RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SCRG1O75711 98 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 IGLV2-8P01709 118 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 HIST1H1AQ02539 215 aaPredicted RBP12.51□□□□□ -0.41
CIRBP-228ENST00000590347 Q6ZSR3 168 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 ATP6V0BQ99437 205 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 OCIAD1Q9NX40 245 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 TRAV5A0A0B4J249 113 aa12.5□□□□□ -0.41
CIRBP-228ENST00000590347 A0A1B0GV72 72 aa12.5□□□□□ -0.41
CIRBP-228ENST00000590347 IZUMO1RA6ND01 250 aa12.5□□□□□ -0.41
CIRBP-228ENST00000590347 CDIPTO14735 213 aa12.5□□□□□ -0.41
CIRBP-228ENST00000590347 ATP5G2Q06055 141 aa12.5□□□□□ -0.41
CIRBP-228ENST00000590347 WIPI1Q5MNZ9 446 aaPredicted RBP12.5□□□□□ -0.41
CIRBP-228ENST00000590347 Q6ZS49 121 aa12.5□□□□□ -0.41
CIRBP-228ENST00000590347 FAM214BQ7L5A3 538 aa12.5□□□□□ -0.41
CIRBP-228ENST00000590347 ANKRD37Q7Z713 158 aa12.5□□□□□ -0.41
CIRBP-228ENST00000590347 SIGMAR1Q99720 223 aa12.5□□□□□ -0.41
CIRBP-228ENST00000590347 LOC400499M0QZD8 3231 aa12.5□□□□□ -0.41
CIRBP-228ENST00000590347 REG1AP05451 166 aa12.5□□□□□ -0.41
CIRBP-228ENST00000590347 AAED1Q7RTV5 226 aa12.5□□□□□ -0.41
CIRBP-228ENST00000590347 SNRNP40Q96DI7 357 aaKnown RBP12.5□□□□□ -0.41
CIRBP-228ENST00000590347 C1orf159Q96HA4 380 aa12.5□□□□□ -0.41
CIRBP-228ENST00000590347 PRRG4Q9BZD6 226 aa12.5□□□□□ -0.41
CIRBP-228ENST00000590347 TMEM191AQ9H0A3 160 aa12.5□□□□□ -0.41
CIRBP-228ENST00000590347 K7EP34 96 aa12.49□□□□□ -0.41
CIRBP-228ENST00000590347 K7ERJ3 54 aa12.49□□□□□ -0.41
CIRBP-228ENST00000590347 SUMO3P55854 103 aaPredicted RBP12.49□□□□□ -0.41
CIRBP-228ENST00000590347 MLANAQ16655 118 aa12.49□□□□□ -0.41
CIRBP-228ENST00000590347 DCTN5Q9BTE1 182 aa12.49□□□□□ -0.41
CIRBP-228ENST00000590347 RABAC1Q9UI14 185 aa12.49□□□□□ -0.41
CIRBP-228ENST00000590347 FCGR3BO75015 233 aa12.49□□□□□ -0.41
CIRBP-228ENST00000590347 HLA-DRB1P01911 266 aa12.49□□□□□ -0.41
CIRBP-228ENST00000590347 HBZP02008 142 aa12.49□□□□□ -0.41
CIRBP-228ENST00000590347 OR2Z1Q8NG97 314 aa12.49□□□□□ -0.41
CIRBP-228ENST00000590347 TRIB1Q96RU8 372 aa12.49□□□□□ -0.41
CIRBP-228ENST00000590347 JKAMPQ9P055 326 aa12.49□□□□□ -0.41
CIRBP-228ENST00000590347 C9JCJ5 164 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 FAM90A26D6RGX4 464 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 CHEK1O14757 476 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 CXCL13O43927 109 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 IGHV3-48P01763 117 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 ADH4P08319 380 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 PRAMEF5Q5TYX0 476 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 PRAMEF6Q5VXH4 476 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 SH2D6Q7Z4S9 175 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 BLNKQ8WV28 456 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 C1QTNF5Q9BXJ0 243 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 PSG11Q9UQ72 335 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 TET2Q6N021 2002 aaPredicted RBP12.48□□□□□ -0.41
CIRBP-228ENST00000590347 SMIM27A0A1W2PRY6 76 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 OR2H2O95918 312 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 AESQ08117 197 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 HSD52Q0P140 79 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 KLF13Q9Y2Y9 288 aaPredicted RBP12.48□□□□□ -0.41
CIRBP-228ENST00000590347 C9orf118A6NHY6 69 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.48□□□□□ -0.41
CIRBP-228ENST00000590347 PLAUP00749 431 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 CCL3P10147 92 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 GATA3P23771 443 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 GNG5P63218 68 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 GUSBP1Q15486 140 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 NEGR1Q7Z3B1 354 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 RAB1CQ92928 201 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 SRSF8Q9BRL6 282 aaKnown RBP12.48□□□□□ -0.41
CIRBP-228ENST00000590347 OSTCQ9NRP0 149 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 DUSP13Q9UII6 198 aa12.48□□□□□ -0.41
CIRBP-228ENST00000590347 IGHV5-10-1A0A0J9YXX1 117 aa12.47□□□□□ -0.41
CIRBP-228ENST00000590347 OPRK1P41145 380 aa12.47□□□□□ -0.41
CIRBP-228ENST00000590347 MORN5Q5VZ52 161 aa12.47□□□□□ -0.41
CIRBP-228ENST00000590347 WFDC3Q8IUB2 231 aa12.47□□□□□ -0.41
CIRBP-228ENST00000590347 ASCL2Q99929 193 aa12.47□□□□□ -0.41
CIRBP-228ENST00000590347 TTTY13Q9BZ97 58 aa12.47□□□□□ -0.41
CIRBP-228ENST00000590347 ZNF503-AS2A6NEH8 195 aa12.47□□□□□ -0.41
CIRBP-228ENST00000590347 SLC35E4Q6ICL7 350 aa12.47□□□□□ -0.41
CIRBP-228ENST00000590347 CCDC144NLQ6NUI1 221 aa12.47□□□□□ -0.41
CIRBP-228ENST00000590347 NFAM1Q8NET5 270 aaPredicted RBP12.47□□□□□ -0.41
CIRBP-228ENST00000590347 CPT1CQ8TCG5 803 aa12.47□□□□□ -0.41
CIRBP-228ENST00000590347 PGLYRP4Q96LB8 373 aa12.47□□□□□ -0.41
CIRBP-228ENST00000590347 DEFB126Q9BYW3 111 aa12.47□□□□□ -0.41
CIRBP-228ENST00000590347 H3BTX0 84 aa12.46□□□□□ -0.41
CIRBP-228ENST00000590347 CCL4P13236 92 aa12.46□□□□□ -0.41
CIRBP-228ENST00000590347 NRN1LQ496H8 165 aa12.46□□□□□ -0.41
CIRBP-228ENST00000590347 OR8A1Q8NGG7 326 aa12.46□□□□□ -0.41
CIRBP-228ENST00000590347 CEP192Q8TEP8 1941 aa12.46□□□□□ -0.41
CIRBP-228ENST00000590347 FCGR2BP31994 310 aaPredicted RBP12.46□□□□□ -0.41
CIRBP-228ENST00000590347 K7EQM0 130 aa12.46□□□□□ -0.42
CIRBP-228ENST00000590347 F2RL2O00254 374 aa12.46□□□□□ -0.42
CIRBP-228ENST00000590347 INSL3P51460 131 aa12.46□□□□□ -0.42
CIRBP-228ENST00000590347 LRRC29Q8WV35 223 aa12.46□□□□□ -0.42
CIRBP-228ENST00000590347 TMUB1Q9BVT8 246 aa12.46□□□□□ -0.42
CIRBP-228ENST00000590347 LY6G6EA0A0G2JKS1 128 aa12.45□□□□□ -0.42
CIRBP-228ENST00000590347 CELA3AP09093 270 aa12.45□□□□□ -0.42
CIRBP-228ENST00000590347 SRYQ05066 204 aa12.45□□□□□ -0.42
CIRBP-228ENST00000590347 WFDC2Q14508 124 aa12.45□□□□□ -0.42
CIRBP-228ENST00000590347 SAP25Q8TEE9 199 aa12.45□□□□□ -0.42
CIRBP-228ENST00000590347 ZNF503Q96F45 646 aa12.45□□□□□ -0.42
CIRBP-228ENST00000590347 MAP1LC3CQ9BXW4 147 aa12.45□□□□□ -0.42
CIRBP-228ENST00000590347 U3KQA8 63 aa12.45□□□□□ -0.42
CIRBP-228ENST00000590347 GAGE12HA6NDE8 117 aa12.45□□□□□ -0.42
CIRBP-228ENST00000590347 PYYP10082 97 aa12.45□□□□□ -0.42
CIRBP-228ENST00000590347 ADAMTSL5Q6ZMM2 481 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms