RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 OR7C2O60412 319 aa13.4□□□□□ -0.26
PRKCSH-217ENST00000592741 FABP4P15090 132 aa13.4□□□□□ -0.26
PRKCSH-217ENST00000592741 FOXL1Q12952 345 aa13.4□□□□□ -0.26
PRKCSH-217ENST00000592741 OCC1Q8TAD7 63 aa13.4□□□□□ -0.26
PRKCSH-217ENST00000592741 MRPL32Q9BYC8 188 aaKnown RBP13.4□□□□□ -0.26
PRKCSH-217ENST00000592741 RALYQ9UKM9 306 aaKnown RBP13.4□□□□□ -0.26
PRKCSH-217ENST00000592741 LY96Q9Y6Y9 160 aa13.4□□□□□ -0.26
PRKCSH-217ENST00000592741 SLC25A17O43808 307 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 HNF1AP20823 631 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 CA7P43166 264 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 LGALS7P47929 136 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 CTAG1AP78358 180 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 WT1-ASQ06250 92 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 C10orf55Q5SWW7 151 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 OR10G8Q8NGN5 311 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 OR1P1Q8NH06 330 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 OR2T6Q8NHC8 308 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 TNFRSF14Q92956 283 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 RNF2Q99496 336 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 ATMQ13315 3056 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 TNCP24821 2201 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 CGB1A6NKQ9 187 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 ENSAO43768 121 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 COL8A2P25067 703 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 PPOXP50336 477 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 FBXL19-AS1Q494R0 122 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 TEX38Q6PEX7 206 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 C11orf42Q8N5U0 333 aa13.39□□□□□ -0.27
PRKCSH-217ENST00000592741 A0A0U1RQK1 487 aa13.38□□□□□ -0.27
PRKCSH-217ENST00000592741 ZNF320A2RRD8 509 aa13.38□□□□□ -0.27
PRKCSH-217ENST00000592741 XKRY2A2RUG3 117 aa13.38□□□□□ -0.27
PRKCSH-217ENST00000592741 C8orf88P0DMB2 117 aa13.38□□□□□ -0.27
PRKCSH-217ENST00000592741 MUC15Q8N387 334 aa13.38□□□□□ -0.27
PRKCSH-217ENST00000592741 SGMS2Q8NHU3 365 aa13.38□□□□□ -0.27
PRKCSH-217ENST00000592741 ZNF503Q96F45 646 aa13.38□□□□□ -0.27
PRKCSH-217ENST00000592741 PRRX1P54821 245 aa13.37□□□□□ -0.27
PRKCSH-217ENST00000592741 UCNP55089 124 aa13.37□□□□□ -0.27
PRKCSH-217ENST00000592741 COA6Q5JTJ3 125 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-217ENST00000592741 MRPL41Q8IXM3 137 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-217ENST00000592741 PACRGQ96M98 296 aaPredicted RBP13.37□□□□□ -0.27
PRKCSH-217ENST00000592741 PCNX1Q96RV3 2341 aa13.37□□□□□ -0.27
PRKCSH-217ENST00000592741 IGHV2-26A0A0B4J1V2 119 aa13.37□□□□□ -0.27
PRKCSH-217ENST00000592741 LINC00587B1AMM8 73 aa13.37□□□□□ -0.27
PRKCSH-217ENST00000592741 TMEM37Q8WXS4 190 aa13.37□□□□□ -0.27
PRKCSH-217ENST00000592741 EAF1Q96JC9 268 aaPredicted RBP13.37□□□□□ -0.27
PRKCSH-217ENST00000592741 HIST1H2BLQ99880 126 aa13.37□□□□□ -0.27
PRKCSH-217ENST00000592741 SLC25A33Q9BSK2 321 aa13.37□□□□□ -0.27
PRKCSH-217ENST00000592741 TPSG1Q9NRR2 321 aa13.37□□□□□ -0.27
PRKCSH-217ENST00000592741 ARFGEF3Q5TH69 2177 aa13.37□□□□□ -0.27
PRKCSH-217ENST00000592741 IGHV3-72A0A0B4J1Y9 119 aa13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 LYNX1G3V0Z9 82 aa13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 LYNX1P0DP58 116 aa13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 TEX45Q8NA69 505 aa13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 FNDC4Q9H6D8 234 aaPredicted RBP13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 DMRT1Q9Y5R6 373 aa13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 A0A1W2PPI3 338 aa13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 PSMB11A5LHX3 300 aa13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 K7EN84 100 aa13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 CCL21O00585 134 aa13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 FSTL3O95633 263 aa13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 OR1L4Q8NGR5 311 aa13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 RITA1Q96K30 269 aa13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 PFDN5Q99471 154 aa13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 DNAJC4Q9NNZ3 241 aa13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 MAP1BP46821 2468 aaKnown RBP13.36□□□□□ -0.27
PRKCSH-217ENST00000592741 A0A1W2PRE2 83 aa13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 TCRBV4S1A1TA0A5B7 111 aa13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 HELTA6NFD8 242 aa13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 COX7A2P2O60397 106 aa13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 IGHV2-70P01814 119 aa13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 OR10J4P0C629 311 aa13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 CRYBB3P26998 211 aa13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 GNG4P50150 75 aa13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 RPL15P61313 204 aaKnown RBP13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 ZNF672Q499Z4 452 aaPredicted RBP13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 ZNF841Q6ZN19 808 aa13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 MMD2Q8IY49 270 aa13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 NPIPB3Q92617 1050 aa13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 CLEC7AQ9BXN2 247 aa13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 TRAPPC1Q9Y5R8 145 aa13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 ROS1P08922 2347 aa13.35□□□□□ -0.27
PRKCSH-217ENST00000592741 GRNP28799 593 aaKnown RBP13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 PDLIM4P50479 330 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 BPIFB3P59826 476 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 SSBP2P81877 361 aaPredicted RBP13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 DNLZQ5SXM8 178 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 ETFRF1Q6IPR1 90 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 THAP8Q8NA92 274 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 ST6GALNAC3Q8NDV1 305 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 SLC25A2Q9BXI2 301 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 IL36BQ9NZH7 164 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 TRAV9-1A0A075B6T8 112 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 SIAH2O43255 324 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 IGLV1-47P01700 117 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 RBP4P02753 201 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 REG1AP05451 166 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 SELENOTP62341 195 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 MRGPRG-AS1Q2M3A8 158 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 CENPWQ5EE01 88 aa13.34□□□□□ -0.27
PRKCSH-217ENST00000592741 INSIG2Q9Y5U4 225 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms