214ENST00000597396 SORL1Q92673 2214 aa15.02□□□□□ -0.01
SHKBP1-214ENST00000597396 IGHV3-35A0A0C4DH35 117 aa15.01□□□□□ -0.01
SHKBP1-214ENST00000597396 RPS10-NUDT3A0A1W2PQS6 291 aa15.01□□□□□ -0.01
SHKBP1-214ENST00000597396 F8W735 103 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-214ENST00000597396 WRBO00258 174 aa15.01□□□□□ -0.01
SHKBP1-214ENST00000597396 SYNGR2O43760 224 aa15.01□□□□□ -0.01
SHKBP1-214ENST00000597396 GNG7O60262 68 aa15.01□□□□□ -0.01
SHKBP1-214ENST00000597396 NKX2-1P43699 371 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-214ENST00000597396 NPBWR1P48145 328 aa15.01□□□□□ -0.01
SHKBP1-214ENST00000597396 EGFEM1PQ0D2K5 195 aa15.01□□□□□ -0.01
SHKBP1-214ENST00000597396 IAH1Q2TAA2 248 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-214ENST00000597396 RNASEH2CQ8TDP1 164 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-214ENST00000597396 CIB3Q96Q77 187 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-214ENST00000597396 ZNF320A2RRD8 509 aa15□□□□□ -0.01
SHKBP1-214ENST00000597396 FAM25EA8MYX2 175 aa15□□□□□ -0.01
SHKBP1-214ENST00000597396 CCSO14618 274 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms