RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 GINS3Q9BRX5 216 aa7.22□□□□□ -1.25
LIG1-209ENST00000596104 ZFAND3Q9H8U3 227 aa7.22□□□□□ -1.25
LIG1-209ENST00000596104 EHFQ9NZC4 300 aa7.22□□□□□ -1.25
LIG1-209ENST00000596104 ANAPC10Q9UM13 185 aa7.22□□□□□ -1.25
LIG1-209ENST00000596104 SSR3Q9UNL2 185 aa7.22□□□□□ -1.25
LIG1-209ENST00000596104 X6R8D5 127 aa7.22□□□□□ -1.25
LIG1-209ENST00000596104 RYR1P21817 5038 aa7.22□□□□□ -1.25
LIG1-209ENST00000596104 DNAH2Q9P225 4427 aa7.21□□□□□ -1.25
LIG1-209ENST00000596104 ELOA3CA0A087WX78 387 aaPredicted RBP7.21□□□□□ -1.26
LIG1-209ENST00000596104 TRAV10A0A0B4J240 114 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 IGHV3-66A0A0C4DH42 116 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 MEIS3P1A6NDR6 274 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 ST8SIA3O43173 380 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 GNG7O60262 68 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 MIFP14174 115 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 C4BPBP20851 252 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 RFX2P48378 723 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 GABARAPL2P60520 117 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 MXD1Q05195 221 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 STHQ8IWL8 128 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 SPARTQ8N0X7 666 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 ZNF2Q9BSG1 426 aaPredicted RBP7.21□□□□□ -1.26
LIG1-209ENST00000596104 RNF126Q9BV68 326 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 FXYD6Q9H0Q3 95 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 RNF167Q9H6Y7 350 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 DIABLOQ9NR28 239 aa7.21□□□□□ -1.26
LIG1-209ENST00000596104 A0A1B0GU03 582 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 K7EQG2 157 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 DNASE2O00115 360 aaPredicted RBP7.2□□□□□ -1.26
LIG1-209ENST00000596104 GPR31O00270 319 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 RTL8CO15255 209 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 IGKV1-39P01597 117 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 AMBPP02760 352 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 IGKV1D-39P04432 117 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 EIF4EP06730 217 aaKnown RBP7.2□□□□□ -1.26
LIG1-209ENST00000596104 NAT1P18440 290 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 PRCDQ00LT1 54 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 TMEM41BQ5BJD5 291 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 IDNKQ5T6J7 187 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 IZUMO2Q6UXV1 221 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 ZNF600Q6ZNG1 722 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 CMTM1Q8IZ96 169 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 DUSP18Q8NEJ0 188 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 TSPAN14Q8NG11 270 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 PINX1Q96BK5 328 aaKnown RBP7.2□□□□□ -1.26
LIG1-209ENST00000596104 SEC22AQ96IW7 307 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 IFT46Q9NQC8 304 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 FAM212BQ9NTI7 297 aaPredicted RBP7.2□□□□□ -1.26
LIG1-209ENST00000596104 PUS1Q9Y606 427 aaKnown RBP eCLIP7.2□□□□□ -1.26
LIG1-209ENST00000596104 DNAH11Q96DT5 4516 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 DNAH17Q9UFH2 4485 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 PKHD1P08F94 4074 aa7.2□□□□□ -1.26
LIG1-209ENST00000596104 PMP2P02689 132 aa7.19□□□□□ -1.26
LIG1-209ENST00000596104 SPP1P10451 314 aa7.19□□□□□ -1.26
LIG1-209ENST00000596104 NPBWR1P48145 328 aa7.19□□□□□ -1.26
LIG1-209ENST00000596104 HSPA13P48723 471 aa7.19□□□□□ -1.26
LIG1-209ENST00000596104 HSPE1P61604 102 aaKnown RBP7.19□□□□□ -1.26
LIG1-209ENST00000596104 RPL11P62913 178 aaKnown RBP7.19□□□□□ -1.26
LIG1-209ENST00000596104 PHLDA2Q53GA4 152 aa7.19□□□□□ -1.26
LIG1-209ENST00000596104 PVRIGQ6DKI7 326 aa7.19□□□□□ -1.26
LIG1-209ENST00000596104 MORN3Q6PF18 240 aaPredicted RBP7.19□□□□□ -1.26
LIG1-209ENST00000596104 CSNK1G2-AS1Q8NCQ2 148 aa7.19□□□□□ -1.26
LIG1-209ENST00000596104 FCGR1BQ92637 280 aa7.19□□□□□ -1.26
LIG1-209ENST00000596104 GRAMD2BQ96HH9 432 aa7.19□□□□□ -1.26
LIG1-209ENST00000596104 RABAC1Q9UI14 185 aa7.19□□□□□ -1.26
LIG1-209ENST00000596104 CELA1Q9UNI1 258 aa7.19□□□□□ -1.26
LIG1-209ENST00000596104 DYNC1H1Q14204 4646 aaKnown RBP7.19□□□□□ -1.26
LIG1-209ENST00000596104 PRSS29PA6NIE9 313 aa7.18□□□□□ -1.26
LIG1-209ENST00000596104 KNCNA6PVL3 124 aa7.18□□□□□ -1.26
LIG1-209ENST00000596104 TMEM50AO95807 157 aa7.18□□□□□ -1.26
LIG1-209ENST00000596104 ZNF688P0C7X2 276 aa7.18□□□□□ -1.26
LIG1-209ENST00000596104 TAS2R46P59540 309 aa7.18□□□□□ -1.26
LIG1-209ENST00000596104 C12orf74Q32Q52 190 aa7.18□□□□□ -1.26
LIG1-209ENST00000596104 H2BFWTQ7Z2G1 175 aa7.18□□□□□ -1.26
LIG1-209ENST00000596104 POM121L12Q8N7R1 296 aa7.18□□□□□ -1.26
LIG1-209ENST00000596104 OR5H2Q8NGV7 314 aa7.18□□□□□ -1.26
LIG1-209ENST00000596104 OR6F1Q8NGZ6 308 aa7.18□□□□□ -1.26
LIG1-209ENST00000596104 SCRT1Q9BWW7 348 aa7.18□□□□□ -1.26
LIG1-209ENST00000596104 TMEM231Q9H6L2 316 aa7.18□□□□□ -1.26
LIG1-209ENST00000596104 DEFB131BA0A096LNP1 70 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 INS-IGF2F8WCM5 200 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 TMEM127O75204 238 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 CRYBB3P26998 211 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 TAS2R20P59543 309 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 ERHP84090 104 aaKnown RBP7.17□□□□□ -1.26
LIG1-209ENST00000596104 IZUMO4Q1ZYL8 232 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 ZNF767PQ75MW2 155 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 TBC1D26Q86UD7 250 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 LYSMD2Q8IV50 215 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 STXBP6Q8NFX7 210 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 OR4A16Q8NH70 328 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 DCANP1Q8TF63 244 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 MRGPRFQ96AM1 343 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 KRTAP4-5Q9BYR2 181 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 VCX3BQ9H321 246 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 CLEC5AQ9NY25 188 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 MRPL36Q9P0J6 103 aaKnown RBP7.17□□□□□ -1.26
LIG1-209ENST00000596104 TBC1D24Q9ULP9 559 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 RAB26Q9ULW5 256 aa7.17□□□□□ -1.26
LIG1-209ENST00000596104 LOC100506127A0A0U1RQW1 187 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms