RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 AKR1C2P52895 323 aa8.41□□□□□ -1.06
CDH3-206ENST00000567674 SPCS2Q15005 226 aa8.41□□□□□ -1.06
CDH3-206ENST00000567674 DUSP18Q8NEJ0 188 aa8.41□□□□□ -1.06
CDH3-206ENST00000567674 RBPMSQ93062 196 aaKnown RBP8.41□□□□□ -1.06
CDH3-206ENST00000567674 GALNT14Q96FL9 552 aa8.41□□□□□ -1.06
CDH3-206ENST00000567674 TP53RKQ96S44 253 aa8.41□□□□□ -1.06
CDH3-206ENST00000567674 HINT2Q9BX68 163 aa8.41□□□□□ -1.06
CDH3-206ENST00000567674 SLIRPQ9GZT3 109 aaKnown RBP8.41□□□□□ -1.06
CDH3-206ENST00000567674 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.41□□□□□ -1.06
CDH3-206ENST00000567674 MLXQ9UH92 298 aa8.41□□□□□ -1.06
CDH3-206ENST00000567674 GPR132Q9UNW8 380 aa8.41□□□□□ -1.06
CDH3-206ENST00000567674 TMEM56-RWDD3S4R434 201 aa8.41□□□□□ -1.06
CDH3-206ENST00000567674 TRAV30A0A087WSZ9 112 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 A0A0B4J293 547 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 LCE6AA0A183 80 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 OR2T8A6NH00 312 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 F8W735 103 aaPredicted RBP8.4□□□□□ -1.06
CDH3-206ENST00000567674 UBE2CO00762 179 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 FAUP35544 74 aaKnown RBP8.4□□□□□ -1.06
CDH3-206ENST00000567674 MFAP2P55001 183 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 AP3S2P59780 193 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 SPCS3P61009 180 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 IL18Q14116 193 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 BSXQ3C1V8 233 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 CASC10Q5T4H9 136 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 UNQ9165/PRO28630Q6UXU0 137 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 HAPLN4Q86UW8 402 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 TMEM61Q8N0U2 210 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 OR52B4Q8NGK2 314 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 OR13C8Q8NGS7 320 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 GINS3Q9BRX5 216 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 RTBDNQ9BSG5 229 aaPredicted RBP8.4□□□□□ -1.06
CDH3-206ENST00000567674 EDA2RQ9HAV5 297 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 TP53TG1Q9Y2A0 90 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 NSG2Q9Y328 171 aa8.4□□□□□ -1.06
CDH3-206ENST00000567674 TRAV2A0A0B4J234 112 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 KIR2DL5BA0A0G2JN68 375 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 KIR2DL5BA0A0G2JPC4 375 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 FABP12A6NFH5 140 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 OR4C46A6NHA9 309 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 CRYM-AS1A6NIL9 109 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 DBX1A6NMT0 343 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 H3BMQ9 156 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 IFNA17P01571 189 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 IGKV1-5P01602 117 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 IGHV3-23P01764 117 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 CD7P09564 240 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 LYL1P12980 280 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 ATF4P18848 351 aaPredicted RBP8.39□□□□□ -1.07
CDH3-206ENST00000567674 HTR2BP41595 481 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 SRPXP78539 464 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 GUCA2BQ16661 112 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 TRIM16LQ309B1 348 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 SCGB2B2Q4G0G5 96 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 TM4SF20Q53R12 229 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 Q56UQ5 140 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 C19orf35Q6ZS72 473 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 KIR2DL5AQ8N109 375 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 SLC35G3Q8N808 338 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 KIR2DL5BQ8NHK3 375 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 MARCH1Q8TCQ1 289 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 GLYATL2Q8WU03 294 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 WDR89Q96FK6 387 aaPredicted RBP8.39□□□□□ -1.07
CDH3-206ENST00000567674 HIPK2Q9H2X6 1198 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 NAA60Q9H7X0 242 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 ENY2Q9NPA8 101 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 SMPXQ9UHP9 88 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 TENM2Q9NT68 2774 aa8.39□□□□□ -1.07
CDH3-206ENST00000567674 DYNC2H1Q8NCM8 4307 aaKnown RBP8.38□□□□□ -1.07
CDH3-206ENST00000567674 LOC102724200A0A096LPH7 203 aaPredicted RBP8.38□□□□□ -1.07
CDH3-206ENST00000567674 TRAV14DV4A0A0A6YYC5 116 aa8.38□□□□□ -1.07
CDH3-206ENST00000567674 DUXBA0A1W2PPF3 345 aa8.38□□□□□ -1.07
CDH3-206ENST00000567674 RPS10-NUDT3A0A1W2PQS6 291 aa8.38□□□□□ -1.07
CDH3-206ENST00000567674 GNG7O60262 68 aa8.38□□□□□ -1.07
CDH3-206ENST00000567674 MT-CO2P00403 227 aa8.38□□□□□ -1.07
CDH3-206ENST00000567674 ANXA3P12429 323 aa8.38□□□□□ -1.07
CDH3-206ENST00000567674 ADMP35318 185 aa8.38□□□□□ -1.07
CDH3-206ENST00000567674 PAFAH1B2P68402 229 aa8.38□□□□□ -1.07
CDH3-206ENST00000567674 Q6ZWC4 215 aa8.38□□□□□ -1.07
CDH3-206ENST00000567674 WFDC3Q8IUB2 231 aa8.38□□□□□ -1.07
CDH3-206ENST00000567674 OR4D10Q8NGI6 311 aa8.38□□□□□ -1.07
CDH3-206ENST00000567674 OR4C16Q8NGL9 310 aa8.38□□□□□ -1.07
CDH3-206ENST00000567674 OR4X1Q8NH49 305 aa8.38□□□□□ -1.07
CDH3-206ENST00000567674 RNASEH2CQ8TDP1 164 aaKnown RBP8.38□□□□□ -1.07
CDH3-206ENST00000567674 C6orf62Q9GZU0 229 aaPredicted RBP8.38□□□□□ -1.07
CDH3-206ENST00000567674 TMEM231Q9H6L2 316 aa8.38□□□□□ -1.07
CDH3-206ENST00000567674 A0A0B4J2A0 478 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 IGHV7-4-1A0A0J9YVY3 117 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 A0A1W2PS18 150 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 ST8SIA3O43173 380 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 SLC25A4P12235 298 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 TNFSF8P32971 234 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 APOC4P55056 127 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 C2orf83Q53S99 150 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 ETFRF1Q6IPR1 90 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 BTNL8Q6UX41 500 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 ZNF600Q6ZNG1 722 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 DEFB125Q8N687 156 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 MCFD2Q8NI22 146 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 MISP3Q96FF7 219 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms