RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 MRPS10P82664 201 aaKnown RBP12.98□□□□□ -0.33
SMG6-214ENST00000573827 SP6Q3SY56 376 aa12.98□□□□□ -0.33
SMG6-214ENST00000573827 SPINK9Q5DT21 86 aa12.98□□□□□ -0.33
SMG6-214ENST00000573827 Q6ZRM9 215 aa12.98□□□□□ -0.33
SMG6-214ENST00000573827 OR52B4Q8NGK2 314 aa12.98□□□□□ -0.33
SMG6-214ENST00000573827 LHFPL5Q8TAF8 219 aa12.98□□□□□ -0.33
SMG6-214ENST00000573827 OR10C1Q96KK4 312 aa12.98□□□□□ -0.33
SMG6-214ENST00000573827 FAM110AQ9BQ89 295 aa12.98□□□□□ -0.33
SMG6-214ENST00000573827 SLIRPQ9GZT3 109 aaKnown RBP12.98□□□□□ -0.33
SMG6-214ENST00000573827 C15orf62A8K5M9 175 aa12.97□□□□□ -0.33
SMG6-214ENST00000573827 RGS5O15539 181 aa12.97□□□□□ -0.33
SMG6-214ENST00000573827 ST8SIA3O43173 380 aa12.97□□□□□ -0.33
SMG6-214ENST00000573827 IGHV3-48P01763 117 aa12.97□□□□□ -0.33
SMG6-214ENST00000573827 Q56UQ5 140 aa12.97□□□□□ -0.33
SMG6-214ENST00000573827 TXN2Q99757 166 aa12.97□□□□□ -0.33
SMG6-214ENST00000573827 SPAG8Q99932 426 aaPredicted RBP12.97□□□□□ -0.33
SMG6-214ENST00000573827 CDS2O95674 445 aa12.96□□□□□ -0.33
SMG6-214ENST00000573827 BSXQ3C1V8 233 aa12.96□□□□□ -0.33
SMG6-214ENST00000573827 ODF3L2Q3SX64 289 aa12.96□□□□□ -0.33
SMG6-214ENST00000573827 SCGB2B2Q4G0G5 96 aa12.96□□□□□ -0.33
SMG6-214ENST00000573827 ZFAND6Q6FIF0 208 aa12.96□□□□□ -0.33
SMG6-214ENST00000573827 UBAC2Q8NBM4 344 aa12.96□□□□□ -0.33
SMG6-214ENST00000573827 OR4C16Q8NGL9 310 aa12.96□□□□□ -0.33
SMG6-214ENST00000573827 ZFAND1Q8TCF1 268 aa12.96□□□□□ -0.33
SMG6-214ENST00000573827 GLYATL2Q8WU03 294 aa12.96□□□□□ -0.33
SMG6-214ENST00000573827 MISP3Q96FF7 219 aa12.96□□□□□ -0.33
SMG6-214ENST00000573827 NXF2Q9GZY0 626 aaKnown RBP12.96□□□□□ -0.33
SMG6-214ENST00000573827 TMEM222Q9H0R3 208 aa12.96□□□□□ -0.33
SMG6-214ENST00000573827 GAR1Q9NY12 217 aaKnown RBP12.96□□□□□ -0.33
SMG6-214ENST00000573827 COPZ2Q9P299 210 aa12.96□□□□□ -0.33
SMG6-214ENST00000573827 SMPXQ9UHP9 88 aa12.96□□□□□ -0.33
SMG6-214ENST00000573827 H3BMQ9 156 aa12.95□□□□□ -0.34
SMG6-214ENST00000573827 ZNF207O43670 478 aaKnown RBP12.95□□□□□ -0.34
SMG6-214ENST00000573827 RNASE2P10153 161 aaKnown RBP12.95□□□□□ -0.34
SMG6-214ENST00000573827 MFAP4P55083 255 aa12.95□□□□□ -0.34
SMG6-214ENST00000573827 MEF2DQ14814 521 aa12.95□□□□□ -0.34
SMG6-214ENST00000573827 SURF2Q15527 256 aaPredicted RBP12.95□□□□□ -0.34
SMG6-214ENST00000573827 ANKRD55Q3KP44 614 aa12.95□□□□□ -0.34
SMG6-214ENST00000573827 RBPMS2Q6ZRY4 209 aaKnown RBP12.95□□□□□ -0.34
SMG6-214ENST00000573827 CCDC71LQ8N9Z2 235 aa12.95□□□□□ -0.34
SMG6-214ENST00000573827 C20orf24Q9BUV8 137 aa12.95□□□□□ -0.34
SMG6-214ENST00000573827 MRPL36Q9P0J6 103 aaKnown RBP12.95□□□□□ -0.34
SMG6-214ENST00000573827 GPR132Q9UNW8 380 aa12.95□□□□□ -0.34
SMG6-214ENST00000573827 GSTZ1O43708 216 aaPredicted RBP12.94□□□□□ -0.34
SMG6-214ENST00000573827 B3GALNT1O75752 331 aa12.94□□□□□ -0.34
SMG6-214ENST00000573827 OR5AC1P0C628 307 aa12.94□□□□□ -0.34
SMG6-214ENST00000573827 RPL5P46777 297 aaKnown RBP12.94□□□□□ -0.34
SMG6-214ENST00000573827 AKR1C2P52895 323 aa12.94□□□□□ -0.34
SMG6-214ENST00000573827 ERHP84090 104 aaKnown RBP12.94□□□□□ -0.34
SMG6-214ENST00000573827 DIRAS2Q96HU8 199 aa12.94□□□□□ -0.34
SMG6-214ENST00000573827 GGTLC1Q9BX51 225 aa12.94□□□□□ -0.34
SMG6-214ENST00000573827 NAA60Q9H7X0 242 aa12.94□□□□□ -0.34
SMG6-214ENST00000573827 BIRC6Q9NR09 4857 aa12.94□□□□□ -0.34
SMG6-214ENST00000573827 IGHV7-4-1A0A0J9YVY3 117 aa12.93□□□□□ -0.34
SMG6-214ENST00000573827 ANKRD20A5PA0PJZ0 165 aa12.93□□□□□ -0.34
SMG6-214ENST00000573827 CHEK1O14757 476 aa12.93□□□□□ -0.34
SMG6-214ENST00000573827 NUPL2O15504 423 aaKnown RBP12.93□□□□□ -0.34
SMG6-214ENST00000573827 ETV6P41212 452 aa12.93□□□□□ -0.34
SMG6-214ENST00000573827 TRIM16LQ309B1 348 aa12.93□□□□□ -0.34
SMG6-214ENST00000573827 FAM90A2PQ658T7 463 aa12.93□□□□□ -0.34
SMG6-214ENST00000573827 TMEM230Q96A57 120 aa12.93□□□□□ -0.34
SMG6-214ENST00000573827 RNF2Q99496 336 aa12.93□□□□□ -0.34
SMG6-214ENST00000573827 OVOL2Q9BRP0 275 aa12.93□□□□□ -0.34
SMG6-214ENST00000573827 FNDC4Q9H6D8 234 aaPredicted RBP12.93□□□□□ -0.34
SMG6-214ENST00000573827 RABL2AQ9UBK7 228 aaPredicted RBP12.93□□□□□ -0.34
SMG6-214ENST00000573827 RABL2BQ9UNT1 228 aa12.93□□□□□ -0.34
SMG6-214ENST00000573827 LOC102724200A0A096LPH7 203 aaPredicted RBP12.92□□□□□ -0.34
SMG6-214ENST00000573827 TEX13DA0A0J9YY54 714 aaPredicted RBP12.92□□□□□ -0.34
SMG6-214ENST00000573827 LCE6AA0A183 80 aa12.92□□□□□ -0.34
SMG6-214ENST00000573827 CRYM-AS1A6NIL9 109 aa12.92□□□□□ -0.34
SMG6-214ENST00000573827 AKAIN1P0CW23 69 aa12.92□□□□□ -0.34
SMG6-214ENST00000573827 TNFSF8P32971 234 aa12.92□□□□□ -0.34
SMG6-214ENST00000573827 RELQ04864 619 aaPredicted RBP12.92□□□□□ -0.34
SMG6-214ENST00000573827 IL18Q14116 193 aa12.92□□□□□ -0.34
SMG6-214ENST00000573827 TOMM20LQ6UXN7 152 aa12.92□□□□□ -0.34
SMG6-214ENST00000573827 SELENOHQ8IZQ5 122 aaKnown RBP12.92□□□□□ -0.34
SMG6-214ENST00000573827 LILRB2Q8N423 598 aa12.92□□□□□ -0.34
SMG6-214ENST00000573827 PINX1Q96BK5 328 aaKnown RBP12.92□□□□□ -0.34
SMG6-214ENST00000573827 RHPN1-AS1Q9BWJ2 59 aa12.92□□□□□ -0.34
SMG6-214ENST00000573827 ZFAND3Q9H8U3 227 aa12.92□□□□□ -0.34
SMG6-214ENST00000573827 DISC1C4P0D8 188 aa12.91□□□□□ -0.34
SMG6-214ENST00000573827 ATG12O94817 140 aa12.91□□□□□ -0.34
SMG6-214ENST00000573827 FAM219AQ8IW50 185 aa12.91□□□□□ -0.34
SMG6-214ENST00000573827 SLC35G3Q8N808 338 aa12.91□□□□□ -0.34
SMG6-214ENST00000573827 OR51S1Q8NGJ8 323 aa12.91□□□□□ -0.34
SMG6-214ENST00000573827 OR52E5Q8NH55 327 aa12.91□□□□□ -0.34
SMG6-214ENST00000573827 UBQLN2Q9UHD9 624 aa12.91□□□□□ -0.34
SMG6-214ENST00000573827 TMEM56-RWDD3S4R434 201 aa12.91□□□□□ -0.34
SMG6-214ENST00000573827 VPS13DQ5THJ4 4388 aa12.91□□□□□ -0.34
SMG6-214ENST00000573827 IGHV3-49A0A0A0MS15 119 aa12.9□□□□□ -0.34
SMG6-214ENST00000573827 A0A1B0GU03 582 aa12.9□□□□□ -0.34
SMG6-214ENST00000573827 TMEM50AO95807 157 aa12.9□□□□□ -0.34
SMG6-214ENST00000573827 IFNA17P01571 189 aa12.9□□□□□ -0.34
SMG6-214ENST00000573827 MLANAQ16655 118 aa12.9□□□□□ -0.34
SMG6-214ENST00000573827 LAMTOR1Q6IAA8 161 aa12.9□□□□□ -0.34
SMG6-214ENST00000573827 TMEM116Q8NCL8 245 aa12.9□□□□□ -0.34
SMG6-214ENST00000573827 TMEM170AQ8WVE7 144 aa12.9□□□□□ -0.34
SMG6-214ENST00000573827 RBPMSQ93062 196 aaKnown RBP12.9□□□□□ -0.34
SMG6-214ENST00000573827 GPR146Q96CH1 333 aa12.9□□□□□ -0.34
SMG6-214ENST00000573827 RRNAD1Q96FB5 475 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms