RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 GFOD1Q9NXC2 390 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 EHFQ9NZC4 300 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 SLC7A11Q9UPY5 501 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 TRGV10A0A0A0MS01 117 aa8.45□□□□□ -1.06
CDH3-208ENST00000569036 A0A0A6YYD4 124 aa8.45□□□□□ -1.06
CDH3-208ENST00000569036 IGHV3-72A0A0B4J1Y9 119 aa8.45□□□□□ -1.06
CDH3-208ENST00000569036 HSPB1P04792 205 aaKnown RBP8.45□□□□□ -1.06
CDH3-208ENST00000569036 DUSP1P28562 367 aa8.45□□□□□ -1.06
CDH3-208ENST00000569036 BAXQ07812 192 aa8.45□□□□□ -1.06
CDH3-208ENST00000569036 SOHLH1Q5JUK2 328 aa8.45□□□□□ -1.06
CDH3-208ENST00000569036 STX12Q86Y82 276 aa8.45□□□□□ -1.06
CDH3-208ENST00000569036 ZNF573Q86YE8 665 aa8.45□□□□□ -1.06
CDH3-208ENST00000569036 LGI3Q8N145 548 aa8.45□□□□□ -1.06
CDH3-208ENST00000569036 SUMF2Q8NBJ7 301 aa8.45□□□□□ -1.06
CDH3-208ENST00000569036 OR9G1Q8NH87 305 aa8.45□□□□□ -1.06
CDH3-208ENST00000569036 SECTM1Q8WVN6 248 aa8.45□□□□□ -1.06
CDH3-208ENST00000569036 FLYWCH2Q96CP2 140 aaKnown RBP8.45□□□□□ -1.06
CDH3-208ENST00000569036 GNPNAT1Q96EK6 184 aaPredicted RBP8.45□□□□□ -1.06
CDH3-208ENST00000569036 CHST5Q9GZS9 411 aa8.45□□□□□ -1.06
CDH3-208ENST00000569036 NAA60Q9H7X0 242 aa8.45□□□□□ -1.06
CDH3-208ENST00000569036 DNAH5Q8TE73 4624 aa8.45□□□□□ -1.06
CDH3-208ENST00000569036 ST8SIA3O43173 380 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 PITX3O75364 302 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 CRTAPO75718 401 aaPredicted RBP8.44□□□□□ -1.06
CDH3-208ENST00000569036 OR2C1O95371 312 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 GABRR1P24046 479 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 MTCP1P56278 107 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 TMEM50BP56557 158 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 OR2B11Q5JQS5 317 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 KRBOX4Q5JUW0 171 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 GGNBP1Q5YKI7 109 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 OR2T10Q8NGZ9 312 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 SPSB1Q96BD6 273 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 ARHGAP5-AS1Q96IT6 56 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 PFDN5Q99471 154 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 GGACTQ9BVM4 153 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 PECRQ9BY49 303 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 EIF5A2Q9GZV4 153 aaKnown RBP8.44□□□□□ -1.06
CDH3-208ENST00000569036 SLC25A31Q9H0C2 315 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 OR6C3Q9NZP0 311 aa8.44□□□□□ -1.06
CDH3-208ENST00000569036 TRAV1-1A0A0B4J248 108 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 FAM230AA0A1W2PPH8 454 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 C9JQL5 133 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 J3QR06 171 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 MGST3O14880 152 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 SOCS1O15524 211 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 CD7P09564 240 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 HIST1H1BP16401 226 aaKnown RBP8.43□□□□□ -1.06
CDH3-208ENST00000569036 OR3A1P47881 315 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 PKIAP61925 76 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 GNMTQ14749 295 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 SLC22A6Q4U2R8 563 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 MOB3BQ86TA1 216 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 WFDC3Q8IUB2 231 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 OR8B12Q8NGG6 310 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 OR51T1Q8NGJ9 327 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 CORO2AQ92828 525 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 GPER1Q99527 375 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 NICN1Q9BSH3 213 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 GPR173Q9NS66 373 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 GSKIPQ9P0R6 139 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 RNF150Q9ULK6 438 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 V9GYS6 101 aa8.43□□□□□ -1.06
CDH3-208ENST00000569036 IGHV1-3A0A0C4DH29 117 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 OR11H12B2RN74 326 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 TSTD3H0UI37 97 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 PPP1R2P9O14990 202 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 ATP6V0E1O15342 81 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 TXNL1O43396 289 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 HAND1O96004 215 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 IGHV3-11P01762 117 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 IGHV3-7P01780 117 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 PRH1P02810 166 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 NQO2P16083 231 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 TAGLN2P37802 199 aaKnown RBP8.42□□□□□ -1.06
CDH3-208ENST00000569036 CEACAM6P40199 344 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 GLIPR1P48060 266 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 RBP2P50120 134 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 TMEM187Q14656 261 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 Q3ZCU0 254 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 KHDC3LQ587J8 217 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 ZNF506Q5JVG8 444 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 FAM219AQ8IW50 185 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 ZNF645Q8N7E2 425 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 TMEM104Q8NE00 496 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 OR14K1Q8NGZ2 314 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 OR51E1Q8TCB6 317 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 EDARADDQ8WWZ3 215 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 LEAP2Q969E1 77 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 IL36GQ9NZH8 169 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 IL36RNQ9UBH0 155 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 ANXA10Q9UJ72 324 aa8.42□□□□□ -1.06
CDH3-208ENST00000569036 TRAV41A0A0B4J266 112 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 RBFOX3A6NFN3 312 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 HSD17B6O14756 317 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 SOX15O60248 233 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 DHRS3O75911 302 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 RBMY1A1P0DJD3 496 aaKnown RBP8.41□□□□□ -1.06
CDH3-208ENST00000569036 BLVRBP30043 206 aaPredicted RBP8.41□□□□□ -1.06
CDH3-208ENST00000569036 RND2P52198 227 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms