RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 RNF114Q9Y508 228 aa8.62□□□□□ -1.03
TOP3A-216ENST00000583804 PLXNB1O43157 2135 aa8.61□□□□□ -1.03
TOP3A-216ENST00000583804 TRAV41A0A0B4J266 112 aa8.61□□□□□ -1.03
TOP3A-216ENST00000583804 IGSF23A1L1A6 192 aa8.61□□□□□ -1.03
TOP3A-216ENST00000583804 G3V318 75 aa8.61□□□□□ -1.03
TOP3A-216ENST00000583804 IGF1P05019 195 aa8.61□□□□□ -1.03
TOP3A-216ENST00000583804 METTL15P1P0C7V9 234 aa8.61□□□□□ -1.03
TOP3A-216ENST00000583804 EGR2P11161 476 aaPredicted RBP8.61□□□□□ -1.03
TOP3A-216ENST00000583804 AREGP15514 252 aa8.61□□□□□ -1.03
TOP3A-216ENST00000583804 PVALBP20472 110 aaPredicted RBP8.61□□□□□ -1.03
TOP3A-216ENST00000583804 PAX9P55771 341 aa8.61□□□□□ -1.03
TOP3A-216ENST00000583804 PRCDQ00LT1 54 aa8.61□□□□□ -1.03
TOP3A-216ENST00000583804 DEFA5Q01523 94 aa8.61□□□□□ -1.03
TOP3A-216ENST00000583804 EIF5AL1Q6IS14 154 aaKnown RBP8.61□□□□□ -1.03
TOP3A-216ENST00000583804 OR5B3Q8NH48 314 aa8.61□□□□□ -1.03
TOP3A-216ENST00000583804 MARC2Q969Z3 335 aa8.61□□□□□ -1.03
TOP3A-216ENST00000583804 SAT2Q96F10 170 aaPredicted RBP8.61□□□□□ -1.03
TOP3A-216ENST00000583804 A0A1B0GUS0 222 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 LOC105371267A0A1B0GV96 52 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 TMEM89A2RUT3 159 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 PSMB11A5LHX3 300 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 E5RGE8 158 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 MED6O75586 246 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 CST7O76096 145 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 IFNA10P01566 189 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 OR13C7P0DN81 318 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 SLC35B1P78383 322 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 OR8G2PQ6IF36 304 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 ZNF329Q86UD4 541 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 ZNF429Q86V71 674 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 KLHDC1Q8N7A1 406 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 TMEM217Q8N7C4 229 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 OR5T1Q8NG75 326 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 OR1S2Q8NGQ3 325 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 C11orf1Q9H5F2 150 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 ZNF257Q9Y2Q1 563 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 ATRQ13535 2644 aa8.6□□□□□ -1.03
TOP3A-216ENST00000583804 TNCP24821 2201 aa8.59□□□□□ -1.03
TOP3A-216ENST00000583804 A0A1W2PN81 502 aa8.59□□□□□ -1.03
TOP3A-216ENST00000583804 TEX22C9J3V5 150 aa8.59□□□□□ -1.03
TOP3A-216ENST00000583804 FAM90A26D6RGX4 464 aa8.59□□□□□ -1.03
TOP3A-216ENST00000583804 PRH1P02810 166 aa8.59□□□□□ -1.03
TOP3A-216ENST00000583804 RPL12P30050 165 aaKnown RBP8.59□□□□□ -1.03
TOP3A-216ENST00000583804 CHRNA7P36544 502 aa8.59□□□□□ -1.03
TOP3A-216ENST00000583804 RPL23AP62750 156 aaKnown RBP8.59□□□□□ -1.03
TOP3A-216ENST00000583804 NHLH2Q02577 135 aa8.59□□□□□ -1.03
TOP3A-216ENST00000583804 WT1-ASQ06250 92 aa8.59□□□□□ -1.03
TOP3A-216ENST00000583804 AKIRIN2Q53H80 203 aa8.59□□□□□ -1.03
TOP3A-216ENST00000583804 IL34Q6ZMJ4 242 aa8.59□□□□□ -1.03
TOP3A-216ENST00000583804 OR2C3Q8N628 320 aa8.59□□□□□ -1.03
TOP3A-216ENST00000583804 HIPK2Q9H2X6 1198 aa8.59□□□□□ -1.03
TOP3A-216ENST00000583804 NDUFA4L2Q9NRX3 87 aa8.59□□□□□ -1.03
TOP3A-216ENST00000583804 ZNF355PQ9NSJ1 428 aa8.59□□□□□ -1.03
TOP3A-216ENST00000583804 IGHV3-21A0A0B4J1V1 117 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 IGLC7A0M8Q6 106 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 IGHV3-48P01763 117 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 PROK1P58294 105 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 EWSR1Q01844 656 aaKnown RBP eCLIP8.58□□□□□ -1.04
TOP3A-216ENST00000583804 CLINT1Q14677 625 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 AARDQ4LEZ3 155 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 AWAT1Q58HT5 328 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 ASPHD1Q5U4P2 390 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 C10orf99Q6UWK7 81 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 MRPL41Q8IXM3 137 aaKnown RBP8.58□□□□□ -1.04
TOP3A-216ENST00000583804 TMEM252Q8N6L7 170 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 SLC24A4Q8NFF2 622 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 BPIFCQ8NFQ6 507 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 OR5AU1Q8NGC0 362 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 OR52E5Q8NH55 327 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 SMIM8Q96KF7 97 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 TMEM68Q96MH6 324 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 RAB40CQ96S21 281 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 WNT10AQ9GZT5 417 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 ARV1Q9H2C2 271 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 ZNF580Q9UK33 172 aa8.58□□□□□ -1.04
TOP3A-216ENST00000583804 C15orf62A8K5M9 175 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 JTBO76095 146 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 OR8U8P0C7N1 319 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 PF4V1P10720 104 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 DEFA4P12838 97 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 NPY1RP25929 384 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 PPIFP30405 207 aaKnown RBP8.57□□□□□ -1.04
TOP3A-216ENST00000583804 P2RY1P47900 373 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 SULT1A2P50226 295 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 CRIP2P52943 208 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-216ENST00000583804 ERHP84090 104 aaKnown RBP8.57□□□□□ -1.04
TOP3A-216ENST00000583804 ARL16Q0P5N6 197 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 C10orf91Q5T1B1 145 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 TEX38Q6PEX7 206 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 HAPLN4Q86UW8 402 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 C11orf44Q8N8P7 122 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 TMEM170AQ8WVE7 144 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 TMED6Q8WW62 240 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 MISP3Q96FF7 219 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 MS4A10Q96PG2 267 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 SRSF8Q9BRL6 282 aaKnown RBP8.57□□□□□ -1.04
TOP3A-216ENST00000583804 LYRM2Q9NU23 88 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-216ENST00000583804 FBXL17Q9UF56 701 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 CACFD1Q9UGQ2 172 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 STRAPQ9Y3F4 350 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms