RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 PFDN1O60925 122 aa12.95□□□□□ -0.34
GCDH-213ENST00000590627 IFNA10P01566 189 aa12.95□□□□□ -0.34
GCDH-213ENST00000590627 REG1AP05451 166 aa12.95□□□□□ -0.34
GCDH-213ENST00000590627 NPY1RP25929 384 aa12.95□□□□□ -0.34
GCDH-213ENST00000590627 CD300CQ08708 224 aa12.95□□□□□ -0.34
GCDH-213ENST00000590627 ARSJQ5FYB0 599 aaPredicted RBP12.95□□□□□ -0.34
GCDH-213ENST00000590627 SPANXN5Q5MJ07 72 aa12.95□□□□□ -0.34
GCDH-213ENST00000590627 TMEM14EPQ6UXP3 125 aa12.95□□□□□ -0.34
GCDH-213ENST00000590627 OR5T1Q8NG75 326 aa12.95□□□□□ -0.34
GCDH-213ENST00000590627 TMEM170AQ8WVE7 144 aa12.95□□□□□ -0.34
GCDH-213ENST00000590627 OR4C12Q96R67 309 aa12.95□□□□□ -0.34
GCDH-213ENST00000590627 LINC00527Q9UJ94 153 aa12.95□□□□□ -0.34
GCDH-213ENST00000590627 STRAPQ9Y3F4 350 aaKnown RBP12.95□□□□□ -0.34
GCDH-213ENST00000590627 H3BUA1 57 aa12.94□□□□□ -0.34
GCDH-213ENST00000590627 SOX15O60248 233 aa12.94□□□□□ -0.34
GCDH-213ENST00000590627 IGLV1-40P01703 118 aa12.94□□□□□ -0.34
GCDH-213ENST00000590627 C1QBP02746 253 aa12.94□□□□□ -0.34
GCDH-213ENST00000590627 BEAN1Q3B7T3 259 aa12.94□□□□□ -0.34
GCDH-213ENST00000590627 H3BP45 60 aa12.93□□□□□ -0.34
GCDH-213ENST00000590627 IGHG4P01861 327 aa12.93□□□□□ -0.34
GCDH-213ENST00000590627 HIST1H1BP16401 226 aaKnown RBP12.93□□□□□ -0.34
GCDH-213ENST00000590627 CAV2P51636 162 aa12.93□□□□□ -0.34
GCDH-213ENST00000590627 MFAP2P55001 183 aa12.93□□□□□ -0.34
GCDH-213ENST00000590627 KPRPQ5T749 579 aaPredicted RBP12.93□□□□□ -0.34
GCDH-213ENST00000590627 TMEM252Q8N6L7 170 aa12.93□□□□□ -0.34
GCDH-213ENST00000590627 OR11H4Q8NGC9 324 aa12.93□□□□□ -0.34
GCDH-213ENST00000590627 DCUN1D4Q92564 292 aa12.93□□□□□ -0.34
GCDH-213ENST00000590627 FANCD2OSQ96PS1 177 aa12.93□□□□□ -0.34
GCDH-213ENST00000590627 DMRT1Q9Y5R6 373 aa12.93□□□□□ -0.34
GCDH-213ENST00000590627 IGLV11-55A0A075B6I3 123 aa12.92□□□□□ -0.34
GCDH-213ENST00000590627 FXYD6-FXYD2A0A087WZ82 144 aa12.92□□□□□ -0.34
GCDH-213ENST00000590627 TRBV9A0A0B4J1U6 114 aa12.92□□□□□ -0.34
GCDH-213ENST00000590627 FAM24AA6NFZ4 105 aa12.92□□□□□ -0.34
GCDH-213ENST00000590627 PMS2P5A8MQ11 134 aa12.92□□□□□ -0.34
GCDH-213ENST00000590627 HMSDA8MTL9 139 aa12.92□□□□□ -0.34
GCDH-213ENST00000590627 CYB5BO43169 146 aa12.92□□□□□ -0.34
GCDH-213ENST00000590627 SCAF4O95104 1147 aaKnown RBP12.92□□□□□ -0.34
GCDH-213ENST00000590627 DEFA4P12838 97 aa12.92□□□□□ -0.34
GCDH-213ENST00000590627 RAB11AP62491 216 aa12.92□□□□□ -0.34
GCDH-213ENST00000590627 SLC35B1P78383 322 aa12.92□□□□□ -0.34
GCDH-213ENST00000590627 SAMD5Q5TGI4 173 aa12.92□□□□□ -0.34
GCDH-213ENST00000590627 C19orf35Q6ZS72 473 aa12.92□□□□□ -0.34
GCDH-213ENST00000590627 ZNF546Q86UE3 836 aa12.92□□□□□ -0.34
GCDH-213ENST00000590627 RNASEH2CQ8TDP1 164 aaKnown RBP12.92□□□□□ -0.34
GCDH-213ENST00000590627 WIPF2Q8TF74 440 aaPredicted RBP12.92□□□□□ -0.34
GCDH-213ENST00000590627 SLC25A31Q9H0C2 315 aa12.92□□□□□ -0.34
GCDH-213ENST00000590627 TNFSF18Q9UNG2 199 aa12.92□□□□□ -0.34
GCDH-213ENST00000590627 IGSF23A1L1A6 192 aa12.91□□□□□ -0.34
GCDH-213ENST00000590627 PSMB11A5LHX3 300 aa12.91□□□□□ -0.34
GCDH-213ENST00000590627 G3V4G9 280 aa12.91□□□□□ -0.34
GCDH-213ENST00000590627 CORTO00230 105 aa12.91□□□□□ -0.34
GCDH-213ENST00000590627 BAXQ07812 192 aa12.91□□□□□ -0.34
GCDH-213ENST00000590627 REC114Q7Z4M0 266 aa12.91□□□□□ -0.34
GCDH-213ENST00000590627 COMMD1Q8N668 190 aa12.91□□□□□ -0.34
GCDH-213ENST00000590627 KLHDC1Q8N7A1 406 aa12.91□□□□□ -0.34
GCDH-213ENST00000590627 RNF152Q8N8N0 203 aa12.91□□□□□ -0.34
GCDH-213ENST00000590627 HYLS1Q96M11 299 aa12.91□□□□□ -0.34
GCDH-213ENST00000590627 AQP10Q96PS8 301 aa12.91□□□□□ -0.34
GCDH-213ENST00000590627 PRSS46E5RG02 174 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 PRH1P02810 166 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 ELANEP08246 267 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 OR8U8P0C7N1 319 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 METTL15P1P0C7V9 234 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 PSMB8P28062 276 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 RPL12P30050 165 aaKnown RBP12.9□□□□□ -0.34
GCDH-213ENST00000590627 SULT1A1P50225 295 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 FOXE3Q13461 319 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 EXOSC2Q13868 293 aaKnown RBP12.9□□□□□ -0.34
GCDH-213ENST00000590627 ZFP69Q49AA0 526 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 SLC25A24Q6NUK1 477 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 TEX38Q6PEX7 206 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 ETV3LQ6ZN32 361 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 CENPVQ7Z7K6 275 aaPredicted RBP12.9□□□□□ -0.34
GCDH-213ENST00000590627 ZNF329Q86UD4 541 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 STX12Q86Y82 276 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 NECAP1Q8NC96 275 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 SLA2Q9H6Q3 261 aa12.9□□□□□ -0.34
GCDH-213ENST00000590627 IFNA4P05014 189 aa12.89□□□□□ -0.35
GCDH-213ENST00000590627 NUP62P37198 522 aaPredicted RBP12.89□□□□□ -0.35
GCDH-213ENST00000590627 EWSR1Q01844 656 aaKnown RBP eCLIP12.89□□□□□ -0.35
GCDH-213ENST00000590627 ACOT7LQ6ZUV0 252 aa12.89□□□□□ -0.35
GCDH-213ENST00000590627 HAPLN4Q86UW8 402 aa12.89□□□□□ -0.35
GCDH-213ENST00000590627 C11orf44Q8N8P7 122 aa12.89□□□□□ -0.35
GCDH-213ENST00000590627 INO80EQ8NBZ0 244 aaPredicted RBP12.89□□□□□ -0.35
GCDH-213ENST00000590627 THYN1Q9P016 225 aa12.89□□□□□ -0.35
GCDH-213ENST00000590627 PAIP2BQ9ULR5 123 aaKnown RBP12.89□□□□□ -0.35
GCDH-213ENST00000590627 NOTCH3Q9UM47 2321 aa12.89□□□□□ -0.35
GCDH-213ENST00000590627 RNF222A6NCQ9 220 aa12.88□□□□□ -0.35
GCDH-213ENST00000590627 FAM223BA6NKX1 122 aa12.88□□□□□ -0.35
GCDH-213ENST00000590627 I3L2K1 104 aa12.88□□□□□ -0.35
GCDH-213ENST00000590627 ARPC5O15511 151 aa12.88□□□□□ -0.35
GCDH-213ENST00000590627 CST7O76096 145 aa12.88□□□□□ -0.35
GCDH-213ENST00000590627 GPX4P36969 197 aaPredicted RBP12.88□□□□□ -0.35
GCDH-213ENST00000590627 RHOGP84095 191 aa12.88□□□□□ -0.35
GCDH-213ENST00000590627 ARL16Q0P5N6 197 aa12.88□□□□□ -0.35
GCDH-213ENST00000590627 FAM223AQ8IWN6 122 aa12.88□□□□□ -0.35
GCDH-213ENST00000590627 OR10P1Q8NGE3 313 aa12.88□□□□□ -0.35
GCDH-213ENST00000590627 MYOZ3Q8TDC0 251 aa12.88□□□□□ -0.35
GCDH-213ENST00000590627 CACNG8Q8WXS5 425 aa12.88□□□□□ -0.35
GCDH-213ENST00000590627 GGACTQ9BVM4 153 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms