RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 FAM209BQ5JX69 171 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 FAAP20Q6NZ36 180 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 GPHB5Q86YW7 130 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 KIR2DL5AQ8N109 375 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 OR2C3Q8N628 320 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 OR1L8Q8NGR8 309 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 KIR2DL5BQ8NHK3 375 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 MRGPRFQ96AM1 343 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 SEC22AQ96IW7 307 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 NXF2Q9GZY0 626 aaKnown RBP10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 MFFQ9GZY8 342 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 RABL2AQ9UBK7 228 aaPredicted RBP10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 RABL2BQ9UNT1 228 aa10.09□□□□□ -0.79
SHKBP1-208ENST00000595726 MFSD2BA6NFX1 497 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 DBX1A6NMT0 343 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 C15orf61A6NNL5 157 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 SNAPC5O75971 98 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 TRAPPC2P0DI81 140 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 TRAPPC2BP0DI82 140 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 MFAP2P55001 183 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 PIGPP57054 158 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 WT1-ASQ06250 92 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 SCGB2B2Q4G0G5 96 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 CLEC19AQ6UXS0 136 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 RBPMS2Q6ZRY4 209 aaKnown RBP10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 HSD17B13Q7Z5P4 300 aaPredicted RBP10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 GDPD1Q8N9F7 314 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 TERB2Q8NHR7 220 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 MCFD2Q8NI22 146 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 LSM10Q969L4 123 aaKnown RBP10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 TSC22D3Q99576 134 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 RARRES2Q99969 163 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 RBM38Q9H0Z9 239 aaKnown RBP10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 MAP6D1Q9H9H5 199 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 NDUFA4L2Q9NRX3 87 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 TMEM14BQ9NUH8 114 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 PRNDQ9UKY0 176 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 OR51B2Q9Y5P1 312 aa10.08□□□□□ -0.8
SHKBP1-208ENST00000595726 GSTZ1O43708 216 aaPredicted RBP10.07□□□□□ -0.8
SHKBP1-208ENST00000595726 SERPINE2P07093 398 aa10.07□□□□□ -0.8
SHKBP1-208ENST00000595726 MEF2DQ14814 521 aa10.07□□□□□ -0.8
SHKBP1-208ENST00000595726 ODF3L2Q3SX64 289 aa10.07□□□□□ -0.8
SHKBP1-208ENST00000595726 OR4C16Q8NGL9 310 aa10.07□□□□□ -0.8
SHKBP1-208ENST00000595726 OR13C8Q8NGS7 320 aa10.07□□□□□ -0.8
SHKBP1-208ENST00000595726 OR5B3Q8NH48 314 aa10.07□□□□□ -0.8
SHKBP1-208ENST00000595726 MARCH1Q8TCQ1 289 aa10.07□□□□□ -0.8
SHKBP1-208ENST00000595726 EEF1AKMT3Q96AZ1 226 aa10.07□□□□□ -0.8
SHKBP1-208ENST00000595726 TP53RKQ96S44 253 aa10.07□□□□□ -0.8
SHKBP1-208ENST00000595726 CCDC160A6NGH7 325 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 CTSDP07339 412 aaPredicted RBP10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 AKAIN1P0CW23 69 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 OR13C7P0DN81 318 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 TNFSF8P32971 234 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 ARL3P36405 182 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 FAM106AQ4KMX7 169 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 UNQ9165/PRO28630Q6UXU0 137 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 H2BFWTQ7Z2G1 175 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 MAPKAPK5-AS1Q8N8E1 139 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 OR11H2Q8NH07 326 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 ZFAND1Q8TCF1 268 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 CXorf58Q96LI9 332 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 SOSTQ9BQB4 213 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 HINT2Q9BX68 163 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 FKBP11Q9NYL4 201 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 COPZ2Q9P299 210 aa10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 RSL24D1Q9UHA3 163 aaKnown RBP10.06□□□□□ -0.8
SHKBP1-208ENST00000595726 TRBV7-1A0A0A6YYK4 115 aa10.05□□□□□ -0.8
SHKBP1-208ENST00000595726 TRAV25A0A0B4J276 109 aa10.05□□□□□ -0.8
SHKBP1-208ENST00000595726 C3orf85A0A1B0GTC6 90 aa10.05□□□□□ -0.8
SHKBP1-208ENST00000595726 ANKRD20A5PA0PJZ0 165 aa10.05□□□□□ -0.8
SHKBP1-208ENST00000595726 A8MWP6 167 aa10.05□□□□□ -0.8
SHKBP1-208ENST00000595726 DISC1C4P0D8 188 aa10.05□□□□□ -0.8
SHKBP1-208ENST00000595726 IGKV1-5P01602 117 aa10.05□□□□□ -0.8
SHKBP1-208ENST00000595726 ZNF124Q15973 351 aa10.05□□□□□ -0.8
SHKBP1-208ENST00000595726 APRG1Q8IVJ8 170 aa10.05□□□□□ -0.8
SHKBP1-208ENST00000595726 CCDC71LQ8N9Z2 235 aa10.05□□□□□ -0.8
SHKBP1-208ENST00000595726 ZNF502Q8TBZ5 544 aa10.05□□□□□ -0.8
SHKBP1-208ENST00000595726 TMEM56Q96MV1 263 aa10.05□□□□□ -0.8
SHKBP1-208ENST00000595726 THYN1Q9P016 225 aa10.05□□□□□ -0.8
SHKBP1-208ENST00000595726 F11RQ9Y624 299 aaKnown RBP10.05□□□□□ -0.8
SHKBP1-208ENST00000595726 IGHV3-35A0A0C4DH35 117 aa10.04□□□□□ -0.8
SHKBP1-208ENST00000595726 FABP12A6NFH5 140 aa10.04□□□□□ -0.8
SHKBP1-208ENST00000595726 CYB5BO43169 146 aa10.04□□□□□ -0.8
SHKBP1-208ENST00000595726 P0C879 139 aa10.04□□□□□ -0.8
SHKBP1-208ENST00000595726 UCP1P25874 307 aa10.04□□□□□ -0.8
SHKBP1-208ENST00000595726 GPR183P32249 361 aa10.04□□□□□ -0.8
SHKBP1-208ENST00000595726 SURF2Q15527 256 aaPredicted RBP10.04□□□□□ -0.8
SHKBP1-208ENST00000595726 IZUMO4Q1ZYL8 232 aa10.04□□□□□ -0.8
SHKBP1-208ENST00000595726 OR4A16Q8NH70 328 aa10.04□□□□□ -0.8
SHKBP1-208ENST00000595726 RTBDNQ9BSG5 229 aaPredicted RBP10.04□□□□□ -0.8
SHKBP1-208ENST00000595726 DNAH5Q8TE73 4624 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 B3GALNT1O75752 331 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 CLEC3BP05452 202 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 C8orf88P0DMB2 117 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 AKR1C2P52895 323 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 PRCDQ00LT1 54 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 TRIM16LQ309B1 348 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 SP6Q3SY56 376 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 SLC25A24Q6NUK1 477 aa10.03□□□□□ -0.8
SHKBP1-208ENST00000595726 OR51S1Q8NGJ8 323 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms