RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 HOXB5P09067 269 aa17.84■□□□□ 0.45
LSM7-203ENST00000585409 EXOSC2Q13868 293 aaKnown RBP17.84■□□□□ 0.45
LSM7-203ENST00000585409 C15orf32Q32M92 178 aa17.84■□□□□ 0.45
LSM7-203ENST00000585409 ZNF114Q8NC26 417 aa17.84■□□□□ 0.45
LSM7-203ENST00000585409 MITD1Q8WV92 249 aa17.84■□□□□ 0.45
LSM7-203ENST00000585409 HIPK2Q9H2X6 1198 aa17.84■□□□□ 0.45
LSM7-203ENST00000585409 HUWE1Q7Z6Z7 4374 aaKnown RBP17.84■□□□□ 0.45
LSM7-203ENST00000585409 LINC01619G3V211 115 aa17.83■□□□□ 0.44
LSM7-203ENST00000585409 ZP3P21754 424 aa17.83■□□□□ 0.44
LSM7-203ENST00000585409 ZNF343Q6P1L6 599 aa17.83■□□□□ 0.44
LSM7-203ENST00000585409 NRARPQ7Z6K4 114 aa17.83■□□□□ 0.44
LSM7-203ENST00000585409 ZNF431Q8TF32 576 aaPredicted RBP17.83■□□□□ 0.44
LSM7-203ENST00000585409 FANCD2OSQ96PS1 177 aa17.83■□□□□ 0.44
LSM7-203ENST00000585409 PEF1Q9UBV8 284 aaKnown RBP17.83■□□□□ 0.44
LSM7-203ENST00000585409 FAM90A26D6RGX4 464 aa17.82■□□□□ 0.44
LSM7-203ENST00000585409 CORTO00230 105 aa17.82■□□□□ 0.44
LSM7-203ENST00000585409 PRAF2O60831 178 aa17.82■□□□□ 0.44
LSM7-203ENST00000585409 MED6O75586 246 aa17.82■□□□□ 0.44
LSM7-203ENST00000585409 IL5P05113 134 aa17.82■□□□□ 0.44
LSM7-203ENST00000585409 DEFB136Q30KP8 78 aa17.82■□□□□ 0.44
LSM7-203ENST00000585409 GGNBP1Q5YKI7 109 aa17.82■□□□□ 0.44
LSM7-203ENST00000585409 NOXA1Q86UR1 476 aa17.82■□□□□ 0.44
LSM7-203ENST00000585409 PRR25Q96S07 402 aa17.82■□□□□ 0.44
LSM7-203ENST00000585409 HEYLQ9NQ87 328 aaPredicted RBP17.82■□□□□ 0.44
LSM7-203ENST00000585409 SACSQ9NZJ4 4579 aa17.82■□□□□ 0.44
LSM7-203ENST00000585409 TRBV7-1A0A0A6YYK4 115 aa17.81■□□□□ 0.44
LSM7-203ENST00000585409 FHL3Q13643 280 aa17.81■□□□□ 0.44
LSM7-203ENST00000585409 SPINK9Q5DT21 86 aa17.81■□□□□ 0.44
LSM7-203ENST00000585409 VN1R17PQ8TDU5 208 aa17.81■□□□□ 0.44
LSM7-203ENST00000585409 HSPB7Q9UBY9 170 aa17.81■□□□□ 0.44
LSM7-203ENST00000585409 DNAH7Q8WXX0 4024 aa17.81■□□□□ 0.44
LSM7-203ENST00000585409 INMT-MINDY4F8WBC2 141 aa17.8■□□□□ 0.44
LSM7-203ENST00000585409 NDUFB8O95169 186 aa17.8■□□□□ 0.44
LSM7-203ENST00000585409 LY86O95711 162 aa17.8■□□□□ 0.44
LSM7-203ENST00000585409 HTR2BP41595 481 aa17.8■□□□□ 0.44
LSM7-203ENST00000585409 TNFRSF9Q07011 255 aa17.8■□□□□ 0.44
LSM7-203ENST00000585409 C9orf66Q5T8R8 295 aa17.8■□□□□ 0.44
LSM7-203ENST00000585409 C19orf35Q6ZS72 473 aa17.8■□□□□ 0.44
LSM7-203ENST00000585409 ANKRD34BA5PLL1 514 aa17.79■□□□□ 0.44
LSM7-203ENST00000585409 PTTG1O95997 202 aa17.79■□□□□ 0.44
LSM7-203ENST00000585409 TATDN3Q17R31 274 aa17.79■□□□□ 0.44
LSM7-203ENST00000585409 C12orf45Q8N5I9 185 aaPredicted RBP17.79■□□□□ 0.44
LSM7-203ENST00000585409 OR52B4Q8NGK2 314 aa17.79■□□□□ 0.44
LSM7-203ENST00000585409 ATP6V0BQ99437 205 aa17.79■□□□□ 0.44
LSM7-203ENST00000585409 GAR1Q9NY12 217 aaKnown RBP17.79■□□□□ 0.44
LSM7-203ENST00000585409 TENM2Q9NT68 2774 aa17.79■□□□□ 0.44
LSM7-203ENST00000585409 EPPK1P58107 5090 aaKnown RBP17.78■□□□□ 0.44
LSM7-203ENST00000585409 IGHV4OR15-8A0A075B7B6 117 aa17.78■□□□□ 0.44
LSM7-203ENST00000585409 A0A087WW49 117 aa17.78■□□□□ 0.44
LSM7-203ENST00000585409 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.78■□□□□ 0.44
LSM7-203ENST00000585409 ATP5IP56385 69 aaPredicted RBP17.78■□□□□ 0.44
LSM7-203ENST00000585409 DEFA5Q01523 94 aa17.78■□□□□ 0.44
LSM7-203ENST00000585409 MISP3Q96FF7 219 aa17.78■□□□□ 0.44
LSM7-203ENST00000585409 ASCL2Q99929 193 aa17.78■□□□□ 0.44
LSM7-203ENST00000585409 SEC22CQ9BRL7 303 aa17.78■□□□□ 0.44
LSM7-203ENST00000585409 PITX3O75364 302 aa17.77■□□□□ 0.44
LSM7-203ENST00000585409 ADAP1O75689 374 aa17.77■□□□□ 0.44
LSM7-203ENST00000585409 CASC10Q5T4H9 136 aa17.77■□□□□ 0.44
LSM7-203ENST00000585409 UXS1Q8NBZ7 420 aa17.77■□□□□ 0.44
LSM7-203ENST00000585409 DTD1Q8TEA8 209 aa17.77■□□□□ 0.44
LSM7-203ENST00000585409 CIB3Q96Q77 187 aaPredicted RBP17.77■□□□□ 0.44
LSM7-203ENST00000585409 MARVELD1Q9BSK0 173 aa17.77■□□□□ 0.44
LSM7-203ENST00000585409 SNRPGP15A8MWD9 76 aa17.76■□□□□ 0.43
LSM7-203ENST00000585409 NXPH3O95157 252 aa17.76■□□□□ 0.43
LSM7-203ENST00000585409 RPEL1Q2QD12 228 aa17.76■□□□□ 0.43
LSM7-203ENST00000585409 SLC24A4Q8NFF2 622 aa17.76■□□□□ 0.43
LSM7-203ENST00000585409 U3KQ87 197 aa17.76■□□□□ 0.43
LSM7-203ENST00000585409 BIRC6Q9NR09 4857 aa17.75■□□□□ 0.43
LSM7-203ENST00000585409 WRBO00258 174 aa17.75■□□□□ 0.43
LSM7-203ENST00000585409 GGCTO75223 188 aaKnown RBP17.75■□□□□ 0.43
LSM7-203ENST00000585409 RPP30P78346 268 aaKnown RBP17.75■□□□□ 0.43
LSM7-203ENST00000585409 MUC7Q8TAX7 377 aa17.75■□□□□ 0.43
LSM7-203ENST00000585409 RBKSQ9H477 322 aa17.75■□□□□ 0.43
LSM7-203ENST00000585409 C21orf62Q9NYP8 219 aa17.75■□□□□ 0.43
LSM7-203ENST00000585409 SORL1Q92673 2214 aa17.74■□□□□ 0.43
LSM7-203ENST00000585409 RPS10-NUDT3A0A1W2PQS6 291 aa17.74■□□□□ 0.43
LSM7-203ENST00000585409 SEC14L6B5MCN3 397 aa17.74■□□□□ 0.43
LSM7-203ENST00000585409 OVOL1O14753 267 aa17.74■□□□□ 0.43
LSM7-203ENST00000585409 SCGB2A1O75556 95 aa17.74■□□□□ 0.43
LSM7-203ENST00000585409 IFNA10P01566 189 aa17.74■□□□□ 0.43
LSM7-203ENST00000585409 RNASE2P10153 161 aaKnown RBP17.74■□□□□ 0.43
LSM7-203ENST00000585409 ARL3P36405 182 aa17.74■□□□□ 0.43
LSM7-203ENST00000585409 IAH1Q2TAA2 248 aaPredicted RBP17.74■□□□□ 0.43
LSM7-203ENST00000585409 C2orf83Q53S99 150 aa17.74■□□□□ 0.43
LSM7-203ENST00000585409 CLEC19AQ6UXS0 136 aa17.74■□□□□ 0.43
LSM7-203ENST00000585409 ZNF502Q8TBZ5 544 aa17.74■□□□□ 0.43
LSM7-203ENST00000585409 DMRT1Q9Y5R6 373 aa17.74■□□□□ 0.43
LSM7-203ENST00000585409 MFSD2BA6NFX1 497 aa17.73■□□□□ 0.43
LSM7-203ENST00000585409 NPY1RP25929 384 aa17.73■□□□□ 0.43
LSM7-203ENST00000585409 NKX2-1P43699 371 aaPredicted RBP17.73■□□□□ 0.43
LSM7-203ENST00000585409 MFAP2P55001 183 aa17.73■□□□□ 0.43
LSM7-203ENST00000585409 MFAP4P55083 255 aa17.73■□□□□ 0.43
LSM7-203ENST00000585409 BSXQ3C1V8 233 aa17.73■□□□□ 0.43
LSM7-203ENST00000585409 RNASEH2CQ8TDP1 164 aaKnown RBP17.73■□□□□ 0.43
LSM7-203ENST00000585409 PINX1Q96BK5 328 aaKnown RBP17.73■□□□□ 0.43
LSM7-203ENST00000585409 TXN2Q99757 166 aa17.73■□□□□ 0.43
LSM7-203ENST00000585409 ZNF256Q9Y2P7 627 aaPredicted RBP17.73■□□□□ 0.43
LSM7-203ENST00000585409 C5orf51A6NDU8 294 aa17.72■□□□□ 0.43
LSM7-203ENST00000585409 SYNGR2O43760 224 aa17.72■□□□□ 0.43
LSM7-203ENST00000585409 MT-CO2P00403 227 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms