RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 TNFRSF14Q92956 283 aa18.92■□□□□ 0.62
LINC00543-201ENST00000567234 ST6GALNAC6Q969X2 333 aa18.92■□□□□ 0.62
LINC00543-201ENST00000567234 MRPL20Q9BYC9 149 aaKnown RBP18.92■□□□□ 0.62
LINC00543-201ENST00000567234 BET1LQ9NYM9 111 aa18.92■□□□□ 0.62
LINC00543-201ENST00000567234 RBP4P02753 201 aa18.91■□□□□ 0.62
LINC00543-201ENST00000567234 DTX2Q86UW9 622 aa18.91■□□□□ 0.62
LINC00543-201ENST00000567234 TRAV9-1A0A075B6T8 112 aa18.9■□□□□ 0.62
LINC00543-201ENST00000567234 H0YJW9 148 aa18.9■□□□□ 0.62
LINC00543-201ENST00000567234 UPK2O00526 184 aa18.9■□□□□ 0.62
LINC00543-201ENST00000567234 SOX15O60248 233 aa18.9■□□□□ 0.62
LINC00543-201ENST00000567234 C8orf46Q8TAG6 207 aa18.9■□□□□ 0.62
LINC00543-201ENST00000567234 MIEN1Q9BRT3 115 aa18.9■□□□□ 0.62
LINC00543-201ENST00000567234 PCGF1Q9BSM1 259 aa18.9■□□□□ 0.62
LINC00543-201ENST00000567234 POLR3KQ9Y2Y1 108 aaPredicted RBP18.9■□□□□ 0.62
LINC00543-201ENST00000567234 IGKV1-16P04430 117 aa18.9■□□□□ 0.62
LINC00543-201ENST00000567234 ESDP10768 282 aa18.9■□□□□ 0.62
LINC00543-201ENST00000567234 TMEM249Q2WGJ8 235 aa18.9■□□□□ 0.62
LINC00543-201ENST00000567234 TMEM177Q53S58 311 aa18.9■□□□□ 0.62
LINC00543-201ENST00000567234 TMEM133Q9H2Q1 129 aa18.9■□□□□ 0.62
LINC00543-201ENST00000567234 SLC39A9Q9NUM3 307 aa18.9■□□□□ 0.62
LINC00543-201ENST00000567234 CTXND1A0A1B0GTU2 59 aa18.89■□□□□ 0.61
LINC00543-201ENST00000567234 IL3RAP26951 378 aa18.89■□□□□ 0.61
LINC00543-201ENST00000567234 FOXL1Q12952 345 aa18.89■□□□□ 0.61
LINC00543-201ENST00000567234 PDPNQ86YL7 162 aa18.89■□□□□ 0.61
LINC00543-201ENST00000567234 ABHD12Q8N2K0 398 aa18.89■□□□□ 0.61
LINC00543-201ENST00000567234 RAB1CQ92928 201 aa18.89■□□□□ 0.61
LINC00543-201ENST00000567234 LHX4Q969G2 390 aa18.89■□□□□ 0.61
LINC00543-201ENST00000567234 TIMD4Q96H15 378 aa18.89■□□□□ 0.61
LINC00543-201ENST00000567234 FUT9Q9Y231 359 aa18.89■□□□□ 0.61
LINC00543-201ENST00000567234 SCGB1D1O95968 90 aa18.88■□□□□ 0.61
LINC00543-201ENST00000567234 G0S2P27469 103 aa18.88■□□□□ 0.61
LINC00543-201ENST00000567234 MALRD1Q5VYJ5 2156 aa18.88■□□□□ 0.61
LINC00543-201ENST00000567234 OR8B3Q8NGG8 313 aa18.88■□□□□ 0.61
LINC00543-201ENST00000567234 NEIL1Q96FI4 390 aaPredicted RBP18.88■□□□□ 0.61
LINC00543-201ENST00000567234 OR8B2Q96RD0 313 aa18.88■□□□□ 0.61
LINC00543-201ENST00000567234 NABP2Q9BQ15 211 aa18.88■□□□□ 0.61
LINC00543-201ENST00000567234 ATG101Q9BSB4 218 aa18.88■□□□□ 0.61
LINC00543-201ENST00000567234 ENY2Q9NPA8 101 aa18.88■□□□□ 0.61
LINC00543-201ENST00000567234 OR51B2Q9Y5P1 312 aa18.88■□□□□ 0.61
LINC00543-201ENST00000567234 MYO18BQ8IUG5 2567 aa18.88■□□□□ 0.61
LINC00543-201ENST00000567234 C19orf84I3L1E1 186 aa18.88■□□□□ 0.61
LINC00543-201ENST00000567234 TEX43Q6ZNM6 134 aa18.88■□□□□ 0.61
LINC00543-201ENST00000567234 USP9XQ93008 2570 aaPredicted RBP18.87■□□□□ 0.61
LINC00543-201ENST00000567234 SRRM4A7MD48 611 aaKnown RBP18.87■□□□□ 0.61
LINC00543-201ENST00000567234 C17orf112F2Z3M2 114 aa18.87■□□□□ 0.61
LINC00543-201ENST00000567234 MPDU1O75352 247 aa18.87■□□□□ 0.61
LINC00543-201ENST00000567234 CD1BP29016 333 aa18.87■□□□□ 0.61
LINC00543-201ENST00000567234 RPL15P61313 204 aaKnown RBP18.87■□□□□ 0.61
LINC00543-201ENST00000567234 ZNF709Q8N972 641 aa18.87■□□□□ 0.61
LINC00543-201ENST00000567234 OR4C13Q8NGP0 309 aa18.87■□□□□ 0.61
LINC00543-201ENST00000567234 VSIRQ9H7M9 311 aa18.87■□□□□ 0.61
LINC00543-201ENST00000567234 WDR83OSQ9Y284 106 aa18.87■□□□□ 0.61
LINC00543-201ENST00000567234 FAM208BQ5VWN6 2430 aa18.87■□□□□ 0.61
LINC00543-201ENST00000567234 PRSS46E5RG02 174 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 MC5RP33032 325 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 ATP5IP56385 69 aaPredicted RBP18.86■□□□□ 0.61
LINC00543-201ENST00000567234 TMEM144Q7Z5S9 345 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 OR5B3Q8NH48 314 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 TMEM37Q8WXS4 190 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 FLYWCH2Q96CP2 140 aaKnown RBP18.86■□□□□ 0.61
LINC00543-201ENST00000567234 MS4A10Q96PG2 267 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 TXNDC17Q9BRA2 123 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 NPCDR1Q9BY65 106 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 PARLQ9H300 379 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 PXMP4Q9Y6I8 212 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 A0A1W2PPQ1 181 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 RRHO14718 337 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 SAA1P0DJI8 122 aaPredicted RBP18.86■□□□□ 0.61
LINC00543-201ENST00000567234 PRCDQ00LT1 54 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 OR4A5Q8NH83 315 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 HARBI1Q96MB7 349 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 WASHC3Q9Y3C0 194 aa18.86■□□□□ 0.61
LINC00543-201ENST00000567234 TNCP24821 2201 aa18.85■□□□□ 0.61
LINC00543-201ENST00000567234 PRRX1P54821 245 aa18.85■□□□□ 0.61
LINC00543-201ENST00000567234 TMEM183BQ1AE95 376 aa18.85■□□□□ 0.61
LINC00543-201ENST00000567234 SLC24A4Q8NFF2 622 aa18.85■□□□□ 0.61
LINC00543-201ENST00000567234 PPIAL4CA0A0B4J2A2 164 aa18.84■□□□□ 0.61
LINC00543-201ENST00000567234 PPIAL4GP0DN37 164 aa18.84■□□□□ 0.61
LINC00543-201ENST00000567234 NPY1RP25929 384 aa18.84■□□□□ 0.61
LINC00543-201ENST00000567234 ELLP55199 621 aaPredicted RBP18.84■□□□□ 0.61
LINC00543-201ENST00000567234 YPEL3P61236 119 aaPredicted RBP18.84■□□□□ 0.61
LINC00543-201ENST00000567234 RPS16P62249 146 aaKnown RBP18.84■□□□□ 0.61
LINC00543-201ENST00000567234 SELENOTP62341 195 aa18.84■□□□□ 0.61
LINC00543-201ENST00000567234 LY6G5BQ8NDX9 201 aa18.84■□□□□ 0.61
LINC00543-201ENST00000567234 VSTM2AQ8TAG5 236 aa18.84■□□□□ 0.61
LINC00543-201ENST00000567234 PLEKHA3Q9HB20 300 aa18.84■□□□□ 0.61
LINC00543-201ENST00000567234 IGHV2-26A0A0B4J1V2 119 aa18.83■□□□□ 0.6
LINC00543-201ENST00000567234 PDE6DO43924 150 aa18.83■□□□□ 0.6
LINC00543-201ENST00000567234 IGLV1-47P01700 117 aa18.83■□□□□ 0.6
LINC00543-201ENST00000567234 USF1P22415 310 aaPredicted RBP18.83■□□□□ 0.6
LINC00543-201ENST00000567234 REG1BP48304 166 aa18.83■□□□□ 0.6
LINC00543-201ENST00000567234 TPPP2P59282 170 aa18.83■□□□□ 0.6
LINC00543-201ENST00000567234 ACSM6Q6P461 480 aa18.83■□□□□ 0.6
LINC00543-201ENST00000567234 RPP25LQ8N5L8 163 aaKnown RBP18.83■□□□□ 0.6
LINC00543-201ENST00000567234 TEX50A0A1B0GTY4 177 aa18.82■□□□□ 0.6
LINC00543-201ENST00000567234 FNDC10F2Z333 226 aa18.82■□□□□ 0.6
LINC00543-201ENST00000567234 SSX7Q7RTT5 188 aa18.82■□□□□ 0.6
LINC00543-201ENST00000567234 TMEM167AQ8TBQ9 72 aa18.82■□□□□ 0.6
LINC00543-201ENST00000567234 CLEC7AQ9BXN2 247 aa18.82■□□□□ 0.6
LINC00543-201ENST00000567234 FGF8P55075 233 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms