RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 FAM90A26D6RGX4 464 aa11.5□□□□□ -0.57
DDX39A-221ENST00000593026 PRAF2O60831 178 aa11.5□□□□□ -0.57
DDX39A-221ENST00000593026 PTTG1O95997 202 aa11.5□□□□□ -0.57
DDX39A-221ENST00000593026 RNASE2P10153 161 aaKnown RBP11.5□□□□□ -0.57
DDX39A-221ENST00000593026 HTR2BP41595 481 aa11.5□□□□□ -0.57
DDX39A-221ENST00000593026 SLURP1P55000 103 aa11.5□□□□□ -0.57
DDX39A-221ENST00000593026 CCDC140Q96MF4 163 aa11.5□□□□□ -0.57
DDX39A-221ENST00000593026 MARVELD1Q9BSK0 173 aa11.5□□□□□ -0.57
DDX39A-221ENST00000593026 IGHV3-21A0A0B4J1V1 117 aa11.49□□□□□ -0.57
DDX39A-221ENST00000593026 K7EIM0 57 aa11.49□□□□□ -0.57
DDX39A-221ENST00000593026 MED6O75586 246 aa11.49□□□□□ -0.57
DDX39A-221ENST00000593026 HOXD3P31249 432 aaPredicted RBP11.49□□□□□ -0.57
DDX39A-221ENST00000593026 DCTN2Q13561 401 aaKnown RBP11.49□□□□□ -0.57
DDX39A-221ENST00000593026 IAH1Q2TAA2 248 aaPredicted RBP11.49□□□□□ -0.57
DDX39A-221ENST00000593026 BSXQ3C1V8 233 aa11.49□□□□□ -0.57
DDX39A-221ENST00000593026 CLEC19AQ6UXS0 136 aa11.49□□□□□ -0.57
DDX39A-221ENST00000593026 SLC24A4Q8NFF2 622 aa11.49□□□□□ -0.57
DDX39A-221ENST00000593026 ZNF502Q8TBZ5 544 aa11.49□□□□□ -0.57
DDX39A-221ENST00000593026 PINX1Q96BK5 328 aaKnown RBP11.49□□□□□ -0.57
DDX39A-221ENST00000593026 RCC1LQ96I51 464 aaKnown RBP11.49□□□□□ -0.57
DDX39A-221ENST00000593026 CORTO00230 105 aa11.48□□□□□ -0.57
DDX39A-221ENST00000593026 BMPR1BO00238 502 aa11.48□□□□□ -0.57
DDX39A-221ENST00000593026 CCSO14618 274 aa11.48□□□□□ -0.57
DDX39A-221ENST00000593026 MT-CO2P00403 227 aa11.48□□□□□ -0.57
DDX39A-221ENST00000593026 IGLL1P15814 213 aa11.48□□□□□ -0.57
DDX39A-221ENST00000593026 SPNP16150 400 aa11.48□□□□□ -0.57
DDX39A-221ENST00000593026 ARL3P36405 182 aa11.48□□□□□ -0.57
DDX39A-221ENST00000593026 RPEL1Q2QD12 228 aa11.48□□□□□ -0.57
DDX39A-221ENST00000593026 C11orf87Q6NUJ2 197 aa11.48□□□□□ -0.57
DDX39A-221ENST00000593026 SCARB1Q8WTV0 552 aa11.48□□□□□ -0.57
DDX39A-221ENST00000593026 DCUN1D4Q92564 292 aa11.48□□□□□ -0.57
DDX39A-221ENST00000593026 DLX4Q92988 240 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-221ENST00000593026 MCRIP2Q9BUT9 160 aaKnown RBP11.48□□□□□ -0.57
DDX39A-221ENST00000593026 C21orf62Q9NYP8 219 aa11.48□□□□□ -0.57
DDX39A-221ENST00000593026 MGAM2Q2M2H8 2515 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 SNRPGP15A8MWD9 76 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 FAM25EA8MYX2 175 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 PPP5D1E7EU14 171 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 I3L2K1 104 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 OVOL1O14753 267 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 IFNA10P01566 189 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 CLEC3BP05452 202 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 IAPPP10997 89 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 NPY1RP25929 384 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 GPR183P32249 361 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 C2orf83Q53S99 150 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 PVRIGQ6DKI7 326 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 NOXA1Q86UR1 476 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 OR4D5Q8NGN0 318 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 OR10C1Q96KK4 312 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 MAGT1Q9H0U3 335 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 U3KQ87 197 aa11.47□□□□□ -0.57
DDX39A-221ENST00000593026 C5orf51A6NDU8 294 aa11.46□□□□□ -0.57
DDX39A-221ENST00000593026 WRBO00258 174 aa11.46□□□□□ -0.57
DDX39A-221ENST00000593026 SYNGR2O43760 224 aa11.46□□□□□ -0.57
DDX39A-221ENST00000593026 GGCTO75223 188 aaKnown RBP11.46□□□□□ -0.57
DDX39A-221ENST00000593026 NKX2-1P43699 371 aaPredicted RBP11.46□□□□□ -0.57
DDX39A-221ENST00000593026 ID3Q02535 119 aa11.46□□□□□ -0.57
DDX39A-221ENST00000593026 Q56UQ5 140 aa11.46□□□□□ -0.57
DDX39A-221ENST00000593026 OXLD1Q5BKU9 147 aa11.46□□□□□ -0.57
DDX39A-221ENST00000593026 ZBTB8BQ8NAP8 495 aaPredicted RBP11.46□□□□□ -0.57
DDX39A-221ENST00000593026 UBAC2Q8NBM4 344 aa11.46□□□□□ -0.57
DDX39A-221ENST00000593026 CIB3Q96Q77 187 aaPredicted RBP11.46□□□□□ -0.57
DDX39A-221ENST00000593026 ATP6V0BQ99437 205 aa11.46□□□□□ -0.57
DDX39A-221ENST00000593026 GSKIPQ9P0R6 139 aa11.46□□□□□ -0.57
DDX39A-221ENST00000593026 OR2T8A6NH00 312 aa11.45□□□□□ -0.58
DDX39A-221ENST00000593026 G3V4G9 280 aa11.45□□□□□ -0.58
DDX39A-221ENST00000593026 SCGB1D2O95969 90 aa11.45□□□□□ -0.58
DDX39A-221ENST00000593026 IGHV3-48P01763 117 aa11.45□□□□□ -0.58
DDX39A-221ENST00000593026 OPRK1P41145 380 aa11.45□□□□□ -0.58
DDX39A-221ENST00000593026 MFAP4P55083 255 aa11.45□□□□□ -0.58
DDX39A-221ENST00000593026 SYNJ2BPP57105 145 aa11.45□□□□□ -0.58
DDX39A-221ENST00000593026 KLF5Q13887 457 aaPredicted RBP11.45□□□□□ -0.58
DDX39A-221ENST00000593026 TATDN3Q17R31 274 aa11.45□□□□□ -0.58
DDX39A-221ENST00000593026 GSG1LQ6UXU4 331 aa11.45□□□□□ -0.58
DDX39A-221ENST00000593026 C1QL4Q86Z23 238 aa11.45□□□□□ -0.58
DDX39A-221ENST00000593026 RNASEH2CQ8TDP1 164 aaKnown RBP11.45□□□□□ -0.58
DDX39A-221ENST00000593026 BSCL2Q96G97 398 aaPredicted RBP11.45□□□□□ -0.58
DDX39A-221ENST00000593026 GPR61Q9BZJ8 451 aa11.45□□□□□ -0.58
DDX39A-221ENST00000593026 ZC4H2Q9NQZ6 224 aa11.45□□□□□ -0.58
DDX39A-221ENST00000593026 GAR1Q9NY12 217 aaKnown RBP11.45□□□□□ -0.58
DDX39A-221ENST00000593026 RPS10-NUDT3A0A1W2PQS6 291 aa11.44□□□□□ -0.58
DDX39A-221ENST00000593026 SEC14L6B5MCN3 397 aa11.44□□□□□ -0.58
DDX39A-221ENST00000593026 F8W735 103 aaPredicted RBP11.44□□□□□ -0.58
DDX39A-221ENST00000593026 TGOLN2O43493 480 aa11.44□□□□□ -0.58
DDX39A-221ENST00000593026 OR2C1O95371 312 aa11.44□□□□□ -0.58
DDX39A-221ENST00000593026 LY86O95711 162 aa11.44□□□□□ -0.58
DDX39A-221ENST00000593026 ATP5IP56385 69 aaPredicted RBP11.44□□□□□ -0.58
DDX39A-221ENST00000593026 POLR2GP62487 172 aaKnown RBP eCLIP11.44□□□□□ -0.58
DDX39A-221ENST00000593026 RGS21Q2M5E4 152 aa11.44□□□□□ -0.58
DDX39A-221ENST00000593026 SAMD5Q5TGI4 173 aa11.44□□□□□ -0.58
DDX39A-221ENST00000593026 ACSM6Q6P461 480 aa11.44□□□□□ -0.58
DDX39A-221ENST00000593026 SPSB3Q6PJ21 355 aa11.44□□□□□ -0.58
DDX39A-221ENST00000593026 TMEM170AQ8WVE7 144 aa11.44□□□□□ -0.58
DDX39A-221ENST00000593026 C2orf50Q96LR7 162 aa11.44□□□□□ -0.58
DDX39A-221ENST00000593026 TXN2Q99757 166 aa11.44□□□□□ -0.58
DDX39A-221ENST00000593026 SSSCA1O60232 199 aa11.43□□□□□ -0.58
DDX39A-221ENST00000593026 GNG7O60262 68 aa11.43□□□□□ -0.58
DDX39A-221ENST00000593026 IFNA4P05014 189 aa11.43□□□□□ -0.58
DDX39A-221ENST00000593026 FCGR2BP31994 310 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms