RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 HAPLN4Q86UW8 402 aa15.71■□□□□ 0.11
SRSF1-206ENST00000583741 TEX45Q8NA69 505 aa15.71■□□□□ 0.11
SRSF1-206ENST00000583741 KIAA1456Q9P272 454 aa15.71■□□□□ 0.11
SRSF1-206ENST00000583741 LSM5Q9Y4Y9 91 aaKnown RBP15.71■□□□□ 0.11
SRSF1-206ENST00000583741 TRAV14DV4A0A0A6YYC5 116 aa15.71■□□□□ 0.1
SRSF1-206ENST00000583741 A0A1W2PN81 502 aa15.71■□□□□ 0.1
SRSF1-206ENST00000583741 FAM90A26D6RGX4 464 aa15.71■□□□□ 0.1
SRSF1-206ENST00000583741 RRHO14718 337 aa15.71■□□□□ 0.1
SRSF1-206ENST00000583741 HNRNPCP07910 306 aaKnown RBP eCLIP15.71■□□□□ 0.1
SRSF1-206ENST00000583741 LGALS1P09382 135 aaKnown RBP15.71■□□□□ 0.1
SRSF1-206ENST00000583741 CHRNA7P36544 502 aa15.71■□□□□ 0.1
SRSF1-206ENST00000583741 ADAMTSL5Q6ZMM2 481 aa15.71■□□□□ 0.1
SRSF1-206ENST00000583741 NPBQ8NG41 125 aa15.71■□□□□ 0.1
SRSF1-206ENST00000583741 QTRT1Q9BXR0 403 aaKnown RBP15.71■□□□□ 0.1
SRSF1-206ENST00000583741 PRNDQ9UKY0 176 aa15.71■□□□□ 0.1
SRSF1-206ENST00000583741 BOLA2-SMG1P6H3BVE0 249 aa15.7■□□□□ 0.1
SRSF1-206ENST00000583741 K7EPK0 472 aa15.7■□□□□ 0.1
SRSF1-206ENST00000583741 NDUFA3O95167 84 aa15.7■□□□□ 0.1
SRSF1-206ENST00000583741 CRYGBP07316 175 aa15.7■□□□□ 0.1
SRSF1-206ENST00000583741 IGHV4-30-4P0DP06 118 aa15.7■□□□□ 0.1
SRSF1-206ENST00000583741 RPL8P62917 257 aaKnown RBP15.7■□□□□ 0.1
SRSF1-206ENST00000583741 ID3Q02535 119 aa15.7■□□□□ 0.1
SRSF1-206ENST00000583741 PLGLAQ15195 96 aa15.7■□□□□ 0.1
SRSF1-206ENST00000583741 AARDQ4LEZ3 155 aa15.7■□□□□ 0.1
SRSF1-206ENST00000583741 THAP6Q8TBB0 222 aa15.7■□□□□ 0.1
SRSF1-206ENST00000583741 MAGT1Q9H0U3 335 aa15.7■□□□□ 0.1
SRSF1-206ENST00000583741 FBXL15Q9H469 300 aa15.7■□□□□ 0.1
SRSF1-206ENST00000583741 TMEM14BQ9NUH8 114 aa15.7■□□□□ 0.1
SRSF1-206ENST00000583741 HSPB7Q9UBY9 170 aa15.7■□□□□ 0.1
SRSF1-206ENST00000583741 FOXA2Q9Y261 457 aaPredicted RBP15.7■□□□□ 0.1
SRSF1-206ENST00000583741 PLECQ15149 4684 aaKnown RBP15.69■□□□□ 0.1
SRSF1-206ENST00000583741 WRBO00258 174 aa15.69■□□□□ 0.1
SRSF1-206ENST00000583741 CRIP2P52943 208 aaPredicted RBP15.69■□□□□ 0.1
SRSF1-206ENST00000583741 TNFRSF9Q07011 255 aa15.69■□□□□ 0.1
SRSF1-206ENST00000583741 PPP1R27Q86WC6 154 aa15.69■□□□□ 0.1
SRSF1-206ENST00000583741 Q8N1Y9 231 aa15.69■□□□□ 0.1
SRSF1-206ENST00000583741 ZNF430Q9H8G1 570 aaPredicted RBP15.69■□□□□ 0.1
SRSF1-206ENST00000583741 FKBP11Q9NYL4 201 aa15.69■□□□□ 0.1
SRSF1-206ENST00000583741 MBD2Q9UBB5 411 aa15.69■□□□□ 0.1
SRSF1-206ENST00000583741 CACFD1Q9UGQ2 172 aa15.69■□□□□ 0.1
SRSF1-206ENST00000583741 RCL1Q9Y2P8 373 aaKnown RBP15.69■□□□□ 0.1
SRSF1-206ENST00000583741 TNCP24821 2201 aa15.68■□□□□ 0.1
SRSF1-206ENST00000583741 IFNA17P01571 189 aa15.68■□□□□ 0.1
SRSF1-206ENST00000583741 IGHV3-11P01762 117 aa15.68■□□□□ 0.1
SRSF1-206ENST00000583741 RLN2P04090 185 aa15.68■□□□□ 0.1
SRSF1-206ENST00000583741 POLR2GP62487 172 aaKnown RBP eCLIP15.68■□□□□ 0.1
SRSF1-206ENST00000583741 PRSS54Q6PEW0 395 aa15.68■□□□□ 0.1
SRSF1-206ENST00000583741 MMD2Q8IY49 270 aa15.68■□□□□ 0.1
SRSF1-206ENST00000583741 OR51B2Q9Y5P1 312 aa15.68■□□□□ 0.1
SRSF1-206ENST00000583741 FXYD6-FXYD2A0A087WZ82 144 aa15.67■□□□□ 0.1
SRSF1-206ENST00000583741 H0YIZ8 118 aa15.67■□□□□ 0.1
SRSF1-206ENST00000583741 SYNGR2O43760 224 aa15.67■□□□□ 0.1
SRSF1-206ENST00000583741 SSSCA1O60232 199 aa15.67■□□□□ 0.1
SRSF1-206ENST00000583741 DEDDO75618 318 aa15.67■□□□□ 0.1
SRSF1-206ENST00000583741 FGF2P09038 288 aa15.67■□□□□ 0.1
SRSF1-206ENST00000583741 EGR2P11161 476 aaPredicted RBP15.67■□□□□ 0.1
SRSF1-206ENST00000583741 CX3CL1P78423 397 aa15.67■□□□□ 0.1
SRSF1-206ENST00000583741 PRSS8Q16651 343 aa15.67■□□□□ 0.1
SRSF1-206ENST00000583741 NOXA1Q86UR1 476 aa15.67■□□□□ 0.1
SRSF1-206ENST00000583741 OR52E5Q8NH55 327 aa15.67■□□□□ 0.1
SRSF1-206ENST00000583741 HYLS1Q96M11 299 aa15.67■□□□□ 0.1
SRSF1-206ENST00000583741 COMMD5Q9GZQ3 224 aa15.67■□□□□ 0.1
SRSF1-206ENST00000583741 C19orf73Q9NVV2 129 aa15.67■□□□□ 0.1
SRSF1-206ENST00000583741 OR5AC2Q9NZP5 309 aa15.67■□□□□ 0.1
SRSF1-206ENST00000583741 ZNF257Q9Y2Q1 563 aa15.67■□□□□ 0.1
SRSF1-206ENST00000583741 MED6O75586 246 aa15.66■□□□□ 0.1
SRSF1-206ENST00000583741 SLC25A4P12235 298 aa15.66■□□□□ 0.1
SRSF1-206ENST00000583741 SPCS3P61009 180 aa15.66■□□□□ 0.1
SRSF1-206ENST00000583741 HSPE1P61604 102 aaKnown RBP15.66■□□□□ 0.1
SRSF1-206ENST00000583741 PJVKQ0ZLH3 352 aa15.66■□□□□ 0.1
SRSF1-206ENST00000583741 MRGPRG-AS1Q2M3A8 158 aa15.66■□□□□ 0.1
SRSF1-206ENST00000583741 OR11H4Q8NGC9 324 aa15.66■□□□□ 0.1
SRSF1-206ENST00000583741 OR4C12Q96R67 309 aa15.66■□□□□ 0.1
SRSF1-206ENST00000583741 CLCC1Q96S66 551 aa15.66■□□□□ 0.1
SRSF1-206ENST00000583741 RNF126Q9BV68 326 aa15.66■□□□□ 0.1
SRSF1-206ENST00000583741 RBKSQ9H477 322 aa15.66■□□□□ 0.1
SRSF1-206ENST00000583741 CEBPZOSA8MTT3 80 aa15.65■□□□□ 0.1
SRSF1-206ENST00000583741 FCN1O00602 326 aa15.65■□□□□ 0.1
SRSF1-206ENST00000583741 ACTL6BO94805 426 aa15.65■□□□□ 0.1
SRSF1-206ENST00000583741 MYOD1P15172 320 aa15.65■□□□□ 0.1
SRSF1-206ENST00000583741 PVALBP20472 110 aaPredicted RBP15.65■□□□□ 0.1
SRSF1-206ENST00000583741 MAS1LP35410 378 aa15.65■□□□□ 0.1
SRSF1-206ENST00000583741 OR5B3Q8NH48 314 aa15.65■□□□□ 0.1
SRSF1-206ENST00000583741 TEX50A0A1B0GTY4 177 aa15.65■□□□□ 0.1
SRSF1-206ENST00000583741 E5RGE8 158 aa15.65■□□□□ 0.1
SRSF1-206ENST00000583741 L7N2F9 121 aa15.65■□□□□ 0.1
SRSF1-206ENST00000583741 HSPB1P04792 205 aaKnown RBP15.65■□□□□ 0.1
SRSF1-206ENST00000583741 VAMP2P63027 116 aa15.65■□□□□ 0.1
SRSF1-206ENST00000583741 TNXAQ16473 311 aa15.65■□□□□ 0.1
SRSF1-206ENST00000583741 SPINK9Q5DT21 86 aa15.65■□□□□ 0.1
SRSF1-206ENST00000583741 MS4A10Q96PG2 267 aa15.65■□□□□ 0.1
SRSF1-206ENST00000583741 RAB40CQ96S21 281 aa15.65■□□□□ 0.1
SRSF1-206ENST00000583741 FAM103A1Q9BTL3 118 aaKnown RBP15.65■□□□□ 0.1
SRSF1-206ENST00000583741 A8MZ25 164 aa15.64■□□□□ 0.09
SRSF1-206ENST00000583741 CA2P00918 260 aa15.64■□□□□ 0.09
SRSF1-206ENST00000583741 IGLV1-51P01701 117 aa15.64■□□□□ 0.09
SRSF1-206ENST00000583741 EIF2B2P49770 351 aaKnown RBP15.64■□□□□ 0.09
SRSF1-206ENST00000583741 ZNF546Q86UE3 836 aa15.64■□□□□ 0.09
SRSF1-206ENST00000583741 OR1L8Q8NGR8 309 aa15.64■□□□□ 0.09
SRSF1-206ENST00000583741 GRPEL2Q8TAA5 225 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms