RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SSTP61278 116 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 C10orf55Q5SWW7 151 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 C16orf82Q7Z2V1 217 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 TVP23CQ96ET8 276 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 RNF2Q99496 336 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 RSG1Q9BU20 258 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 ZNF430Q9H8G1 570 aaPredicted RBP8.25□□□□□ -1.09
SMG6-213ENST00000573166 TECRQ9NZ01 308 aaKnown RBP8.25□□□□□ -1.09
SMG6-213ENST00000573166 SETD2Q9BYW2 2564 aaPredicted RBP8.25□□□□□ -1.09
SMG6-213ENST00000573166 H0YJW9 148 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 AP4M1O00189 453 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 PITX3O75364 302 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 FGF8P55075 233 aaPredicted RBP8.25□□□□□ -1.09
SMG6-213ENST00000573166 ATP5IP56385 69 aaPredicted RBP8.25□□□□□ -1.09
SMG6-213ENST00000573166 FAM106AQ4KMX7 169 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 FAM24BQ8N5W8 94 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 C11orf44Q8N8P7 122 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 BEND2Q8NDZ0 799 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 EEF1AKMT3Q96AZ1 226 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 A0A0G2JLM5 398 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 CBY3A6NI87 242 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 C15orf61A6NNL5 157 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 IGHV3-11P01762 117 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 HIST1H1BP16401 226 aaKnown RBP8.24□□□□□ -1.09
SMG6-213ENST00000573166 FHITP49789 147 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 TMEM249Q2WGJ8 235 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 WFDC3Q8IUB2 231 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 ZNF439Q8NDP4 499 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 WNT10AQ9GZT5 417 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 MPDU1O75352 247 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 IGHV3-23P01764 117 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 VDAC2P45880 294 aaPredicted RBP8.24□□□□□ -1.09
SMG6-213ENST00000573166 RPEL1Q2QD12 228 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 MST1LQ2TV78 715 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 TIGITQ495A1 244 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 LINC00518Q8N0U6 118 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 SLC35B3Q9H1N7 401 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 CHD3Q12873 2000 aaKnown RBP8.24□□□□□ -1.09
SMG6-213ENST00000573166 C20orf202A1L168 122 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 SNRPCP09234 159 aaKnown RBP8.24□□□□□ -1.09
SMG6-213ENST00000573166 OR9G9P0C7N8 305 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 PSG5Q15238 335 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 PXMP4Q9Y6I8 212 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 PF4P02776 101 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 IGKV1-16P04430 117 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 SLC25A5P05141 298 aaKnown RBP8.24□□□□□ -1.09
SMG6-213ENST00000573166 RAB4AP20338 218 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 MAS1LP35410 378 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 SUPT4H1P63272 117 aaKnown RBP8.24□□□□□ -1.09
SMG6-213ENST00000573166 PAFAH1B2P68402 229 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 ZNF345Q14585 488 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 TPPP3Q9BW30 176 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 HIGD1AQ9Y241 93 aa8.24□□□□□ -1.09
SMG6-213ENST00000573166 ADAMTS20P59510 1910 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 NCKAP5O14513 1909 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 TRAV30A0A087WSZ9 112 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 J3QLI3 93 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 ITGB1BP1O14713 200 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 EIF3GO75821 320 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMG6-213ENST00000573166 C5orf64Q2M2E5 130 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 TMEM18Q96B42 140 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 BET1LQ9NYM9 111 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 WNK1Q9H4A3 2382 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 A0A1W2PRX2 142 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 C15orf65H3BRN8 121 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 FABP9Q0Z7S8 132 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 PRSS8Q16651 343 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 MIC13Q5XKP0 118 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 IL17RELQ6ZVW7 336 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 TAF15Q92804 592 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMG6-213ENST00000573166 TXN2Q99757 166 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 TMEM204Q9BSN7 226 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 C21orf62Q9NYP8 219 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 A0A1W2PPQ1 181 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 SH2D7A6NKC9 451 aaPredicted RBP8.23□□□□□ -1.09
SMG6-213ENST00000573166 PHOX2AO14813 284 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 C18orf12Q96KH6 178 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 METTL26Q96S19 204 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 RNF5Q99942 180 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 TMPRSS5Q9H3S3 457 aa8.23□□□□□ -1.09
SMG6-213ENST00000573166 MYO15AQ9UKN7 3530 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 BMPR1BO00238 502 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 SIAH2O43255 324 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 CNN1P51911 297 aaKnown RBP8.22□□□□□ -1.09
SMG6-213ENST00000573166 ZNF429Q86V71 674 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 MTORP42345 2549 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 WIPF3A6NGB9 483 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 H0YIZ8 118 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 GPR183P32249 361 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 TFPI2P48307 235 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 MEOX2P50222 304 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 LYPD6Q86Y78 171 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 NECAP1Q8NC96 275 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 AQP10Q96PS8 301 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 EXPH5Q8NEV8 1989 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 SERF2P84101 59 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 OR10W1Q8NGF6 305 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 TMEM167BQ9NRX6 74 aa8.22□□□□□ -1.09
SMG6-213ENST00000573166 IGHV3OR16-13A0A075B7E8 117 aa8.21□□□□□ -1.09
SMG6-213ENST00000573166 IGHV3-74A0A0B4J1X5 117 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms