RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 ZNF436Q9C0F3 470 aaPredicted RBP6.56□□□□□ -1.36
SMG6-210ENST00000572205 MRPL36Q9P0J6 103 aaKnown RBP6.56□□□□□ -1.36
SMG6-210ENST00000572205 RYR2Q92736 4967 aa6.56□□□□□ -1.36
SMG6-210ENST00000572205 C2orf70A6NJV1 201 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 DISC1C4P0D8 188 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 RNASE2P10153 161 aaKnown RBP6.55□□□□□ -1.36
SMG6-210ENST00000572205 GP9P14770 177 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 FCGR2BP31994 310 aaPredicted RBP6.55□□□□□ -1.36
SMG6-210ENST00000572205 GPR183P32249 361 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 HSPE1P61604 102 aaKnown RBP6.55□□□□□ -1.36
SMG6-210ENST00000572205 DHODHQ02127 395 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 SPINK9Q5DT21 86 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 CLEC19AQ6UXS0 136 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 GPHB5Q86YW7 130 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 CCDC71LQ8N9Z2 235 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 OR1P1Q8NH06 330 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 ZFAND1Q8TCF1 268 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 VN1R17PQ8TDU5 208 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 SCARB1Q8WTV0 552 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 TMEM190Q8WZ59 177 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 RBPMSQ93062 196 aaKnown RBP6.55□□□□□ -1.36
SMG6-210ENST00000572205 TSC22D3Q99576 134 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 FNDC4Q9H6D8 234 aaPredicted RBP6.55□□□□□ -1.36
SMG6-210ENST00000572205 COPZ2Q9P299 210 aa6.55□□□□□ -1.36
SMG6-210ENST00000572205 TRBV7-1A0A0A6YYK4 115 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 TEX13DA0A0J9YY54 714 aaPredicted RBP6.54□□□□□ -1.36
SMG6-210ENST00000572205 CCDC160A6NGH7 325 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 TGOLN2O43493 480 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 GGCTO75223 188 aaKnown RBP6.54□□□□□ -1.36
SMG6-210ENST00000572205 B3GALNT1O75752 331 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 OR2C1O95371 312 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 C8orf88P0DMB2 117 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 ARL3P36405 182 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 RPEL1Q2QD12 228 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 ANKRD55Q3KP44 614 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 PYDC2Q56P42 97 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 H2BFWTQ7Z2G1 175 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 WFDC3Q8IUB2 231 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 SLC35G3Q8N808 338 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 DEDD2Q8WXF8 326 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 IL22RA2Q969J5 263 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 EEF1AKMT3Q96AZ1 226 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 GPR146Q96CH1 333 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 ATP6V0BQ99437 205 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 C19orf73Q9NVV2 129 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 MLXQ9UH92 298 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 TENM2Q9NT68 2774 aa6.54□□□□□ -1.36
SMG6-210ENST00000572205 DNAH1Q9P2D7 4330 aa6.53□□□□□ -1.36
SMG6-210ENST00000572205 IGHV3-21A0A0B4J1V1 117 aa6.53□□□□□ -1.36
SMG6-210ENST00000572205 ZNF785A8K8V0 405 aa6.53□□□□□ -1.36
SMG6-210ENST00000572205 PRSS47A8MTI9 375 aa6.53□□□□□ -1.36
SMG6-210ENST00000572205 A8MZ25 164 aa6.53□□□□□ -1.36
SMG6-210ENST00000572205 PITX3O75364 302 aa6.53□□□□□ -1.36
SMG6-210ENST00000572205 SNAPC5O75971 98 aa6.53□□□□□ -1.36
SMG6-210ENST00000572205 CTSGP08311 255 aa6.53□□□□□ -1.36
SMG6-210ENST00000572205 IL7P13232 177 aa6.53□□□□□ -1.36
SMG6-210ENST00000572205 AKR1C2P52895 323 aa6.53□□□□□ -1.36
SMG6-210ENST00000572205 CD300EQ496F6 205 aaPredicted RBP6.53□□□□□ -1.36
SMG6-210ENST00000572205 FAM219AQ8IW50 185 aa6.53□□□□□ -1.36
SMG6-210ENST00000572205 LRTM2Q8N967 370 aa6.53□□□□□ -1.36
SMG6-210ENST00000572205 CXorf58Q96LI9 332 aa6.53□□□□□ -1.36
SMG6-210ENST00000572205 FKBP11Q9NYL4 201 aa6.53□□□□□ -1.36
SMG6-210ENST00000572205 CACNG5Q9UF02 275 aa6.53□□□□□ -1.36
SMG6-210ENST00000572205 C14orf166Q9Y224 244 aaKnown RBP6.53□□□□□ -1.36
SMG6-210ENST00000572205 IGHV3-35A0A0C4DH35 117 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 OR2T8A6NH00 312 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 PLA2G10O15496 165 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 DHFRP00374 187 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 MT-CO2P00403 227 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 CLEC3BP05452 202 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 FOLR2P14207 255 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 S100GP29377 79 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 CCR6P51684 374 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 PPP1R1AQ13522 171 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 TRIM16LQ309B1 348 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 DEFB114Q30KQ6 69 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 TMEM268Q5VZI3 342 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 TEPPQ6URK8 271 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 LINC00322Q6ZN03 302 aaPredicted RBP6.52□□□□□ -1.37
SMG6-210ENST00000572205 LYZL2Q7Z4W2 148 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 TMEM61Q8N0U2 210 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 TOMM5Q8N4H5 51 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 OR52E5Q8NH55 327 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 OR4A16Q8NH70 328 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 BSCL2Q96G97 398 aaPredicted RBP6.52□□□□□ -1.37
SMG6-210ENST00000572205 OR10C1Q96KK4 312 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 HINT2Q9BX68 163 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 WFDC10AQ9H1F0 79 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 PLEKHA3Q9HB20 300 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 MCUBQ9NWR8 336 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 C21orf62Q9NYP8 219 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 HSPB7Q9UBY9 170 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 SCP2D1Q9UJQ7 156 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 SELENOKQ9Y6D0 94 aa6.52□□□□□ -1.37
SMG6-210ENST00000572205 A0A0B4J2A0 478 aa6.51□□□□□ -1.37
SMG6-210ENST00000572205 J3KRW8 73 aa6.51□□□□□ -1.37
SMG6-210ENST00000572205 SCAF4O95104 1147 aaKnown RBP6.51□□□□□ -1.37
SMG6-210ENST00000572205 NDUFB6O95139 128 aa6.51□□□□□ -1.37
SMG6-210ENST00000572205 NXPH3O95157 252 aa6.51□□□□□ -1.37
SMG6-210ENST00000572205 IGHV3-48P01763 117 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms