RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 FNDC10F2Z333 226 aa11.16□□□□□ -0.62
RNF43-205ENST00000581868 ZNF253O75346 499 aa11.16□□□□□ -0.62
RNF43-205ENST00000581868 IGHV3-48P01763 117 aa11.16□□□□□ -0.62
RNF43-205ENST00000581868 GPX1P07203 203 aa11.16□□□□□ -0.62
RNF43-205ENST00000581868 BRS3P32247 399 aa11.16□□□□□ -0.62
RNF43-205ENST00000581868 AMTP48728 403 aa11.16□□□□□ -0.62
RNF43-205ENST00000581868 RPL19P84098 196 aaKnown RBP11.16□□□□□ -0.62
RNF43-205ENST00000581868 STUMQ69YW2 141 aa11.16□□□□□ -0.62
RNF43-205ENST00000581868 FAM169BQ8N8A8 192 aa11.16□□□□□ -0.62
RNF43-205ENST00000581868 SLC35E1Q96K37 410 aa11.16□□□□□ -0.62
RNF43-205ENST00000581868 OSTCQ9NRP0 149 aa11.16□□□□□ -0.62
RNF43-205ENST00000581868 ZNF257Q9Y2Q1 563 aa11.16□□□□□ -0.62
RNF43-205ENST00000581868 C8orf88P0DMB2 117 aa11.15□□□□□ -0.62
RNF43-205ENST00000581868 RNASE2P10153 161 aaKnown RBP11.15□□□□□ -0.62
RNF43-205ENST00000581868 SRIP30626 198 aa11.15□□□□□ -0.62
RNF43-205ENST00000581868 TIMM23BQ5SRD1 257 aa11.15□□□□□ -0.62
RNF43-205ENST00000581868 CYB5R2Q6BCY4 276 aa11.15□□□□□ -0.62
RNF43-205ENST00000581868 WDR73Q6P4I2 378 aa11.15□□□□□ -0.62
RNF43-205ENST00000581868 IGFL2Q6UWQ7 119 aa11.15□□□□□ -0.62
RNF43-205ENST00000581868 SLC25A33Q9BSK2 321 aa11.15□□□□□ -0.62
RNF43-205ENST00000581868 SSBP3Q9BWW4 388 aaPredicted RBP11.15□□□□□ -0.62
RNF43-205ENST00000581868 SMG1Q96Q15 3661 aaKnown RBP11.15□□□□□ -0.62
RNF43-205ENST00000581868 IGLV2-8P01709 118 aa11.15□□□□□ -0.62
RNF43-205ENST00000581868 IGHV1-46P01743 117 aa11.15□□□□□ -0.62
RNF43-205ENST00000581868 OR5G3P0C626 314 aa11.15□□□□□ -0.62
RNF43-205ENST00000581868 REG1BP48304 166 aa11.15□□□□□ -0.62
RNF43-205ENST00000581868 COMPP49747 757 aaPredicted RBP11.15□□□□□ -0.62
RNF43-205ENST00000581868 C2orf83Q53S99 150 aa11.15□□□□□ -0.62
RNF43-205ENST00000581868 FAM222BQ8WU58 562 aa11.15□□□□□ -0.62
RNF43-205ENST00000581868 ZNF586Q9NXT0 402 aa11.15□□□□□ -0.62
RNF43-205ENST00000581868 ARL2-SNX15V9GYD0 113 aa11.15□□□□□ -0.62
RNF43-205ENST00000581868 ARFGEF3Q5TH69 2177 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 DIRC3C9JPN6 131 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 CHRNB4P30926 498 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 UBE2L3P68036 154 aaKnown RBP11.14□□□□□ -0.63
RNF43-205ENST00000581868 SLC25A48Q6ZT89 311 aaKnown RBP11.14□□□□□ -0.63
RNF43-205ENST00000581868 FAM168AQ92567 244 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 NCOR1P1Q9H4R4 102 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 NRN1Q9NPD7 142 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 RPUSD1Q9UJJ7 312 aaKnown RBP11.14□□□□□ -0.63
RNF43-205ENST00000581868 PLCE1Q9P212 2302 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 A0A1W2PS18 150 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 MBD3L4A6NDZ8 208 aaPredicted RBP11.14□□□□□ -0.63
RNF43-205ENST00000581868 MBD3L3A6NE82 208 aaPredicted RBP11.14□□□□□ -0.63
RNF43-205ENST00000581868 MBD3L5A6NJ08 208 aaPredicted RBP11.14□□□□□ -0.63
RNF43-205ENST00000581868 ISLRO14498 428 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 MT-ND6P03923 174 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 RPLP1P05386 114 aaKnown RBP11.14□□□□□ -0.63
RNF43-205ENST00000581868 PPOXP50336 477 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 SELENOVP59797 346 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 SSBP2P81877 361 aaPredicted RBP11.14□□□□□ -0.63
RNF43-205ENST00000581868 CD69Q07108 199 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 MBD3L2Q8NHZ7 208 aaPredicted RBP11.14□□□□□ -0.63
RNF43-205ENST00000581868 HARBI1Q96MB7 349 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 COMMD5Q9GZQ3 224 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 DSCAML1Q8TD84 2053 aa11.14□□□□□ -0.63
RNF43-205ENST00000581868 IGLV3-9A0A075B6K5 115 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 SPAARA0A1B0GVQ0 90 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 AMY1AP04745 511 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 PYYP10082 97 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 C22orf34Q6ZV56 151 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 FAM19A2Q8N3H0 131 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 IGF2BP2-AS1Q96M15 143 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 MRPL20Q9BYC9 149 aaKnown RBP11.13□□□□□ -0.63
RNF43-205ENST00000581868 CDC42EP3Q9UKI2 254 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 TRAV34A0A0B4J273 112 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 A0A1W2PRE2 83 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 E7EUB6 86 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 M0QZK8 103 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 BMPR1BO00238 502 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 GATA4P43694 442 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 CCL8P80075 99 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 ZNF788Q6ZQV5 615 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 OR5B3Q8NH48 314 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 SLC25A2Q9BXI2 301 aa11.13□□□□□ -0.63
RNF43-205ENST00000581868 DEFB124Q8NES8 71 aa11.12□□□□□ -0.63
RNF43-205ENST00000581868 OR1L8Q8NGR8 309 aa11.12□□□□□ -0.63
RNF43-205ENST00000581868 KCNS1Q96KK3 526 aa11.12□□□□□ -0.63
RNF43-205ENST00000581868 C19orf24Q9BVV8 132 aa11.12□□□□□ -0.63
RNF43-205ENST00000581868 DNAJC4Q9NNZ3 241 aa11.12□□□□□ -0.63
RNF43-205ENST00000581868 BET1LQ9NYM9 111 aa11.12□□□□□ -0.63
RNF43-205ENST00000581868 LAMA5O15230 3695 aa11.12□□□□□ -0.63
RNF43-205ENST00000581868 RAI1Q7Z5J4 1906 aaPredicted RBP11.12□□□□□ -0.63
RNF43-205ENST00000581868 TANC2Q9HCD6 1990 aa11.12□□□□□ -0.63
RNF43-205ENST00000581868 SMIM27A0A1W2PRY6 76 aa11.12□□□□□ -0.63
RNF43-205ENST00000581868 APCSP02743 223 aa11.12□□□□□ -0.63
RNF43-205ENST00000581868 CCL3L1P16619 93 aa11.12□□□□□ -0.63
RNF43-205ENST00000581868 NTF3P20783 257 aa11.12□□□□□ -0.63
RNF43-205ENST00000581868 USF1P22415 310 aaPredicted RBP11.12□□□□□ -0.63
RNF43-205ENST00000581868 ERHP84090 104 aaKnown RBP11.12□□□□□ -0.63
RNF43-205ENST00000581868 FAM27E3Q08E93 113 aa11.12□□□□□ -0.63
RNF43-205ENST00000581868 OR10J3Q5JRS4 329 aa11.12□□□□□ -0.63
RNF43-205ENST00000581868 ZCCHC24Q8N2G6 241 aaKnown RBP11.12□□□□□ -0.63
RNF43-205ENST00000581868 FAM167A-AS1Q96KT0 104 aa11.12□□□□□ -0.63
RNF43-205ENST00000581868 hADV38S2A0JD32 116 aa11.11□□□□□ -0.63
RNF43-205ENST00000581868 C10orf55Q5SWW7 151 aa11.11□□□□□ -0.63
RNF43-205ENST00000581868 PRR27Q6MZM9 219 aa11.11□□□□□ -0.63
RNF43-205ENST00000581868 Q8N976 141 aa11.11□□□□□ -0.63
RNF43-205ENST00000581868 ZNF331Q9NQX6 463 aaPredicted RBP11.11□□□□□ -0.63
RNF43-205ENST00000581868 ZNF355PQ9NSJ1 428 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms